Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000024.1:328315-335719[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 5.9e-05 0.0042 17.6 0.6 1 23 184 206 184 206 0.98

2 30 0.0013 0.089 13.5 0.6 2 20 234 252 233 254 0.92

3 30 2.4e-05 0.0017 18.9 0.2 3 23 281 302 279 302 0.96

4 30 2.5 1.8e+02 3.1 0.5 2 12 323 333 322 335 0.86

5 30 0.0082 0.58 10.9 1.4 1 23 353 375 353 375 0.97

6 30 0.001 0.072 13.8 0.2 1 23 392 414 392 414 0.96

7 30 0.0003 0.021 15.4 3.0 2 23 454 475 453 475 0.96

8 30 0.00093 0.066 13.9 4.2 2 23 518 540 518 540 0.97

9 30 0.0023 0.16 12.6 1.1 1 23 590 613 590 613 0.94

10 30 0.002 0.14 12.9 0.3 1 23 665 687 665 687 0.97

11 30 0.0089 0.63 10.8 5.7 2 23 699 720 698 720 0.97

12 30 0.034 2.4 9.0 1.7 2 23 732 753 731 753 0.96

13 30 0.0018 0.13 13.0 0.7 1 23 763 785 763 785 0.98

14 30 0.0044 0.31 11.8 8.5 1 23 814 836 814 836 0.96

15 30 0.00083 0.058 14.0 2.5 1 23 847 869 847 869 0.96

16 30 0.00012 0.0082 16.7 1.4 1 23 877 899 877 899 0.97

17 30 0.0033 0.23 12.2 0.1 2 23 919 941 918 941 0.97

18 30 8.5 6e+02 1.4 0.2 1 10 959 968 959 981 0.88

19 30 0.058 4.1 8.2 4.6 1 23 988 1010 988 1010 0.98

20 30 0.013 0.91 10.3 0.8 2 23 1021 1043 1020 1043 0.95

21 30 0.0013 0.088 13.5 0.2 2 23 1066 1087 1065 1087 0.95

22 30 6.9 4.8e+02 1.7 5.9 2 23 1130 1152 1129 1152 0.94

23 30 0.013 0.89 10.3 0.3 2 23 1168 1189 1167 1189 0.94

24 30 3.1 2.2e+02 2.8 5.2 5 23 1199 1217 1197 1217 0.94

25 30 0.027 1.9 9.3 0.9 2 23 1228 1250 1227 1250 0.95

26 30 1.9 1.4e+02 3.4 6.2 2 23 1267 1285 1267 1285 0.88

27 30 0.11 7.7 7.4 1.1 2 21 1289 1308 1289 1309 0.93

28 30 0.93 65 4.4 1.1 2 23 1358 1379 1357 1379 0.93

29 30 0.0053 0.37 11.5 0.4 2 23 1390 1412 1389 1412 0.95

30 30 7.3 5.2e+02 1.6 5.1 2 21 1450 1469 1449 1470 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	5.9e-05	0.0042	17.6	0.6	1	23	184	206	184	206	0.98
2	30	0.0013	0.089	13.5	0.6	2	20	234	252	233	254	0.92
3	30	2.4e-05	0.0017	18.9	0.2	3	23	281	302	279	302	0.96
4	30	2.5	1.8e+02	3.1	0.5	2	12	323	333	322	335	0.86
5	30	0.0082	0.58	10.9	1.4	1	23	353	375	353	375	0.97
6	30	0.001	0.072	13.8	0.2	1	23	392	414	392	414	0.96
7	30	0.0003	0.021	15.4	3.0	2	23	454	475	453	475	0.96
8	30	0.00093	0.066	13.9	4.2	2	23	518	540	518	540	0.97
9	30	0.0023	0.16	12.6	1.1	1	23	590	613	590	613	0.94
10	30	0.002	0.14	12.9	0.3	1	23	665	687	665	687	0.97
11	30	0.0089	0.63	10.8	5.7	2	23	699	720	698	720	0.97
12	30	0.034	2.4	9.0	1.7	2	23	732	753	731	753	0.96
13	30	0.0018	0.13	13.0	0.7	1	23	763	785	763	785	0.98
14	30	0.0044	0.31	11.8	8.5	1	23	814	836	814	836	0.96
15	30	0.00083	0.058	14.0	2.5	1	23	847	869	847	869	0.96
16	30	0.00012	0.0082	16.7	1.4	1	23	877	899	877	899	0.97
17	30	0.0033	0.23	12.2	0.1	2	23	919	941	918	941	0.97
18	30	8.5	6e+02	1.4	0.2	1	10	959	968	959	981	0.88
19	30	0.058	4.1	8.2	4.6	1	23	988	1010	988	1010	0.98
20	30	0.013	0.91	10.3	0.8	2	23	1021	1043	1020	1043	0.95
21	30	0.0013	0.088	13.5	0.2	2	23	1066	1087	1065	1087	0.95
22	30	6.9	4.8e+02	1.7	5.9	2	23	1130	1152	1129	1152	0.94
23	30	0.013	0.89	10.3	0.3	2	23	1168	1189	1167	1189	0.94
24	30	3.1	2.2e+02	2.8	5.2	5	23	1199	1217	1197	1217	0.94
25	30	0.027	1.9	9.3	0.9	2	23	1228	1250	1227	1250	0.95
26	30	1.9	1.4e+02	3.4	6.2	2	23	1267	1285	1267	1285	0.88
27	30	0.11	7.7	7.4	1.1	2	21	1289	1308	1289	1309	0.93
28	30	0.93	65	4.4	1.1	2	23	1358	1379	1357	1379	0.93
29	30	0.0053	0.37	11.5	0.4	2	23	1390	1412	1389	1412	0.95
30	30	7.3	5.2e+02	1.6	5.1	2	21	1450	1469	1449	1470	0.92

