Basic Information

Insect: Heliconius melpomene
Gene Symbol: -
Assembly: None
Location: Hmel217001o:11426321-11432360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 4 2.8e+02 2.4 0.0 2 17 73 88 73 89 0.86

2 28 7e-05 0.0048 17.4 0.4 1 21 162 182 162 183 0.95

3 28 1.6 1.1e+02 3.7 0.3 3 19 191 206 190 211 0.74

4 28 0.013 0.87 10.3 3.1 1 23 216 239 216 239 0.97

5 28 0.0076 0.53 11.0 0.5 3 23 246 266 245 266 0.96

6 28 0.6 42 5.0 5.6 3 21 271 289 270 290 0.94

7 28 0.00029 0.02 15.4 2.8 2 23 333 355 332 355 0.95

8 28 0.0032 0.22 12.2 0.3 1 23 388 410 388 410 0.98

9 28 0.0009 0.062 13.9 0.6 1 23 416 439 416 439 0.97

10 28 0.00077 0.053 14.1 1.8 2 23 449 471 448 471 0.97

11 28 3.6e-05 0.0025 18.3 0.5 1 21 592 612 592 613 0.95

12 28 0.19 13 6.6 0.4 3 23 646 667 645 667 0.96

13 28 0.0026 0.18 12.4 1.3 2 23 673 694 672 694 0.97

14 28 2.7 1.9e+02 2.9 5.2 1 21 697 717 697 718 0.94

15 28 0.00058 0.04 14.5 0.5 1 23 730 753 730 753 0.93

16 28 0.093 6.5 7.5 3.8 1 23 759 781 759 781 0.95

17 28 2.6 1.8e+02 3.0 0.5 1 23 815 838 815 838 0.87

18 28 9.7e-06 0.00068 20.1 0.7 3 23 845 866 845 867 0.98

19 28 0.00087 0.06 13.9 1.2 2 21 976 995 975 996 0.94

20 28 0.38 26 5.6 0.1 3 23 1003 1024 1002 1024 0.96

21 28 0.13 8.9 7.1 0.6 1 23 1029 1052 1029 1052 0.96

22 28 0.0005 0.035 14.7 0.4 2 23 1058 1079 1057 1079 0.97

23 28 0.35 24 5.7 1.9 2 21 1083 1102 1083 1103 0.92

24 28 1.9e-05 0.0013 19.1 1.4 1 23 1129 1152 1129 1152 0.95

25 28 0.0012 0.085 13.5 0.4 1 23 1158 1180 1158 1180 0.92

26 28 0.092 6.4 7.6 0.1 1 23 1186 1208 1186 1208 0.97

27 28 0.00049 0.034 14.7 0.5 1 23 1214 1237 1214 1237 0.96

28 28 0.00099 0.069 13.8 2.5 2 23 1244 1266 1243 1266 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	4	2.8e+02	2.4	0.0	2	17	73	88	73	89	0.86
2	28	7e-05	0.0048	17.4	0.4	1	21	162	182	162	183	0.95
3	28	1.6	1.1e+02	3.7	0.3	3	19	191	206	190	211	0.74
4	28	0.013	0.87	10.3	3.1	1	23	216	239	216	239	0.97
5	28	0.0076	0.53	11.0	0.5	3	23	246	266	245	266	0.96
6	28	0.6	42	5.0	5.6	3	21	271	289	270	290	0.94
7	28	0.00029	0.02	15.4	2.8	2	23	333	355	332	355	0.95
8	28	0.0032	0.22	12.2	0.3	1	23	388	410	388	410	0.98
9	28	0.0009	0.062	13.9	0.6	1	23	416	439	416	439	0.97
10	28	0.00077	0.053	14.1	1.8	2	23	449	471	448	471	0.97
11	28	3.6e-05	0.0025	18.3	0.5	1	21	592	612	592	613	0.95
12	28	0.19	13	6.6	0.4	3	23	646	667	645	667	0.96
13	28	0.0026	0.18	12.4	1.3	2	23	673	694	672	694	0.97
14	28	2.7	1.9e+02	2.9	5.2	1	21	697	717	697	718	0.94
15	28	0.00058	0.04	14.5	0.5	1	23	730	753	730	753	0.93
16	28	0.093	6.5	7.5	3.8	1	23	759	781	759	781	0.95
17	28	2.6	1.8e+02	3.0	0.5	1	23	815	838	815	838	0.87
18	28	9.7e-06	0.00068	20.1	0.7	3	23	845	866	845	867	0.98
19	28	0.00087	0.06	13.9	1.2	2	21	976	995	975	996	0.94
20	28	0.38	26	5.6	0.1	3	23	1003	1024	1002	1024	0.96
21	28	0.13	8.9	7.1	0.6	1	23	1029	1052	1029	1052	0.96
22	28	0.0005	0.035	14.7	0.4	2	23	1058	1079	1057	1079	0.97
23	28	0.35	24	5.7	1.9	2	21	1083	1102	1083	1103	0.92
24	28	1.9e-05	0.0013	19.1	1.4	1	23	1129	1152	1129	1152	0.95
25	28	0.0012	0.085	13.5	0.4	1	23	1158	1180	1158	1180	0.92
26	28	0.092	6.4	7.6	0.1	1	23	1186	1208	1186	1208	0.97
27	28	0.00049	0.034	14.7	0.5	1	23	1214	1237	1214	1237	0.96
28	28	0.00099	0.069	13.8	2.5	2	23	1244	1266	1243	1266	0.95

