Hhew000490.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius hewitsoni
Gene Symbol
sip1
Assembly
GCA_018230445.1
Location
DWAN01000206.1:10738-17249[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-55 2.9e-51 175.3 4.3 5 275 368 620 364 620 0.96

Sequence Information

Coding Sequence
atgtcagATGACGAGGTTATACGTTTTGAAATTACTGACTACGATTTAGATAATGAATTTAATCCTAACAGAAGTCGTAGAGCTAAAAAAGAACAGCAAATATATGGTGTATGGGCAAAAGATAGTGACGAAGAAGACAATGAAGATAATGTTAGGCAAAGAAATCGAAAACCTAAAGATTTTTCTGCACCTATTGGATTTGTTGCTGGAGGAGTACAACAGGCTGGCAAGAAGAAGGAAGAGAAAAAAGaaatacaagaaaaatcaGAAGCATCCACATCAAGAACTAAGTACATAAATAGTTCAGATGAGGAAGTACAAACACCAGATGAAACCGAGACTGCGGGTATTCGGCGAGCTGGTCAAGGTATGAGGGGAGTGAACCTCGGCAGCAATGTTGGTAGTTGGGAGAAACATACAAAGGGGATAGGAGCCAAGTTATTGTTGCagATGGGTTACCAACCAGGTAAAGGTCTTGGTAAAGACCTTCAAGGTATATCAGCACCAGTGGAAGCGACTATGAGGAAAGGGAGAGGAGCTATAGGAGCATATGGACCTGAAAAAGCTGcacaaaaagctaaaaaagaagaagagaaaagactaaaagaaaaagaagaggAGAATAAAGGGTCTAAAGAGAAGACTTACAATTGGAAAAAGTCACACCAAGGCCGCTACTTCTATAAAGATGCGGCAGATGTTATTCAAGAGGGCAAACCTACTATGCATACTATAAGCagCAACGAGCTGTCCCGCGTGCCGGTGATAGACCTGACGGGGCGCGAGCGCAAGGTGCTGAGCGGCTACCACGCGCTgcgcgccgccgcgccgcgctACGAGCACGAGCCGCGCCGCGCCTGCACGCGCTTCCAGCTGCCCGAGCTCACGCACAACCTGCAGCTCATGCTGGCCTGCTGCGAGCAGGACATAATACAAAATGCTCGAGAACTACAGCAAGCAGAAGATGAAATTGTAGTCCTAGAACGAGATTTAGAAGATTGCAACGTGAAGGTCAAAGAAGAAGACCAAGTGATACAGAAGATGCAAGAAATTCTCACAAGAGTTGAGAAGTTGAAACCAGATGTATCTTTAGAAGATGCGTTTGAAATATTGACTGAATTGAAGGAAACTTACCCACTAGAGTACGACATGTTTGCAATACCAAATGTCGTTCTCAGTGTAATATCGCCGCTCCTAAGCGCTCTGTTCGCTCAGTGGAGTCCGTTAGAGGCGCCCGAACGAGTGCTACCAGCCGTGGTGAAGTGGCGTGAGCTGTTGGGCGAGGAAGTCTACGGGGCGTTGCTAGTGCAGCACTTTGTACCCGCTGTTGCTGCTGCTGCAgaGAGCTGGGACCCGCGCCGGCCGGAGGCCATGCTGGCGCTGGCGCGCGCGTGGCGCGGTGCGAGCCCCGCGTGGCTGCTGCGCGCCGGCGTGGCGCGCCACGTGCTGCCGCGCGTGCTGGCCGCGCTGCGCGCCTGGGACCCCACGCGCGACACGCTGCCCGTGCACGCCTGGGTGCTGCCCTGGCACGACTACGCCGCCTCGGAGCTGAGCGCGTCGGCGTACCCGCTGATCCGCTCGCGGCTGGCCAGTGCGCTGGCGGCGTGGCACCCGGCGGACGCGTCGGCGCGGCCGCTGCTGGCGGCGTGGCGCGGCGCCTGGGGGCCCGCGCTGGCGCCGCTGCTGCACCACCACGTCGTGCCCAAGCTGGAGCACTGCCTGCAGGCCGCGCCCCTCGACCTGCGCGCGGCGGACAACGCCGCGTGGCGCTGGTGCGTGGAATGGTCGGAGCTAATAGGTGCACCCACGTTAGCTGCGGTCGCCTCAAGAGCTTTGCTACCACGGTGGTTGGCGGCGCTCGCTGCGTGGCTCAACACCGCACCTCCACATGCTACCGTTTTGGCCGCTTATAGTAACTTTAAgAAAACATTCCCCGAAGACATCCTTCGTGAGCCAGCAGTCCGAGATGCCTTCAGAAAGGCCTTGGACATGATGAACAGAAGCACAGATATTGACTCTATAgaaccaccaccaccaccacgtTTCTCCATGCCCGAAATTAAAGATACTCCGAAAATTGACATATCTTCAATTACCCAGCAGAAGAGCTTTTCGGAACTTCTAGAGTCTAAGTGTATTGAAAAAGGGATTACGTTTGTCCCGATACAAGGGAAGACTAGAGAGGGAAGACCTTTGTACAAGATAGGGAAATTACAGTGTTACGTGATAAGGAATGTTATAATGTATTCAGATGATGGTGGTAGGACATTCTCGCCGGTGGGTTTGGAGAAACTTCTGAATATGGTTGAAGagtga
Protein Sequence
MSDDEVIRFEITDYDLDNEFNPNRSRRAKKEQQIYGVWAKDSDEEDNEDNVRQRNRKPKDFSAPIGFVAGGVQQAGKKKEEKKEIQEKSEASTSRTKYINSSDEEVQTPDETETAGIRRAGQGMRGVNLGSNVGSWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATMRKGRGAIGAYGPEKAAQKAKKEEEKRLKEKEEENKGSKEKTYNWKKSHQGRYFYKDAADVIQEGKPTMHTISSNELSRVPVIDLTGRERKVLSGYHALRAAAPRYEHEPRRACTRFQLPELTHNLQLMLACCEQDIIQNARELQQAEDEIVVLERDLEDCNVKVKEEDQVIQKMQEILTRVEKLKPDVSLEDAFEILTELKETYPLEYDMFAIPNVVLSVISPLLSALFAQWSPLEAPERVLPAVVKWRELLGEEVYGALLVQHFVPAVAAAAESWDPRRPEAMLALARAWRGASPAWLLRAGVARHVLPRVLAALRAWDPTRDTLPVHAWVLPWHDYAASELSASAYPLIRSRLASALAAWHPADASARPLLAAWRGAWGPALAPLLHHHVVPKLEHCLQAAPLDLRAADNAAWRWCVEWSELIGAPTLAAVASRALLPRWLAALAAWLNTAPPHATVLAAYSNFKKTFPEDILREPAVRDAFRKALDMMNRSTDIDSIEPPPPPRFSMPEIKDTPKIDISSITQQKSFSELLESKCIEKGITFVPIQGKTREGRPLYKIGKLQCYVIRNVIMYSDDGGRTFSPVGLEKLLNMVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00457246; iTF_00782655; iTF_00621248; iTF_00248097; iTF_00247208; iTF_00723080; iTF_00159855; iTF_00212482; iTF_00213461; iTF_00780264; iTF_00775265; iTF_00774502; iTF_00781038; iTF_00781843;
90% Identity
iTF_00782655;
80% Identity
-