Basic Information

Insect: Heliconius charithonia
Gene Symbol: stc
Assembly: GCA_030704555.1
Location: JALPMF010000029.1:136410-145050[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 2.6e+04 -4.3 1.6 15 19 497 501 496 501 0.81

2 14 0.1 8.7e+02 0.6 1.7 2 10 529 537 529 537 0.92

3 14 5.5e-05 0.49 11.0 18.1 4 19 545 560 543 560 0.93

4 14 3e-07 0.0027 18.2 15.2 1 18 596 613 596 614 0.99

5 14 1.4 1.2e+04 -3.1 0.3 8 11 619 622 618 622 0.86

6 14 0.00042 3.6 8.2 12.5 1 19 655 673 655 673 0.99

7 14 2e-05 0.18 12.4 11.4 1 19 714 736 714 736 0.88

8 14 3 2.6e+04 -4.8 1.7 6 10 766 770 766 770 0.95

9 14 0.023 2e+02 2.7 7.3 1 11 776 786 776 787 0.93

10 14 0.062 5.5e+02 1.3 0.5 4 10 791 797 790 798 0.93

11 14 5.5e-06 0.049 14.2 14.0 3 19 805 821 803 821 0.92

12 14 0.00043 3.8 8.2 9.2 9 18 867 876 865 877 0.92

13 14 1.7e-07 0.0015 19.0 14.0 1 17 913 931 913 937 0.83

14 14 0.00018 1.6 9.4 5.7 1 13 943 954 943 956 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	2.6e+04	-4.3	1.6	15	19	497	501	496	501	0.81
2	14	0.1	8.7e+02	0.6	1.7	2	10	529	537	529	537	0.92
3	14	5.5e-05	0.49	11.0	18.1	4	19	545	560	543	560	0.93
4	14	3e-07	0.0027	18.2	15.2	1	18	596	613	596	614	0.99
5	14	1.4	1.2e+04	-3.1	0.3	8	11	619	622	618	622	0.86
6	14	0.00042	3.6	8.2	12.5	1	19	655	673	655	673	0.99
7	14	2e-05	0.18	12.4	11.4	1	19	714	736	714	736	0.88
8	14	3	2.6e+04	-4.8	1.7	6	10	766	770	766	770	0.95
9	14	0.023	2e+02	2.7	7.3	1	11	776	786	776	787	0.93
10	14	0.062	5.5e+02	1.3	0.5	4	10	791	797	790	798	0.93
11	14	5.5e-06	0.049	14.2	14.0	3	19	805	821	803	821	0.92
12	14	0.00043	3.8	8.2	9.2	9	18	867	876	865	877	0.92
13	14	1.7e-07	0.0015	19.0	14.0	1	17	913	931	913	937	0.83
14	14	0.00018	1.6	9.4	5.7	1	13	943	954	943	956	0.96

