Basic Information

Insect: Heliconius hermathena
Gene Symbol: stc
Assembly: GCA_013403705.1
Location: JAAIXJ010000066.1:193036-203705[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2e+04 -4.2 1.6 15 19 497 501 496 501 0.81

2 12 0.062 6.3e+02 0.7 1.7 2 10 529 537 529 537 0.92

3 12 3.4e-05 0.35 11.1 18.1 4 19 545 560 543 560 0.93

4 12 1.3e-07 0.0013 18.9 13.9 1 18 596 613 596 614 0.99

5 12 0.88 8.9e+03 -3.0 0.3 8 11 619 622 618 622 0.86

6 12 6.3e-05 0.64 10.3 12.3 1 19 655 673 655 673 0.99

7 12 0.014 1.4e+02 2.8 7.3 1 11 693 703 693 704 0.93

8 12 0.039 3.9e+02 1.4 0.5 4 10 708 714 707 715 0.93

9 12 3.4e-06 0.035 14.3 14.0 3 19 722 738 720 738 0.92

10 12 0.00026 2.7 8.3 9.2 9 18 784 793 782 794 0.92

11 12 1.1e-07 0.0011 19.1 14.0 1 17 830 848 830 854 0.83

12 12 0.00027 2.7 8.3 6.9 1 13 860 871 860 872 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2e+04	-4.2	1.6	15	19	497	501	496	501	0.81
2	12	0.062	6.3e+02	0.7	1.7	2	10	529	537	529	537	0.92
3	12	3.4e-05	0.35	11.1	18.1	4	19	545	560	543	560	0.93
4	12	1.3e-07	0.0013	18.9	13.9	1	18	596	613	596	614	0.99
5	12	0.88	8.9e+03	-3.0	0.3	8	11	619	622	618	622	0.86
6	12	6.3e-05	0.64	10.3	12.3	1	19	655	673	655	673	0.99
7	12	0.014	1.4e+02	2.8	7.3	1	11	693	703	693	704	0.93
8	12	0.039	3.9e+02	1.4	0.5	4	10	708	714	707	715	0.93
9	12	3.4e-06	0.035	14.3	14.0	3	19	722	738	720	738	0.92
10	12	0.00026	2.7	8.3	9.2	9	18	784	793	782	794	0.92
11	12	1.1e-07	0.0011	19.1	14.0	1	17	830	848	830	854	0.83
12	12	0.00027	2.7	8.3	6.9	1	13	860	871	860	872	0.95

