Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01005244.1:6234-9111[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.9 7.3e+02 1.6 1.6 3 22 446 465 444 468 0.90

2 9 1.2 99 4.3 1.8 2 19 490 507 489 513 0.91

3 9 0.00047 0.039 15.1 3.1 1 23 527 550 527 550 0.97

4 9 0.0015 0.12 13.5 0.9 1 23 555 579 555 579 0.92

5 9 9.3 7.6e+02 1.5 0.8 2 23 600 624 599 624 0.82

6 9 0.00026 0.021 15.9 0.1 2 21 630 649 629 650 0.96

7 9 0.00052 0.043 14.9 0.7 1 23 707 728 707 728 0.98

8 9 0.00025 0.02 15.9 1.7 1 23 734 757 734 757 0.92

9 9 0.68 56 5.1 1.3 2 12 781 791 780 792 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.9	7.3e+02	1.6	1.6	3	22	446	465	444	468	0.90
2	9	1.2	99	4.3	1.8	2	19	490	507	489	513	0.91
3	9	0.00047	0.039	15.1	3.1	1	23	527	550	527	550	0.97
4	9	0.0015	0.12	13.5	0.9	1	23	555	579	555	579	0.92
5	9	9.3	7.6e+02	1.5	0.8	2	23	600	624	599	624	0.82
6	9	0.00026	0.021	15.9	0.1	2	21	630	649	629	650	0.96
7	9	0.00052	0.043	14.9	0.7	1	23	707	728	707	728	0.98
8	9	0.00025	0.02	15.9	1.7	1	23	734	757	734	757	0.92
9	9	0.68	56	5.1	1.3	2	12	781	791	780	792	0.86

