Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01000594.1:8995-13784[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.077 6.3 8.1 0.8 1 21 79 99 79 100 0.95

2 22 7.3 6e+02 1.9 0.1 2 23 128 149 128 149 0.90

3 22 0.012 0.99 10.6 0.3 2 23 172 193 171 193 0.97

4 22 0.016 1.3 10.2 0.1 1 23 197 219 197 219 0.95

5 22 1.8 1.5e+02 3.8 0.7 1 15 224 238 224 247 0.78

6 22 0.047 3.8 8.8 0.2 1 23 253 276 253 276 0.94

7 22 0.00058 0.048 14.8 0.2 1 21 399 419 399 422 0.90

8 22 5.3 4.3e+02 2.3 2.0 1 13 429 441 429 443 0.89

9 22 2.9 2.4e+02 3.1 0.4 1 19 489 507 489 511 0.86

10 22 0.031 2.5 9.3 1.5 2 23 536 558 535 558 0.91

11 22 0.0065 0.54 11.5 1.6 1 23 580 602 580 602 0.98

12 22 7.6e-05 0.0062 17.6 1.1 1 23 606 628 606 628 0.98

13 22 0.0015 0.12 13.5 1.5 1 23 671 693 671 693 0.97

14 22 1.6 1.3e+02 4.0 0.2 2 23 717 739 716 739 0.89

15 22 0.87 72 4.8 3.0 3 23 763 783 762 783 0.97

16 22 3.2e-05 0.0026 18.7 1.4 3 23 789 809 788 809 0.97

17 22 0.047 3.9 8.8 2.8 1 23 816 839 816 839 0.98

18 22 0.00029 0.024 15.7 2.8 1 23 845 868 845 868 0.97

19 22 0.0017 0.14 13.3 0.7 1 23 874 897 874 897 0.97

20 22 0.00052 0.043 14.9 0.5 1 23 903 925 903 925 0.97

21 22 5.2e-07 4.3e-05 24.4 1.0 1 23 931 953 931 953 0.99

22 22 6.9e-05 0.0057 17.7 4.8 1 23 959 981 959 982 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.077	6.3	8.1	0.8	1	21	79	99	79	100	0.95
2	22	7.3	6e+02	1.9	0.1	2	23	128	149	128	149	0.90
3	22	0.012	0.99	10.6	0.3	2	23	172	193	171	193	0.97
4	22	0.016	1.3	10.2	0.1	1	23	197	219	197	219	0.95
5	22	1.8	1.5e+02	3.8	0.7	1	15	224	238	224	247	0.78
6	22	0.047	3.8	8.8	0.2	1	23	253	276	253	276	0.94
7	22	0.00058	0.048	14.8	0.2	1	21	399	419	399	422	0.90
8	22	5.3	4.3e+02	2.3	2.0	1	13	429	441	429	443	0.89
9	22	2.9	2.4e+02	3.1	0.4	1	19	489	507	489	511	0.86
10	22	0.031	2.5	9.3	1.5	2	23	536	558	535	558	0.91
11	22	0.0065	0.54	11.5	1.6	1	23	580	602	580	602	0.98
12	22	7.6e-05	0.0062	17.6	1.1	1	23	606	628	606	628	0.98
13	22	0.0015	0.12	13.5	1.5	1	23	671	693	671	693	0.97
14	22	1.6	1.3e+02	4.0	0.2	2	23	717	739	716	739	0.89
15	22	0.87	72	4.8	3.0	3	23	763	783	762	783	0.97
16	22	3.2e-05	0.0026	18.7	1.4	3	23	789	809	788	809	0.97
17	22	0.047	3.9	8.8	2.8	1	23	816	839	816	839	0.98
18	22	0.00029	0.024	15.7	2.8	1	23	845	868	845	868	0.97
19	22	0.0017	0.14	13.3	0.7	1	23	874	897	874	897	0.97
20	22	0.00052	0.043	14.9	0.5	1	23	903	925	903	925	0.97
21	22	5.2e-07	4.3e-05	24.4	1.0	1	23	931	953	931	953	0.99
22	22	6.9e-05	0.0057	17.7	4.8	1	23	959	981	959	982	0.96