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCATACAACTACAATAATCAATATCAACCTCCTAATAATTGGAATGgtgaatataataatcaatatgcAAACCAATCATACTATCCTAATAGGCAATATGACCACAGCAATCAGTATGTTAGCTTTGATGAATTTTTATCTCAAATGCATATCTCAAATGTTCCTCAATCAAATCACGCTAActacaataatatacaatatcaaAACTATCCCAATACTCAATTTAACAATGTACCTAGTTATCATAATGGAGCTACAGCTCAGAGTTCTCAGTCAGAATATATGTATGCATCAAACACTGCCAATTTTCCCAATAATGAAGAGTCCTACCAACCCAGTACACAAAATCAATATAATGTTAACCCAGTAAActcaaatgaaaacaattatacTAATGAAGtagtttttaaatcaaaattaacacCAACAGCAACTGAATTTGTTCCTAAAAACTCTCAAGACAAACCTGATAGTAGCCCTAATAAGGAAATTGTACAGGAATCAAATTCATCAAGTACTACATTAAGCGAATTGTCTAGTAATTATTCTAAGCCATCAAGTTCAACAAATTGGAGAGAGAGGCCCCAAAGTTCCCAACAAGGTAGCGCTTCATCTTTTGTAGAGAACAATTCATTTCAAAAACCTAGACCTCAAGATTTGAATAGCAGAAATAGGGAATCAAAATATGAATCTAAGAATCGTAATCAAGAATATCCTAATAGCCATAATGACTCAGTTAATTATAGCTCTAACTCTAAGAACAACAAAGACTCTACAAACCGTCCCAATGAATCACACCGTATGCGTAACCGTAAATCCAAAAACCGTTCTGCTGACAACAATCATGATGGAATCCATAGAAACCATGATAATCTAGAGCATGGTAATAACCACAGATATCGTAATAATGACTCGAACACATACAATCAAGAAGCTACAGGCTATCAGGATGAACCAAACCATGTCCAAGAGACTAATAACTTTGAAGGGGGCCAATCTAAACATTCTAAGGCTAAAAATAAAGAGTCTGATGTAGGGCgtactttttataatagctCTATGCCTAAAGAAAGTCAAGACGTAAGAAATGGGAGGGAGAGTCATGGAAAGGGTCGCAAATGGGCCGGAAGTCAACGAGTTAGACCTGTGGAACGTAGCTATGTTGAAGACGAACAATACGCTGATTCGTATTTGCAATACAGAGAAGAAAGGAATAGAGATAATGTACCTAATAGTCCTATGAAAGGAAGACACAAATCGTCTATGATgtcagCTTCAGCGAATACAGATATGACACAGCGAGAGCGTCTCAGTGAACAGTTGGACAAAGGGACTCTAGAATGTCTTGTATGCTGTGAGAGAGTGAAGCAGATAGACCCAGTGTGGTACTGCGGCAACTGTTATCATGTGTTCCATTTAAGTTGTACTAGAAAATGGGCTATGAGTAGCATGGTTGAAAGCAAATGGCGCTGTCCAGCCTGTCAAAATACAAACCAAGCTGTACCAACAGAGTACAGATGCATGTGTGGGACGGTCCGCAACCCAGAGTACCAGAGGGGCTCCAGTGGTGCCCACACTTGTGGCAAATCTTGCAAGAGACCCAGAAACTGTCCCCACCCGTGTACATTGCTTTGTCATCCTGGCCCTTGTCCTCCTTGCCAGGCCACTGTTAGCAAgCAATGCGGGTGTGGTGCTGAGACACGCTCAGTGCTCTGCAGCAGCAAGTTACCACAGGTGTGTGGAAGGGAGTGCCGTAAGAAACTTGAATGTGGTGTTCATTCTTGTATGAAGGACTGTCATGAGGGACCTTGTGATCCTTGCGGAGAGACTGTTACTCAAGTATGCCACTGCCCAGCAGCCAGCGCCCGCTCCGTGGCCTGTACGTCGCTGACGGGCGGCACGCGGGCGTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCAGCGCGTGCCACGCGCCGCCCTGCGCGCCGTGCCCGCTCAGGCCCGACAACGTGAGGAGCTGCCCCTGTGGTGGGACTAGGTGGAAGCTATCTTGCGGCCGTCACCGCTGTCGTACAGCGTGCTGTGCGGCCACGTCCCACCGCTGCACAGTTGTGTGCGGTCGCACATTATCCTGTCAACTGCACAGATGCGAGGAGTTCTGCCATACTGGGCATTGTGCACCATGTCCCAGAGTTAGTTTCGAAGAGCTCCGTTGCGAGTGTGGTACTGAGGTCATCCTGCCCCCAGTCCGCTGCGGTACTAAACCGCCGCCCTGCAGCGCCCcctgccgccgccgccgcgcctgCGACCACCCGCCGCACCACGCGTGCCACTCCGGGGATTGCCCGCCGTGCGTCGTGCTCACCACCAAACGGTGCTACGGTGACCACGAGGAACGTAAAACAATACCATGTTCTCAAGAGCAGTTCTCATGCGGTCTACCTTGTGGAAAGCCGCTGCCTTGCGGGAAGCATACCTGTATTAAGAAATGTCACACGGGCCCTTGTGATGCTGGCAAATGTACCCAACCCTGTACCGAGAAACGTCCATCGTGCGGTCATCCATGCGCCGCCCCGTGTCACACCGGCTCCGCGCACACCGCGCCCACGACGTGCCCCAGCGCCGCGCCCTGCCGCCGCCCCGTGCGCGCCACATGCCCCTGCGACAGACGCGCCGCGGAGAGGGCGTGCTGTGACAACGCGAGGGATTATGCCAAAATGATGAGCACGCTAGCTGCATCGAAAATGCAAGAGGGTGGGACCGTTGACTTGTCTGATCCGCAACGTCCAGGGAACATgttaaaaacGCTAGAATGCAATGAAGAATGTCTAGTCGAAGCTCGCTCACGGCGTTTAGCGCTGGCTTTACAGATACGTAACCCGGACGTGTCCGCAAAGTTAGCGCCGCGCTACAGCGAACATGTCCGCGCAACCGCAGTAAGAGATCCAGCGTTTGCACAACTTGTACATGATCGATTGACTGATCTAGTGCAACTTGCTAAAAAGtCCAAGCAAAAGACGCGTGCGCACTCTTTTCCCTCAATGAACCGTCAAAAGAGACAGTTCATTCACGAGCTTTGTGAACATTTTGGCTGTGAAAGTGTGGCGTACGACGCGGAGCCTAATAGGAATGTAGTGGCCACGGCTGATAAGGAAAAGTCATGGTTACCAGCAATGAGCGTGTTAGAAGTGTTAGCGCGTGAAGCGGGCAAGCGTCGCGTGCCGGGACCCGTACTGCGTGCTCCGCCTTCCGCAAGCGCTGCTACTAAATCGTCTGGTGGTTGGGCGACGCTAACATCGAACAACGCGTGGGCGGCCCGCAGTCAAGCAGCAGCGAAGCAGGAGCCCAAGATCGACTACTTCGATAACCCGCCAGAAAACTGA
Protein Sequence: MSQWNNSYNYNNQYQPPNNWNGEYNNQYANQSYYPNRQYDHSNQYVSFDEFLSQMHISNVPQSNHANYNNIQYQNYPNTQFNNVPSYHNGATAQSSQSEYMYASNTANFPNNEESYQPSTQNQYNVNPVNSNENNYTNEVVFKSKLTPTATEFVPKNSQDKPDSSPNKEIVQESNSSSTTLSELSSNYSKPSSSTNWRERPQSSQQGSASSFVENNSFQKPRPQDLNSRNRESKYESKNRNQEYPNSHNDSVNYSSNSKNNKDSTNRPNESHRMRNRKSKNRSADNNHDGIHRNHDNLEHGNNHRYRNNDSNTYNQEATGYQDEPNHVQETNNFEGGQSKHSKAKNKESDVGRTFYNSSMPKESQDVRNGRESHGKGRKWAGSQRVRPVERSYVEDEQYADSYLQYREERNRDNVPNSPMKGRHKSSMMSASANTDMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCGNCYHVFHLSCTRKWAMSSMVESKWRCPACQNTNQAVPTEYRCMCGTVRNPEYQRGSSGAHTCGKSCKRPRNCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLPQVCGRECRKKLECGVHSCMKDCHEGPCDPCGETVTQVCHCPAASARSVACTSLTGGTRAWSCGAECARVLACGAHVCRSACHAPPCAPCPLRPDNVRSCPCGGTRWKLSCGRHRCRTACCAATSHRCTVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCECGTEVILPPVRCGTKPPPCSAPCRRRRACDHPPHHACHSGDCPPCVVLTTKRCYGDHEERKTIPCSQEQFSCGLPCGKPLPCGKHTCIKKCHTGPCDAGKCTQPCTEKRPSCGHPCAAPCHTGSAHTAPTTCPSAAPCRRPVRATCPCDRRAAERACCDNARDYAKMMSTLAASKMQEGGTVDLSDPQRPGNMLKTLECNEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRATAVRDPAFAQLVHDRLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPSASAATKSSGGWATLTSNNAWAARSQAAAKQEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213096;
90% Identity: iTF_00775749; iTF_00775748;
80% Identity: -