Basic Information

Insect: Heliconius congener
Gene Symbol: -
Assembly: GCA_018230605.1
Location: DWAO01001134.1:8908-13605[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00072 0.08 14.4 1.2 2 23 86 108 85 108 0.95

2 14 1.6e-06 0.00018 22.8 0.8 1 23 113 136 113 136 0.97

3 14 0.21 23 6.7 0.8 1 23 141 164 141 164 0.95

4 14 0.0011 0.13 13.8 2.4 2 21 167 186 167 189 0.95

5 14 0.0075 0.84 11.2 1.5 3 21 194 212 192 213 0.93

6 14 0.0026 0.29 12.7 0.5 1 22 264 285 264 287 0.90

7 14 0.18 21 6.9 0.1 2 23 315 337 314 337 0.95

8 14 0.00015 0.017 16.6 0.1 2 23 360 382 359 382 0.96

9 14 2.7e-05 0.003 18.9 0.2 3 23 389 410 388 410 0.94

10 14 0.024 2.7 9.6 3.0 2 23 415 437 414 437 0.93

11 14 0.0041 0.46 12.1 5.0 1 23 442 465 442 465 0.97

12 14 2.7e-06 0.00031 22.0 5.0 1 23 469 492 469 492 0.98

13 14 0.00018 0.02 16.3 0.3 2 23 499 520 498 520 0.96

14 14 1.7e-05 0.0019 19.6 0.3 1 23 526 548 526 548 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00072	0.08	14.4	1.2	2	23	86	108	85	108	0.95
2	14	1.6e-06	0.00018	22.8	0.8	1	23	113	136	113	136	0.97
3	14	0.21	23	6.7	0.8	1	23	141	164	141	164	0.95
4	14	0.0011	0.13	13.8	2.4	2	21	167	186	167	189	0.95
5	14	0.0075	0.84	11.2	1.5	3	21	194	212	192	213	0.93
6	14	0.0026	0.29	12.7	0.5	1	22	264	285	264	287	0.90
7	14	0.18	21	6.9	0.1	2	23	315	337	314	337	0.95
8	14	0.00015	0.017	16.6	0.1	2	23	360	382	359	382	0.96
9	14	2.7e-05	0.003	18.9	0.2	3	23	389	410	388	410	0.94
10	14	0.024	2.7	9.6	3.0	2	23	415	437	414	437	0.93
11	14	0.0041	0.46	12.1	5.0	1	23	442	465	442	465	0.97
12	14	2.7e-06	0.00031	22.0	5.0	1	23	469	492	469	492	0.98
13	14	0.00018	0.02	16.3	0.3	2	23	499	520	498	520	0.96
14	14	1.7e-05	0.0019	19.6	0.3	1	23	526	548	526	548	0.97

Sequence Information

Coding Sequence: ATGAGATTACGAAACAGACAGGAAGGaaaacatacaaaatctcATGGTCTTTGTAGTACAAGTGATTATGCCTTGAAACTTATTAAAGGAAGTCATATAGAAGTTAAGATAGACGTTTCAGAGATAGCATGTGACATTTGTTACGAGCCGTTAACTTGTTTTGATGAGGTTGTAGATCATTTGACAAATAAACACGAGTTGGAATACGataaaagtatagatatacCTATACAAGAGTATCAGCTTTCAGATTGTCGATGTCGGATATGTGGTCaagaatttacttattttggtTACTTAATACAACATACTAATATAGCTCATGCTCAAAATACCTTTATTTGTGATAATTGTGGTGAAAAATTCAGTAAAAAACGAGATCTGGCCATACATATGAGACGCTATCACCAAGAAGGTGGATATCCTTGCGATGAGTgttcagatttttttgattcctacatacttttaagtaaacataagaataattttcactttagaAGATGCAAAATATGTGATTTACGCTTCCCATCCTACACTCTTTTAAGAAGACATATAAAATGTGATCATTCTGATGATAACTGTCCGTATTGttcaaaaaaatgtcaaacatCTCAAGGCCTTAAACAGCATATTACAAAGTGCAGTAAAAGATgtgatataaaagtaaaacaagcCTTCGATGAAGAAACTATACAACCTAACAAGAAAAAGAATGTTAaccaaataagaaaaaatatactgtgtGTACTGAACATGTCTACTGCAGTACCATTTAAATTCTTCACAAAATATTCTTGCTTTTACTGTTCTAAAAGTTATGTGGAATTTGATGATCTCAAACAACATGTAGTAGAGGCGCATCCAACTTGTGAtctgaaagaaaaatgtatgaaaaattgtaaaggtGAAAGGATATCGGTTAAAATCGACATATCATCATTATCGTGTAGAGTGTGCTCTGAATCCATAGATAATGTAGATTCTTTAATAGATCATCTTATAACTAAGCATGGAGCTGAATATGATAAAGCAACAACCGGATGTTTTGAatcgtttaaaataatcaaagatAGTATTCCTTGCCCAATATGTTCtactatttttagatatttcggATCTCTTTTAAGACATATCAATTCCGAacatagtaataataacagaatttgtgatttttgcGGCCGTAGCTTCAAAAACGTGGCTAATTTAAAGGTGCATATAACTTATGCGCATACTGGTTCGTGCGAGTGTGACGTTTGCGGCGTAAAGTATAAAAACCAATGGTGCTTAGGTCGACACAAAGCGAAATCTCATAACGCTAAAGATTTCCAATGTACGAAGTGTTCAGAGCGGTTCCAATCACAAtatcataaacaaaaacatctaATTAAAGTCCATGACATAGGCCATAAATGTTCATACTGTGGGAAAATGTTTACGCGAAATTCTTTTATGAAAGACCACATACGTAGGACTCACTTGAAAGAGAAAAATGTGCCCTGTACAGTTTGCAATGAAAagttttttgataattatctATTAAGACTTCACATGGTAAAGCATAAAGGCGAAAGAAAGTTCAGTTGTGAGGTATGTGGTAAAGCGTTTTTGAGGCGCAGTAATTTAAGCGCTCACACAgaaatgcataaaaaatatggccATGTTTAA
Protein Sequence: MRLRNRQEGKHTKSHGLCSTSDYALKLIKGSHIEVKIDVSEIACDICYEPLTCFDEVVDHLTNKHELEYDKSIDIPIQEYQLSDCRCRICGQEFTYFGYLIQHTNIAHAQNTFICDNCGEKFSKKRDLAIHMRRYHQEGGYPCDECSDFFDSYILLSKHKNNFHFRRCKICDLRFPSYTLLRRHIKCDHSDDNCPYCSKKCQTSQGLKQHITKCSKRCDIKVKQAFDEETIQPNKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKQHVVEAHPTCDLKEKCMKNCKGERISVKIDISSLSCRVCSESIDNVDSLIDHLITKHGAEYDKATTGCFESFKIIKDSIPCPICSTIFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGVKYKNQWCLGRHKAKSHNAKDFQCTKCSERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFSCEVCGKAFLRRSNLSAHTEMHKKYGHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00778910;
90% Identity: iTF_00778910;
80% Identity: iTF_00778910;