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCATACAACTACAATAATCAATATCAACCTCCTAATAACTGGAATGgtgaatataataatcaatatgcAAACCAATCATACTATCCTAATAGGCAATATGACCACAGCAATCAGTATGTTAGCTTTGATGAATTTTTATCTCAAATGCATATTTCGAATGTTCCTCAATCAAATCACGCTAACTACAACAATATACAGTATCAAAACTATCCCAATACTCAATTTAACAATGTACCTAATTATCATAATGGAGCTACAGCTCAGAGTTCTCAGTCAGAATATATGTATGCATCAAACACTGCCAATTTTCCCAATAATGAAGAGTCCTTCCAACCTAGTACACAAAATCAATATAATGTTAACCCAGTAAActcaaatgaaaacaattatacTAATGAAGTAGTTTTTAAATCAAAGTTAACACCAACAGCAACTGAATTTGTTCCTAAAAACTCTCAAGACAAACCTGATAGTAGCCCTAATAAGAAAATGGTACAGGAATCAAATTCATCAAATACTGCATTAAGTGAATCGTCTAGTAATTATTCTAAGCCATCAAGTTCAACAAATTGGAGAGAGAGGCCCCAGAGTTCCCAACAAGGTAGCACTTCATCTTTTGtagaaaacaattcatttcaaAAACCTAAACCTCAAGATTTGAATAGCAGAAATAGAGAATCAAAATACGAATCTAAGAATCGTAATCAAGAATATCCTAATAGCCATAATGACTCAGTTAGTTATAGCTCTAACTCTAAGAACAACAAAGACTCTACAAACCGTCCCAATGAATCACACCGTATGCGTAACCGTAAATCCAAAAATCGTTCAGCTGACAACAATCATGATGCAATCCATAGAAATCATGATCATCTAGAGCACAGTAATAACCACAGATATCGTAATAATGACTCGAACTCATACAATCAAGAAGCTACAGGCTATCAAGATGAACCAAACCACGTCCAAGAGACTAATAACTTTGAAGGGGGCCAATCTAAACATTCTAAGGCTAAAAATAAAGAGTCTGATGTAGGGCGTACTTTTTATAATAGCTCTATGCCTAAAGAAAGTCAGGATGTAAGAAATGGGAGGGAGAGTCATGGAAGAGGTCGCAAATGGGCCGGAAGTCAACGAGTTAGACCTGTGGAACGTAGCTATGTTGAAGACGAACAATACGCTAATTCGTATTTGCAATATAGAGAAGAAAGGAATAGAGATAATGTGCCTAATAGTCCTATGAAAGGAAGACACAAAACATCTATGGTgtcagTTTCAGCGAATACAGATATGACACAACGAGAACGTCTCAGTGAACAATTGGACAAAGGGACTTTAGAATGTCTGGTATGCTGTGAGAGAGTGAAGCAGATAGACCCAGTGTGGTACTGCAGCAATTGTTATCATGTGTTCCATTTAAGTTGTACTAGAAAATGGGCTATGAGTAGCATGGTTGAAAGCAAATGGCGCTGTCCAGCCTGTCAAAACACAAACCAAACTGTACCAACAGAGTACAGATGCATGTGTGGGACAGTCCGCAACCCAGAGTATCAGAGGGGCTCTAGCGGTGCCCACACTTGTGGCAAATCTTGCAAGAGACCCAGAAACTGTCCCCACCCGTGTACACTGCTCTGTCACCCTGGCCCTTGTCCTCCTTGCCAGGCCACTGTTAACAAgCAATGCGGGTGTGGTGCTGAGACACGCTCAGTGCTGTGCAGCAGCAAGTTACCACAAGTGTGTGGAAGGGAGTGCCGTAAGAATCTTGAATGCGGTGTACATTCCTGTACTAAGGACTGTCATGAGGGTCCTTGTGATCCTTGCGGAGAGACTGTTACTCAAGTGTGCCACTGCCCAGCAGCCAGCACTCGTTCCGTGCCCTGTACGTCGCTGACGGGCGGCACGCTCGCGTGGTCGTGCAGCGCGGAGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCACCGCGTGCCACGCGCCGCCGTGCGCGCCGTGCCCACTGAGGCCCGACAACGTTAGGAGCTGTCCCTGTGGTGGCACCAGAATTCATAAGGATCAACGGAAGTCATGCACAGATCCGATACCGCTGTGTGGTAACATTTGCACTAAGCCTTTGCCCTGCGGTCCTCCGGGAGACAAACATTTTTGTAAGGAAAGCTGTCATGAtgGTGCGTGTCGCGTGTGTCCCGACACAACGCTACTACAGTGTCGGTGTGGCCACTCCAGTCGAGAGGTGCCTTGTGCTGATCTACcagaaatgtataataatgtgTTGTGCCAGAGGAAATGTAATAAGAAGTTGTCCTGCGGCCGTCATCGCTGTCGCACAGCATGCTGTGCGGCCGCGTCCCACCGCTGCACAGTCGTGTGCGGTCGCACATTATCCTGTCAACTGCACAGATGCGAGGAGTTCTGCCATACTGGGCATTGTGCACCGTGTCCCAGAGTTAGTTTCGAAGAGCTCCGTTGTGAGTGTGGTACAGAGGTCATCCTGCCCCCAGTCCGCTGCGGTACTAAGCCCCCGCCCTGCAGCGCCCcctgccgccgccgccgcgcctgCGACCACCCCCCGCACCACGCGTGCCACTCCGGGGACTGCCCGCCGTGCGTCGTGCTCACCACGAAGCGGTGCTACGGCGACCACGAGGAACGTAAAACCATACCATGTTCTCAAGAGCAGTTTTCATGCGGTCTGCCTTGTGGAAAACCACTGCCTTGCGGGAAGCATACCTGTATTAAAAAATGCCACACGGGCCCCTGTGATGCTGGCAAATGTACCCAACCCTGTACCGAGAAACGTCCGTCGTGCGGTCATCCATGCGCCGCCCCGTGCCACACCGGCtccgcgcgcgccgcgccctcCGCGTGCCCCAGCGCCGCGCCCTGCCGCCGCCCCGTGCGCGCCACCTGCCCCTGCGCCAGACGCGCCGCGGAGCGGGCCTGCTGCGACAACGCGAGGGACTACGCCAAAATGATGAGCACACTAGCTGCATCGAAAATGCAAGAGGGTGGGACCGTTGACTTGTCTGATCCTCAACGTCCAGGGAACATGTTAAAAACTCTAGAATGCGATGAGGAATGTCTAGTCGAAGCTCGCTCACGGCGTTTAGCGCTGGCTTTACAGATACGTAACCCGGACGTATCCGCAAAGTTAGCGCCGCGCTACAGCGAACATGTCCGCGCAACCGCAGTGAGAGATCCAGCGTTTGCACAACTTGTACATGATCGATTGACTGATCTAGTGCAACTTGCTAAGAAGtCCAAGCAAAAGACGCGTGCGCACTCTTTTCCCTCAATGAACCGTCAGAAGAGACAGTTCATTCACGAGCTTTGTGAACATTTTGGCTGTGAAAGTGTTGCGTACGATGCGGAGCCTAATAGAAATGTAGTGGCCACGGCTGATAAAGAAAAGtcATGGTTACCAGCAATGAGCGTGTTAGAAGTGTTAGCGCGTGAAGCGGGCAAGCGTCGCGTGCCGGGACCCGTACTGCGTGCTCCGCCTTCCGCAAGCGCTGCTACTAAATCGTCTGGTGGTTGGGCGACGCTAACATCGAACAACGCGTGGGCGGCCCGCAGTCAAGCAGCAGCGAAGCAGGAGCCCAAGATCGACTATTTCGATAACCCGCCAGAAAACTAA
Protein Sequence: MSQWNNSYNYNNQYQPPNNWNGEYNNQYANQSYYPNRQYDHSNQYVSFDEFLSQMHISNVPQSNHANYNNIQYQNYPNTQFNNVPNYHNGATAQSSQSEYMYASNTANFPNNEESFQPSTQNQYNVNPVNSNENNYTNEVVFKSKLTPTATEFVPKNSQDKPDSSPNKKMVQESNSSNTALSESSSNYSKPSSSTNWRERPQSSQQGSTSSFVENNSFQKPKPQDLNSRNRESKYESKNRNQEYPNSHNDSVSYSSNSKNNKDSTNRPNESHRMRNRKSKNRSADNNHDAIHRNHDHLEHSNNHRYRNNDSNSYNQEATGYQDEPNHVQETNNFEGGQSKHSKAKNKESDVGRTFYNSSMPKESQDVRNGRESHGRGRKWAGSQRVRPVERSYVEDEQYANSYLQYREERNRDNVPNSPMKGRHKTSMVSVSANTDMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCSNCYHVFHLSCTRKWAMSSMVESKWRCPACQNTNQTVPTEYRCMCGTVRNPEYQRGSSGAHTCGKSCKRPRNCPHPCTLLCHPGPCPPCQATVNKQCGCGAETRSVLCSSKLPQVCGRECRKNLECGVHSCTKDCHEGPCDPCGETVTQVCHCPAASTRSVPCTSLTGGTLAWSCSAECGRVLACGAHVCRTACHAPPCAPCPLRPDNVRSCPCGGTRIHKDQRKSCTDPIPLCGNICTKPLPCGPPGDKHFCKESCHDGACRVCPDTTLLQCRCGHSSREVPCADLPEMYNNVLCQRKCNKKLSCGRHRCRTACCAAASHRCTVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCECGTEVILPPVRCGTKPPPCSAPCRRRRACDHPPHHACHSGDCPPCVVLTTKRCYGDHEERKTIPCSQEQFSCGLPCGKPLPCGKHTCIKKCHTGPCDAGKCTQPCTEKRPSCGHPCAAPCHTGSARAAPSACPSAAPCRRPVRATCPCARRAAERACCDNARDYAKMMSTLAASKMQEGGTVDLSDPQRPGNMLKTLECDEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRATAVRDPAFAQLVHDRLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPSASAATKSSGGWATLTSNNAWAARSQAAAKQEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213096;
90% Identity: iTF_00778484;
80% Identity: -