Sequence Information

Coding Sequence: ATGCTGTCGCCGCACGACGACGACGATGACAGCCATCTTTGCATCAAGTGCAATGCCACTATCATTGGTCTCGATAACTATATTAAACATAGAAAGCAGGCCTGtggcaaaagaaaaaatgaagtCAAGGCTGATCTTCCGCCCATCGATCCATTGGAACCAACGTATAGTCTTGGCGCAGATGTATTTTTTCAATCGTTAGAATTGCAAAGTAGTGTCAAAAAATCTTCCCTTTCACGTCTGACACCACCTACTCCAATATCTAAAACGAATTTAggcaatatagaaaaaaagagCGTTTTGACTGTTCCTTCAACATCACATCTTCCGCGTATGAGTCCTATAGAAACTAATTTAAGAGGAGAAGATTGGATAGGTGGTCATAGTTTAAGGATTGGTAGCAATGAAGACAATcagacaaaattaataaatgctgTCGCAAGTATTAGTGGTTcggtaaaaaaagatattccaAGTACATCTTACAATATAGAGACGTTCAATGATTTTAAGGGAGATGATGATTCGGAAGAATCAGATGATTCAGATGATGATGAAGAAGAAGATGAAGTGCCACATGGAGGAAAATGGAAACCACCACCGACTCATACAGGAGGTAAGTGGCGACCCGCATCTCCAGAACGCGATGAGTGGGAAGATCAGGACCAACTTGACCGTGACTATGATTATGACGCCCCACCCCCTGGACATACTAAGGGTAAATGGGTTCCAGGAGCTAATGAGAAAACACAAATAATGCAAACGACAATTCAATCAAAGGGATCCGTGCAGTATTGGTGTGGGCCGTGTAATCGCCGCCTAGGGTCAAGAGCTATTTATGATAAACATCTCATGTCTAACTTACATATGCGAAAGGTTTTACCGGAACATGAATTAGAATTTTCAGGGCACTTAGAGCCAATAAGAAACATAACTGAGAAAAGAGCGACACGGcccaatttatttgtaaacgaATCAATTTCACAAACACCACGAAAGAGACAAAAATTGGaatctaaaacaaatataaaagttaagaaaaagaaaaggaaaagaaggtcatattttatacaatgttCTGGTTGTAAGTCACGTGTGCGAATGCACTTAATCGGAAAGCATCTCATATCTCACTATCATTTTCGAAAAGCAGCTGATATCAAAAGTGAGGTTTATCAACAGTTTATTCTTGATAACATGGATGCCATAGTTCATCAAGCACCTTTTCAATGCAGTCCAtgcaaattttatactaattgGTTACCAAACTTCTTGCAACATTGGTTTTCTGAAGAGCATGAGCGTGTTACATCTGCAATGGATGGAAGGTACTGGTGTTCCTTTTGTAAATCTGAATGTGAGACTTCACAAGACATGCTTAATCATATGTCCAGCTCCGAGCACAGTGAAGTAGTGGCTGTAATAAATAGATCTATGCCGATCATAATACGAAAGAAAACAGTCCTACGATGTGAAACGTGTCAACAGGAATTTCGATATAATATGGAGATTAAGCAACATTGCCTAAAAACAGGTCATGATTTCGCATACACGGCCACTGATAATTATCAAGAGCTACACAGATGTCAATATTGTAAAGTTAAATTCAAATCATCAGTTACTTTGGCAGCTCATTTGAAATCTAAGCACAAACAAAAGGCGTTTTTCTGTCTTGTATGCTCTAAAACTTTTGCATCTTCCGAAGAAGCTAAACGTCATCGACAAACTTCGGAGCATAGGATCAGAAGAAAGGAGATACTTCATGAAAGAGGAAACATTTCAAAAGATTTAAGTAAGAAATGTCCATATTGTACAGATAAAGTTGTGTTGAAGAATATTCTCGAACTCAAAGATCATATACAAAGATTACACCCGGacataagaaaaaaatGTCCAAAATGCGGCAAAGCCTTTATATTCCCACAAGAAGTTTCCCGTCACATTCGAGACAACGCATGCCAGTTCCATAAGAACGAACCAATCCACTCATCAATCTTGTGGAACTGCAGTCAATGTTTATTCACCACAGACTCCCAGGCGGAGTGTTTTTTCCACGAGGTTCTCCACACAGAATCTGTAGTAGATCAAAAAAGTGGGAAAGCCAAATCTATACAGAAGTATTCATGTCCTATATGCGCCAAGAACTTCAAGAAAGCTTCCTTACGACTTCATTTACGGCAACATACTTTCGAAAGACCTTTCGTTTGTTCTACATGCGGTGCCAATTTCACGAGGCAGTCCAGCTTAGCTAACCATTGTAAGATGGAGCACGGGAACTTGGATAGGCCGAAGTTGTCTTCGATTGATGCTGCTCTTATTAAAATGGCGGAGGAGACGCTTAAGTGTACCAAATGTAAGAAGACGTTTGGTGACAGGTGA
Protein Sequence: MLSPHDDDDDSHLCIKCNATIIGLDNYIKHRKQACGKRKNEVKADLPPIDPLEPTYSLGADVFFQSLELQSSVKKSSLSRLTPPTPISKTNLGNIEKKSVLTVPSTSHLPRMSPIETNLRGEDWIGGHSLRIGSNEDNQTKLINAVASISGSVKKDIPSTSYNIETFNDFKGDDDSEESDDSDDDEEEDEVPHGGKWKPPPTHTGGKWRPASPERDEWEDQDQLDRDYDYDAPPPGHTKGKWVPGANEKTQIMQTTIQSKGSVQYWCGPCNRRLGSRAIYDKHLMSNLHMRKVLPEHELEFSGHLEPIRNITEKRATRPNLFVNESISQTPRKRQKLESKTNIKVKKKKRKRRSYFIQCSGCKSRVRMHLIGKHLISHYHFRKAADIKSEVYQQFILDNMDAIVHQAPFQCSPCKFYTNWLPNFLQHWFSEEHERVTSAMDGRYWCSFCKSECETSQDMLNHMSSSEHSEVVAVINRSMPIIIRKKTVLRCETCQQEFRYNMEIKQHCLKTGHDFAYTATDNYQELHRCQYCKVKFKSSVTLAAHLKSKHKQKAFFCLVCSKTFASSEEAKRHRQTSEHRIRRKEILHERGNISKDLSKKCPYCTDKVVLKNILELKDHIQRLHPDIRKKCPKCGKAFIFPQEVSRHIRDNACQFHKNEPIHSSILWNCSQCLFTTDSQAECFFHEVLHTESVVDQKSGKAKSIQKYSCPICAKNFKKASLRLHLRQHTFERPFVCSTCGANFTRQSSLANHCKMEHGNLDRPKLSSIDAALIKMAEETLKCTKCKKTFGDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214005;
90% Identity: iTF_00783014;
80% Identity: -