Hhim002270.1
Basic Information
- Insect
- Heliconius himera
- Gene Symbol
- -
- Assembly
- GCA_013421065.1
- Location
- JAATLT010016737.1:81-2835[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 6.1e-07 29.2 0.1 5 41 23 59 19 63 0.82
Sequence Information
- Coding Sequence
- ATGGAACTAATCAAAGAATCAGCATCTAAACCAAAGCAGAAACGAGCAAATTGGTCCGAGAACCAGATCACTTGTGCTATGATGGCTGTAGAGCGGAAAATTCTTTCCCAAAGAGAAGCTGCTAGAAGATATAACATTCCACGAAGAACATTAAGGAATCATTTAAAGACAGGCTCAATGAAAAGGAAATTAGGTCGATCGGccaccttgacaccagaacaagAAGAAGATTTAGTGGGTAGAATAATACGCTTGGCTGAAGTGGGAATGCCCCTAACACCTAAACATGTTCGAAAGCAAGCATACGTTTTTTGCACCAAAAACAACATACCTAATCGCTTTAGTGATGCCTGTTCTACAGCTGGAAGAAAATggcttaatttatttctaaaacggCATCCTCAACTTGTTCGGCGAAAATCCCAAATGATGAACCCAGCAAGAGCCCAAAaactaaatacatttattgtcCGTGATCATTTTAATAAAGTGAAGAATCTACGAGAGaaacttaatattcaaaatagacCGGAATGCCTATATAATATGGACGAAAAGGGCTGCCGTATATCACTTCATCACCAGCAAATCGTGTTAGCCCAAAAAGGGACAAAAAGATTGCATCAAATATCTAACGAACATGCAGAAAGTGTCACAATAGTCGGCTGTGTTAATGCTATAGGGAATGCTATTCCACCGATGATTTTGTTTAAAGGCAAAAGAATGAAACCTGAATTTACCGATAATTTACCAGCAGGATCATTGGTTAAAATGACTGCAAAAGGATACATGACACATGaaacttttattgattttattaaacatttggCTAAACATAAAACTTCAGGAAAGTGTCTTCTGGTGTTCGACGGAGCGGCGTGCCATCTTGATTACAGCATTGTAGAAGAAGCTGAAAAACATGATATAACACTATATTGCCTTCCGTCAAATACGACACACGAACTCCAACCCCTGGATAAATCCGTATATCGTTCGTTTGAGCACCATTGGGACCAAGAACTGCTAAAATTTGTTAGTAAAAATCCAGAGAGAAAACTAAACAAATCAAGTTTTAACATGATCTTGTCGGAAGTCTGGCCAAAATGCATGACacatattaatatcataaatgGATTCAAAGCTACCGGTCTTTATCCGTTTGACCCCGAAGTTATACCCGAAGAGGCGTTTGCTCCATCTGTATTAACAGAGCTATATACTTCAGCAAGCAGTGAGAATGTTAAAGCGTCCACCAGTCACACACACGATATTGCACAGAACACAAATGTTAGACTGATTACTGGTATAAATGTTAACACAGGATCCGAGTCTGACTCAGATTCCGATAGTATCCCATTATCTGTATTAAGAACTGGTGCTGCTACTCCTACCCCAAGCCAACTAAGTAAGGGAGCTTTTGAATTCAATAATGAAAACCACAACCCAATGCTGCATTTTCATGCAGGAACTCCTGCTGTCGACTCCTCAATAAATCAAGCCAGCAATATAAGAGCGAACAAGTCACCTTTTCAAATACTCATTCCGACACCAAAAATCCTTAATATTAACCCAGCTGCCCCACGAAAGAAAGCATTAAATTATAAGGGGCAACAAGtaacaaaagatttatttgCAACAAAAAATGAAAGCACGCCTTCTACGCAGCCTAAAGGAAGGCCAAAGACCATCAAAAATAGAGGTCAGAAATCTGGAGTTACTAGAAAGAAGGAGCAGTTATTAACTGAAACTTGGTATTGTCATGCTTGCAAAGAAGATAAAATGTTGCACATGAGGCAATGTAGATTATGTGGTGCCTGGTACCACGAGATATGTGTTGGCCTTGATTCAGATGATGAGTTTTTCGAATGCCCTGTAGCATgcattaagaaaaattaa
- Protein Sequence
- MELIKESASKPKQKRANWSENQITCAMMAVERKILSQREAARRYNIPRRTLRNHLKTGSMKRKLGRSATLTPEQEEDLVGRIIRLAEVGMPLTPKHVRKQAYVFCTKNNIPNRFSDACSTAGRKWLNLFLKRHPQLVRRKSQMMNPARAQKLNTFIVRDHFNKVKNLREKLNIQNRPECLYNMDEKGCRISLHHQQIVLAQKGTKRLHQISNEHAESVTIVGCVNAIGNAIPPMILFKGKRMKPEFTDNLPAGSLVKMTAKGYMTHETFIDFIKHLAKHKTSGKCLLVFDGAACHLDYSIVEEAEKHDITLYCLPSNTTHELQPLDKSVYRSFEHHWDQELLKFVSKNPERKLNKSSFNMILSEVWPKCMTHINIINGFKATGLYPFDPEVIPEEAFAPSVLTELYTSASSENVKASTSHTHDIAQNTNVRLITGINVNTGSESDSDSDSIPLSVLRTGAATPTPSQLSKGAFEFNNENHNPMLHFHAGTPAVDSSINQASNIRANKSPFQILIPTPKILNINPAAPRKKALNYKGQQVTKDLFATKNESTPSTQPKGRPKTIKNRGQKSGVTRKKEQLLTETWYCHACKEDKMLHMRQCRLCGAWYHEICVGLDSDDEFFECPVACIKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01506273;
- 90% Identity
- iTF_00777947;
- 80% Identity
- -