Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01000736.1:6537-11567[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00022 0.018 16.1 1.7 1 23 79 102 79 102 0.93

2 15 0.00093 0.076 14.1 1.2 2 23 197 219 196 219 0.95

3 15 2e-06 0.00017 22.5 0.8 1 23 224 247 224 247 0.97

4 15 0.27 22 6.4 0.8 1 23 252 275 252 275 0.95

5 15 0.0015 0.12 13.5 2.4 2 21 278 297 278 300 0.95

6 15 0.01 0.84 10.9 1.6 3 21 305 323 303 324 0.93

7 15 0.0034 0.28 12.4 0.5 1 22 375 396 375 398 0.90

8 15 0.24 19 6.6 0.1 2 23 426 448 425 448 0.95

9 15 0.0002 0.016 16.3 0.1 2 23 471 493 470 493 0.96

10 15 3.4e-05 0.0028 18.7 0.2 3 23 500 521 499 521 0.94

11 15 0.031 2.6 9.3 3.0 2 23 526 548 525 548 0.93

12 15 0.0053 0.43 11.8 5.0 1 23 553 576 553 576 0.97

13 15 3.5e-06 0.00029 21.8 5.0 1 23 580 603 580 603 0.97

14 15 0.00023 0.019 16.1 0.3 2 23 610 631 609 631 0.96

15 15 2.2e-05 0.0018 19.3 0.3 1 23 637 659 637 659 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00022	0.018	16.1	1.7	1	23	79	102	79	102	0.93
2	15	0.00093	0.076	14.1	1.2	2	23	197	219	196	219	0.95
3	15	2e-06	0.00017	22.5	0.8	1	23	224	247	224	247	0.97
4	15	0.27	22	6.4	0.8	1	23	252	275	252	275	0.95
5	15	0.0015	0.12	13.5	2.4	2	21	278	297	278	300	0.95
6	15	0.01	0.84	10.9	1.6	3	21	305	323	303	324	0.93
7	15	0.0034	0.28	12.4	0.5	1	22	375	396	375	398	0.90
8	15	0.24	19	6.6	0.1	2	23	426	448	425	448	0.95
9	15	0.0002	0.016	16.3	0.1	2	23	471	493	470	493	0.96
10	15	3.4e-05	0.0028	18.7	0.2	3	23	500	521	499	521	0.94
11	15	0.031	2.6	9.3	3.0	2	23	526	548	525	548	0.93
12	15	0.0053	0.43	11.8	5.0	1	23	553	576	553	576	0.97
13	15	3.5e-06	0.00029	21.8	5.0	1	23	580	603	580	603	0.97
14	15	0.00023	0.019	16.1	0.3	2	23	610	631	609	631	0.96
15	15	2.2e-05	0.0018	19.3	0.3	1	23	637	659	637	659	0.97