Sequence Information

Coding Sequence: ATGACCCGACAAGTCGATGTAAAAGCTCTAGTTTCGCACATAGTGCGCGGAGACGGCGCAAATAAATGCCGAATATGTTTAGGTGATACAACGGAGGGACAAGTCTACTTAAGCGATACAGTGATGATGGATGGTGATAAAGCGGTTACTTTATCGGAAATATTGGAAACAATAACTGGAATAAAGGTGGTGATGGAAGGGGACTTACCCGAGGGAGTCTGTCCTGAGTGCTCCAGATCAGCTACAAATGCTGCTGAGTTCAAATTATTATGTCAAGCAGCAGCTCAGCAATGGGATACCACTATAGCTCTTCTCCATGACCTGCCTACCCAATGCACAGACAATAAAACCGTTTTTGCTATAATTGACAAAAATAAAATGATTGCCATTAATGATATGAAAAAATCGTACAACCATACCACTGCAGCTCTTCGATTAACTAAATACTTATCCAAGTGTCCAGAACCTAAAAGGGACAGTATATATAAATGTCCAAATTGTGATAAAAGTTTCTCGAGTCCAATTAAATTTAGTTTACATTTGAAAGAATCTCCAGATTTGCAACGAGCATGTTACGTATGCGGCACTATCGTATCTCATAATAGTTTGCTAAACCATTTAATTAAGAAACATAAGGAAAAACCATTTAGTTGTAAGAAATGTACAGCAGTATTCCGTTCTTATAATCAATATGTGCATCATGTGGAGACAACTCATAAGTATGGTCGGGCCTTCTGTGGTGATTGCGGACGTAGTTTTCAGTCGCTTAATGCTTATCATGCTCATGTCTCGATACATGTATCTAAAAACTGTCCAAGCTGTGATAAACTATTCCGTAACCATTCTTGCTATATGCATCATACAAAGAACTGTTGTGAATTATACAGTAAGAAAAAAGTTATGAAAAAAAAAAAGAATGTTACTATAGAAATTAATAATGCAAAAAACAATCGTAAAATCAATGTAGGGCTTCGAGGAGCTACGTGCAAAGAGTGTATTTGTGATTATTGTGGCAAAACGTTTGCCAGAAAGAAATTCATTTGTGCACATATACAGATAGTCCATATGAGGAATACCCACCGTCCCTGCATTTATTGTGGAAAGCTGTTAGCATCAGCTCATATGTCAGAACATATGAAACAGCATAAGCCTGATTGTACCTTCACTTGTGAACAATGTGGCATAATATTAAAAACTAAGTTGGGATACAATCAACATATACGTTTACATACTGGAGAGAGACCCTACGAATGTAAGCAATGTGGGGAAACATTCTCAGCATCTTCAAGACGGTCAGAACATATACGGAAAGTTCACAAAACAAAAGATATAATTCTAAAGCAACAGTGTCACCTCTGTCCAGCCAAGTTCAGGTTGCCATATCGACTGAAAAGACACCTGAGGTCAGTCCACAATGATGACCAGGATCAAACTCCTCAGTTTGAATGTACTGTGGTGGACGAAACCGACTTTCCCGCGGCGTTGTGCTGCGCGTGCGCTAATAACGCCATATCGGCGTGGCAGTTCAGACACCTATGCCATGAGTCGCACAACCATTGGACTAAAATTACCGAGGCCCTGATGATACCAGAAAATCCAACTAAACAAGATAAGACCTTTTATATAACGTGTAATGGAACTGTCTTTAATGATTATGTGCCTGTTAGTCAGTCTCGAGAAGATGCTATCAAAAGACTGAATTTTTTGTCTGGTGCTAAACATAAAATTCGTGCGAAATATAAAAAGAAATGTTCCAAAAAGAGTGAAAACAAGTACAAGTGCAAGGATTGCGGTAAACAATTTGAAGTACCCTATTTCTTGAATCGACATTTGCTAAATTCTTCGGTACGCGCATGCACATTGTGCGGGAAGGTTGTGTTGAAAGAAAAATTACCAGTACATTTGGAGAGGTCTCACCAGCTTATGGTCGAATTTTGTGATATTTGCTATAAGTTATTTGATGATAGACTTCTTTTGGATCGCCATAAACAGATATTGCATGCAGATAGCAGCTTACAGTGCAATACCTGTAGGAACGGCTTCAAAAATGATCGATCCCTTAGAGCTCATATGTACACACATACGCTTTTTAACTGTTCATTGTGCAACAGCAGTTTTGAAAACAGAAAATGTTACTTACACCATAGGAACAATTGTCAAGGATCCAAATGTACGAATCAATATATTTACGAATGTAACGACTGCGGGAGCAAATATACTAAAAAACCGTCTTTAAGAGTACACATAGTCCAGAAACATTTAAATGTTCTACCATACATTTGCCAAATTTGTGGGAAACGTAGTTCTTCGAAGACCCACCACAAATCTCACGAATTAGTTCACAAGACTGAAAGAAAAATATATCAGTGCTTCTGCGGCGCCAAGATGAGAACAGTTCACGGCTTTCAAATGCATCAGAGGATCCATTCTGGGGAGAAACCATATGAATGTCAAGAATGTGGGGACAGGTTTCTATCGGCTTCCAGAAGGTTGGATCATATAAAGAGGAAGCATAGACGGAAAAATCTTGGCTGTGATGAGTGTGACGCAAGATTTGTTAGACCTTCGGAGTTGAAGAAGCACTGGAGGACTGCCCATCATGTGCAAGAGGATCAATTGTTTCCACGAGGCCTGTGCGTGTCCTGCACTAGGGTAGCCGTGTCTGCTTCGGAATTCCGAATTTTTGTAACGAAATCACAGCGATTGTGGTCCAATTGTATAGACTCCCTTCACACTCTTCCAACTCTGAATACTTCCCAAAAATCCCTATATGCAATCGTTAGAGAAAACCTGTTGCTACAAACTGTCAATCATTTTGAAGGGAATGCAAAAGATTTGTTAGAACATTTAACTAACAGGATTGTGAAACGAAAGAATTTATTAGTGGAACGGAAACCTAGGCATCCTAGGACAGGACCAGCGTGCAGTTGCACAGATTGTGGCAAGAGCTTCCTTAGTCCATATTACCTAAATATGCATTTACGGAACAGTGGACAGAAGGAAGCTTGTTGGCTCTGTGGCGCCATGTTAACACGAGGGCAAGAAATGAAAGAGCATCTACGGAAAATACACAAAACCGAAATGTTTATTTGCTCAGAATGTCCATTGCTTTTTAAAACTGACGTGGACAGAAAGCGTCATGCCAAAAAAAATCATGGGCCCGGTGTCATGACGTGCGCAGATTGTGGCAGAACATTCCAGAGGAGTGCGTCTTTCGATGTGCACACACAAATGCACACAGTTCGTACATGTAGATCCTGTGGAGCACAGTTTACGAATCGTGGCTGTTACAGAGCGCACAGGTCCAAGTGTGAACCTGACGCTAAACCAGATTTGAAGACGATACCAAGAAACAGACGTTCTAATATCCGTGACCCGGCAACTTTCACTTGTGATTATTGTGGCAAGACCTACCATTCGCGTCCGCAATTAAAAAATCATATACTATGGATTCACATGGATATACGACCTCATCAGTGTCAGTGGTGTGGAAAAAGGTTTTATACGCCAGCCCGTTTGGCCGAACACTCAGTAGTTCATACGAGAGTGAGGAATTTTGAATGTGATATCTGTGGTGCCAAGTTAGTGTCCAAAATGGCGGCGGTGTACCACAGGAGACGGCACACAGGTGAAAGACCATACGAATGCCCAGATTGTGGAGAAAAGTTTATATCTTCATCTCGTAGAACGGAGCATGCCAAGCGAAGACATAATAAAGGTTCCCGTATCCATTGCTCGGAATGTCTGGCGAGTTTTGTGAGGAATCATGAATTAAAGAAACATATGGACAAAGTTCATAATAATGAAAATCATGTTGTTGTCAAAATAAAAAAGGAAAATAAAGAGTATCATATGAAGGCTGTATGA
Protein Sequence: MTRQVDVKALVSHIVRGDGANKCRICLGDTTEGQVYLSDTVMMDGDKAVTLSEILETITGIKVVMEGDLPEGVCPECSRSATNAAEFKLLCQAAAQQWDTTIALLHDLPTQCTDNKTVFAIIDKNKMIAINDMKKSYNHTTAALRLTKYLSKCPEPKRDSIYKCPNCDKSFSSPIKFSLHLKESPDLQRACYVCGTIVSHNSLLNHLIKKHKEKPFSCKKCTAVFRSYNQYVHHVETTHKYGRAFCGDCGRSFQSLNAYHAHVSIHVSKNCPSCDKLFRNHSCYMHHTKNCCELYSKKKVMKKKKNVTIEINNAKNNRKINVGLRGATCKECICDYCGKTFARKKFICAHIQIVHMRNTHRPCIYCGKLLASAHMSEHMKQHKPDCTFTCEQCGIILKTKLGYNQHIRLHTGERPYECKQCGETFSASSRRSEHIRKVHKTKDIILKQQCHLCPAKFRLPYRLKRHLRSVHNDDQDQTPQFECTVVDETDFPAALCCACANNAISAWQFRHLCHESHNHWTKITEALMIPENPTKQDKTFYITCNGTVFNDYVPVSQSREDAIKRLNFLSGAKHKIRAKYKKKCSKKSENKYKCKDCGKQFEVPYFLNRHLLNSSVRACTLCGKVVLKEKLPVHLERSHQLMVEFCDICYKLFDDRLLLDRHKQILHADSSLQCNTCRNGFKNDRSLRAHMYTHTLFNCSLCNSSFENRKCYLHHRNNCQGSKCTNQYIYECNDCGSKYTKKPSLRVHIVQKHLNVLPYICQICGKRSSSKTHHKSHELVHKTERKIYQCFCGAKMRTVHGFQMHQRIHSGEKPYECQECGDRFLSASRRLDHIKRKHRRKNLGCDECDARFVRPSELKKHWRTAHHVQEDQLFPRGLCVSCTRVAVSASEFRIFVTKSQRLWSNCIDSLHTLPTLNTSQKSLYAIVRENLLLQTVNHFEGNAKDLLEHLTNRIVKRKNLLVERKPRHPRTGPACSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMLTRGQEMKEHLRKIHKTEMFICSECPLLFKTDVDRKRHAKKNHGPGVMTCADCGRTFQRSASFDVHTQMHTVRTCRSCGAQFTNRGCYRAHRSKCEPDAKPDLKTIPRNRRSNIRDPATFTCDYCGKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECPDCGEKFISSSRRTEHAKRRHNKGSRIHCSECLASFVRNHELKKHMDKVHNNENHVVVKIKKENKEYHMKAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00781193;
90% Identity: iTF_00781193;
80% Identity: -