Sequence Information

Coding Sequence: ATGGACAGTGGAAGAACTGACTCaggttttctatttttaggaGAACGCGGTCAAACAGACAACAGAAAGGATAAAACATCTTCTGAAACTTTACTATCTTGTGATACGAAAGTTATTGAAAAACGACGTTATCAGCGAAGTGCGAGAGCTGAAGCaagatttataacaaaaaagaacGCCACAGCCTTGCTCGAGTGTTGGTCGTTATGTCCATTTAGGTGGAAaagaaatagatttaaatgtGCTTATTGTGAAGATAACTTCACCGAATGCTCAGAGCTAAGAGACCATGTTAAAATATGCTCGATACAACACAGCGTCAAAGATATCTACAGTAAATTCAAAGAAATGTCACTGATAAACGTTGATATTACTGAGGCCACCTGTAGAATTTGTGCCATGTCATTTCAAAGTATTCTTGAAATGCGAAATCATGTTATTGATCACGGGTATGATGTAGATACTACATATCCTGATGGCGTTCTGCCGTTTTGTTTGAACAAGGAATCTTGGAGATGTGTAATATGTTATGAATCTTTTAACAACTTTCTCAAATTGTACGAACACATGAACATACATTATCAACATTACATATGCGCCACTTGCGGTAAAGGATACATGACGGCGCCGAGATTGCGCAAACATTCTGAAGTACATATAACTGGGACTTTTCCATGTGATAAGTGTCGACGAATTTTCACCATGCGTGCAGCTAGAGATTATCATAAAGCTCATGCTCATGCTAAGGGGCCTCGTTACGAATGTCCACAATGTAATATGAGGTTTGGAGGCTACTATGAAAGAATGAATCATTTGAATGAGGCTCATAGAGAAAAGGAAGTTTCTTACAAGTGTGCTCATTgtTCCGCTATTGCGGATTATGAAGAGTTAGTAGTAGGAGTTAAACGCAATAGAAAGTTAAAGGAGAACGTCTGTGCGAGGCAAATGCGTCGTCGACGGCGCGCCAACAACGAGCTACCAGAAGAATCTGAGAAAAGAATATCTAAAACAATGATGCGTAGAAATGCCATGACGCTTCTCGAATATTCAACTGCCTGGGCCTTCCGTTGGTTTAGAACTCACGTCCAATCACATGAGATTGGTAATTTTCCTTGCGGAGAATGTGAAGAAATTTTGGAAACGAGAGCTGCCAGAATGTGCCATAGATTAAGAATACACAAAAAAGGAGTACGGTACACATGTCCATATTGTCCAGAAGTATTTACTACTTATTACGCAAGAGCAAAACATTTAGTGGATGGACATAatcaagaaaagaaaaattatgagTGTTCATCTTgtggaaaattatttgaaactaGTTgcACAGAAGCCACCGGAACAACAAAAAATTCAATAGCGATTGAGTGGAGAAAGAAACGCCCATTTTTAGAGAACAAGGCTAATTCGGCCGTAATACTAGATTGCTCAAATGCTATAGTATTTCGATGGTCGCGTGGTAAATTTCTTTGTGCCTACTGTCCAGAAATATTCCAAAACGTAGCAGAAATACGCAAGCATTGCGATATACATGAAAAGCTTTCAGTACTACAGAAACCAAAAGTACACAATTCATTCCcactaaaaatagatataacagATTTAAAGTGCACGCTGTGTAATAATAGTTTCAAAAAATTTACGGATTTCAAAGTTCATTTAGTTAATGTTCACAGTAAAGTATTTGACTCAAACTACGACGACGGTGTTATTCCGTTCATACTTACGGGCTCGGAGTACAGATGTGTCATTTGTCACAACTTGTTTGAAAGTTACGTGAATTTATTTAGTCATATGAATGAGCATTATCAAAGTTTTGTATGCTACACGTGTGGTAAAGGATACTCGGCTAAATATAAACTGCGAGCACATCAGAAAAGTCACGAGACCGGGACATTcacaaagtttatatggaaacgTGGACGAAGGCTTTACAATGATCACAGAGATAACGCCGCAACTATTATACAATTCTCAAATGTTTGTCCTTTTCGCTGGAAACGCGGAGCTTTCGCTTGTTCTCATTGTCCGAGAACTTTTGGCAACTTTAAAGACGTTAGTAATCATATGCAGGAGCATCCTAATCGCCTTGAGGCAATGCGATATGCTCGTCCTTATGATAATGTAAAGGTGGAAATAAGTAACCTTCAATGTGGaatttgtaatgaaaatatgaatggcTTAGAACATCTTAAAGACCATTTGTTTGAAGGTCACCAAAAATCAATCACCAAAGACCTTAGTCTTGGTGTAAccccttttattttaaaagaaaaagaaatgctTTGTACTCATTGTGATGAACGTTTTCTCTTGTTTTCAAGACTGAACAGTCACATGAACCAACACTATCCAAATAATATCTGTCCTCACTGCGGTAAATCTTTCTCTGCCGCTCATCGCCTTAAGGCCCACCAGCTAATACATGAAACTAATAACCAAGAGCATAAATGTGCCAAATGTGGTGATATATTCGAGACGcgatctttaaaaaattatcacatGAACACTAAACATGCAACAGAAAATCGATACAGATGTCCCTATTGTAGAATATCGTTTAAGCGCTACTCAGATAGAGTTCGTCACCTAAAGCAGTTTCATAATCAAAGCGTAGATTATCCATGTCATTTATGTACAGCAGTTTTTGCTATGTCCGACCAAAGAACCAAACATATAAGAAACGttcatattaaacataaacaatttCAGTGTGATTTCTGCCCAAGTAAGTTTGTCACTGCCGGTCAGTTGAAGAGTCACTTAGTAAAACACAGTGGTGTCAAGGAATATCAATGCAACGTGTGCAAGAAGAGTTACGCGAGAGCTAGAACTTTGAAAGAACATATGAGAATACACAATAATGATAGAAGATTCGTTTGCGAATACTGTAATAATGCgtttattcaaaaatgtaGTCTTAAAAGTCATATTCGAACACATCACCCGAATGCGGAACCAGTGAAAATTTCagtatag
Protein Sequence: MDSGRTDSGFLFLGERGQTDNRKDKTSSETLLSCDTKVIEKRRYQRSARAEARFITKKNATALLECWSLCPFRWKRNRFKCAYCEDNFTECSELRDHVKICSIQHSVKDIYSKFKEMSLINVDITEATCRICAMSFQSILEMRNHVIDHGYDVDTTYPDGVLPFCLNKESWRCVICYESFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCRRIFTMRAARDYHKAHAHAKGPRYECPQCNMRFGGYYERMNHLNEAHREKEVSYKCAHCSAIADYEELVVGVKRNRKLKENVCARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLEYSTAWAFRWFRTHVQSHEIGNFPCGECEEILETRAARMCHRLRIHKKGVRYTCPYCPEVFTTYYARAKHLVDGHNQEKKNYECSSCGKLFETSCTEATGTTKNSIAIEWRKKRPFLENKANSAVILDCSNAIVFRWSRGKFLCAYCPEIFQNVAEIRKHCDIHEKLSVLQKPKVHNSFPLKIDITDLKCTLCNNSFKKFTDFKVHLVNVHSKVFDSNYDDGVIPFILTGSEYRCVICHNLFESYVNLFSHMNEHYQSFVCYTCGKGYSAKYKLRAHQKSHETGTFTKFIWKRGRRLYNDHRDNAATIIQFSNVCPFRWKRGAFACSHCPRTFGNFKDVSNHMQEHPNRLEAMRYARPYDNVKVEISNLQCGICNENMNGLEHLKDHLFEGHQKSITKDLSLGVTPFILKEKEMLCTHCDERFLLFSRLNSHMNQHYPNNICPHCGKSFSAAHRLKAHQLIHETNNQEHKCAKCGDIFETRSLKNYHMNTKHATENRYRCPYCRISFKRYSDRVRHLKQFHNQSVDYPCHLCTAVFAMSDQRTKHIRNVHIKHKQFQCDFCPSKFVTAGQLKSHLVKHSGVKEYQCNVCKKSYARARTLKEHMRIHNNDRRFVCEYCNNAFIQKCSLKSHIRTHHPNAEPVKISV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00776189;
90% Identity: iTF_00776189;
80% Identity: -