Sequence Information

Coding Sequence: ATGAAGTTAGAGCACGCGAATGAACCGCTCAAATGTGGTTTCTGTCTTAAATCTATGAACACGAAGTTAGGATTTTTAAGGCACGCCGCTAAATGTACAGAACTCGGAATGAATGGAGACGATACGTATATAATAGACGACGACAAGAAACCAGCTGTGAttcaaattagaaataatattgccTGCATACTTAACATGTCTACAGCTataccttttaaatattttatgaatagatTTAGATGTTTCTACTGCCCTAAAGATTTCACGGATTGTGAAGAGCTTAAAGAACACACAGTAATAGAACATCCCGTTTGTGATATTGATTTTAAGTGTATGAGATTACGAAACAGACAGGAAGGaaaacatacaaaatctcATGGTCTTTGTAGTACAAGTGATTATGCCTTGAAACTTATTAAAGGAAGTCATATAGAAGTTAAGATAGACGTTTCAGAGATAGCATGTGACATTTGTTACGAGCCGTTAACTTGTTTTGATGAGGTTGTAGATCATTTGACAAATAAACACGAGTTGGAATACGataaaagtatagatatacCTATACAAGAGTATCAGCTTTCAGATTGTCGATGTCGGATATGTGGTCaagaatttacttattttggtTACTTAATACAACATACTAATATAGCTCATGCTCAAAATACCTTTATTTGTGATAATTGTGGTGAAAAATTCAGTAAAAAACGAGATCTGGCCATACATATGAGACGCTATCACCAAGAAGGTGGATATCCTTGCGATGAGTgttcagatttttttgattcctacatacttttaagtaaacataagaataattttcactttagaAGATGCAAAATATGTGATTTACGCTTCCCATCCTACACTCTTTTAAGAAGACATATAAAATGTGATCATTCTGATGATAACTGTCCGTATTGttcaaaaaaatgtcaaacatCTCAAGGCCTTAAACAGCATATTACAAAGTGCAGTAAAAGATgtgatataaaagtaaaacaagcCTTCGATGAAGAAACTATACAACCTAACAAGAAAAAGAATGTTAaccaaataagaaaaaatatactgtgtGTACTGAACATGTCTACTGCAGTACCATTTAAATTCTTCACAAAATATTCTTGCTTTTACTGTTCTAAAAGTTATGTGGAATTTGATGATCTCAAACAACATGTAGTAGAGGCGCATCCAACTTGTGAtctgaaagaaaaatgtatgaaaaattgtaaaggtGAAAGGATATCGGTTAAAATCGACATATCATCATTATCGTGTAGAGTGTGCTCTGAATCCATAGATAATGTAGATTCTTTAATAGATCATCTTATAACTAAGCATGGAGCTGAATATGATAAAGCAACAACCGGATGTTTTGAatcgtttaaaataatcaaagatAGTATTCCTTGCCCAATATGTTCtactatttttagatattttggaTCTCTTTTAAGACATATCAATTCCGAacatagtaataataacagaatttgtgatttttgcGGCCGTAGCTTCAAAAACGTGGCTAATTTAAAGGTGCATATAACTTATGCGCATACTGGTTCGTGCGAGTGTGACGTTTGCGGCGTAAAGTATAAAAACCAATGGTGCTTAGGTCGACACAAAGCGAAATCTCACAACGCTAAAGATTTCCAATGTACGAAGTGTTCAGAGCGGTTCCAATCACAAtatcataaacaaaaacatctaATTAAAGTCCATGACATAGGCCATAAATGTTCATACTGTGGGAAAATGTTTACGCGAAATTCTTTTATGAAAGACCACATACGTAGGACTCACTTGAAAGAGAAAAATGTGCCCTGTACAGTTTGCAATGAAAagttttttgataattatctATTAAGACTTCACATGGTAAAGCATAAAGGCGAAAGAAAGTTCAGTTGTGAGGTATGTGGTAAAGCGTTTTTGAGGCGCAGTAATTTAAGCGCTCACACAgaaatgcataaaaaatatggccaTGTTTAA
Protein Sequence: MKLEHANEPLKCGFCLKSMNTKLGFLRHAAKCTELGMNGDDTYIIDDDKKPAVIQIRNNIACILNMSTAIPFKYFMNRFRCFYCPKDFTDCEELKEHTVIEHPVCDIDFKCMRLRNRQEGKHTKSHGLCSTSDYALKLIKGSHIEVKIDVSEIACDICYEPLTCFDEVVDHLTNKHELEYDKSIDIPIQEYQLSDCRCRICGQEFTYFGYLIQHTNIAHAQNTFICDNCGEKFSKKRDLAIHMRRYHQEGGYPCDECSDFFDSYILLSKHKNNFHFRRCKICDLRFPSYTLLRRHIKCDHSDDNCPYCSKKCQTSQGLKQHITKCSKRCDIKVKQAFDEETIQPNKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKQHVVEAHPTCDLKEKCMKNCKGERISVKIDISSLSCRVCSESIDNVDSLIDHLITKHGAEYDKATTGCFESFKIIKDSIPCPICSTIFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGVKYKNQWCLGRHKAKSHNAKDFQCTKCSERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFSCEVCGKAFLRRSNLSAHTEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00776181;
90% Identity: iTF_00776181;
80% Identity: iTF_00776181;