Sequence Information

Coding Sequence: ATGGCTCTCAAACTTGGAAAGTGTAGGCTTTGCCTCAAACTCGGCGACTTTTATTCCATCTTCACGGTGGACAACAATTTACAGCTCGCTGAAATGGTTATGGAATGTGCCCGAGTAAAGATATGTGAAGGTGATGGACTTCCAGATAAAATTTGTAGTGAATGTATCCAGAAACTTAGCAGTGCCCATATATTTAAACAGCAATGTGAACGATCTGATCAAGAATTGAGGCGAAACTATATTCCACCTCCAGggTTTACTGCATCTACCCCTACTAGGCAAAGTAGTGAAGAACAATCAAAACCCTCTCCATCTTTCGAGGGTAAATTCACACCTTTACCCAAGACACGTAAAAGAAGTAGGGATAGTATAGACAATGTGTCAGTGGGCAGTCGTAATGAGTACCAACCAGGAAGCTCGAAACGTGTTGATGAATTACGTCTCTCACAGAAGAAAATAAGATTTTCTACAAATTCAGATTCTGAATTTGAAGACCACAACAGTGGATCAGTATATTCAGGAGGAACTGATTCTGATGAGCCATTACTGCATAAGTGCGATGAATGTGGGAAAGCATTTAAATCTGCCGTCAGTGTGGTTGCTCACAAAAAGAGTCACAGGCGAAGAAATGCCCAAAAACCTGTCTTAGTAGAACAACCCAAGGAGATCCAAGATGCTAATGACTCAGAGGATAAACTTAGCTGTGACAAATGTGGAAAAGAGTTTAAATTGAAGATAATGCTTAAACGCCACCACGAGATTTGTCCCAAATCGCCCAGAAAGGAGCTTATGGTGTCGTTAGAACCGATTGATGCTGTCCAACAGTCTATCAAAATAGATTGTCCAATGTGCTCGACGAAATTTAAGACCATTGAAAATTTGGAAAAACACATGAAGGTAGTTCACGCGGCAGTTCTTAAAAAGGAAGATACGTCGGTTAAAAACGAAAATGGAAAAATTTGCGTTCCATGCTTCTATTGCGGGGAGACTTTCGAAGATTATTATATTCACAGCGCGCATTTCAACGTTTGTCCCCAAAAAACAGACACCGTCACCTTCGAGTGTCCAGTGTGTAATAAAGTGATAACTAAAAAAGGTTGTTacttcttgcatttgaaagcaCATTTTTTTCCTGTTAGCTCGAGTAAAACGACTCCGGAGCCGGTGAAAAATTTTCAATGTCGCATGTGTAACAAAAAACTCCCGAGTCAAGATTCTTTAATTACACATCTAGCGGCTCATATGTCCAACATGGATGAAGCGGATGACGGCGGTGATGAAGAATCCAGAGCAAGTACAATGGAGGACTCGGCATCAATACATTCAGAGTACAGTGCTAACATATCGAGTGGACcacttaaatgtaaattttgtgaCAAATCCTTTAAATACAGAAAATCTCTATTGACCCATGAAATAAAACAcacagaagaaaatattaaaaaagaagtgCCAGACACTTCGACGGATCTGCTAAACGAAACCACACCTAATGATAGATATAACAATTACGATTCTGAATCTAGTCAAGATGACGGCGAGGATGATAATACATGCGATATATGTGAGAAGCAGTTCTCCTACAAACGGTTGCTTTTGCATCACAAACGTACAAAACACAACATGACGTCTGGTACAAAAAGagccaaaattaatttaaaagattgtTCTGTACGCTGTCTCATATGCGACATAGAAATGAAAGTGAGTGCCATCAACGAACATAACCAGACGCATATAAGTGTGAATATAAAGCCGAGGAATCAATACACTTGTATAGAATGCGGTCAGCAGTTCAAGAGTTGTAGTGCATTGGCCAATCATATAAAATTTGTGCATCGTTTAAAACAACCGCCTATAACGGTTGCGTCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACTTTGTCCAGAGTCACAACGGCTTAGAGGATTCCGCCGGTAATGGCACTCCCTTGGTCAATCTGAGTGGTTTTACTTGCACTATATGCAGTAAACAGTTGCCGACGCTAATATCGTTGAAGCGACATGTCAATTGGCACAACCATGTTGGCAAAAGTATGGAGAAAAAGCTGCAGTGTTTTGTTTGTCAAGAGaACTTCCGGTTTCAGTGTCACTACAAGGCGCACATGCGTGAACACTACAACGATACAAACCTCGATCCCAAATATTTGACTTGCTCGATCTGTAACAGGAAGAGCAAGCACCTGCGCGCCGCCCAGGCTCATATGAACTACCACAAGCAAACACGATTCCAGAACAAGGACTATGAGTGCTCCATATGCAAGAAAGTGTTTCAGTACAGAAAAGTCTACCTTTCCCACATGGCTATCCATTATAAACGAGGCGAGAGTGTCAACAATACTATAGTTGGCTCCGTACTGCCTAATTCAGTGGACAAAGATAAATTTGACGGAACCCATACTTGTCACCATTGTGGAAAAGTATGTGATTCAGAAAATTCATTAAAGCATCACATAATTTGGCATAAGTCTAAAACTTCGTTGTACGGCGCGAGGCATGCGTGTGATATATGCAATTTGCAGTTTACTAACAAAAGAAGGTTGGAACTACACACACGGACGCATTTTGAAGATGATAATGGACCTTTTAAATGTCACATATGTGGAAAAGGTTACATTGTAGAAGATTACTTTAAAAGACACGTTAAAGGGCACAATTTTGATCATCAATCACATAAAAAGAGGATAGAGAAGTTAAGGAAGAATAAAGTGAAATGTCCGATTTGTGCCCGCTTTTATCCAGACGTGGTAAAGCTTATTCGCCATTTACGTCGGACTCATCCTGAAAGTAAAATGATTAAAGAGGATCCGGACGCGCCGGCGCCTCGATATTACTCCTGCAAATTGTGCGCGAAAGTGTTCTTAGATGAAAAAAGATTGCAGTTCCATGAAGAAGCTCATCTGAGAAAGCCAGAATTCTTCAAATGCAAATTCTGTGGGAAAAAGACCATCTCTCTCAAAAACCATAGGGTGCACATAAAGAGTCATCTGACACAGAAATATATTGACGATCCCTTGAAATGTCCTCAGTGTGAAGAGAAATTTATGAGGGGCTACGATCTTCATTATCACTTAAGAGATGCTCATGGGATTAATGAAACATGGATAGCAGAGCGTGGGGTTCAAGCGCTGGACGGGCCTTTAAAGGAACTGCAGTGTTCCATTTGCTACAAAATATTGGCCACTAAAGGAAACTTCGAGAGACACATAGATTACCACAATTCACTAAGATGCAACTATTGCTTCGATTACTTCAGCTCCTTACGCTTTCTCGAAGGACATTTGGCGTTCAGCTGTGATAAAAAGAAACTCATTGGTGATACAGAAATACATCCAAGAAAAGTAAAGTGCCATATTTGTTACAAAGCATTCCATTTACAAGTAAAATTGGACTGCCACTTGCGAACGCAACACGGAATAAAAGTGTTTAAAGAAGCTTCCGAAACCAAAAAGGAACTAACGTGTGACTATTGCTTTAGAGTTTTTGAAAATGAGTACGCGTTAGGTAATCATAAGATCTACCACCGCACTATCGGGTACTTCGGTTGCATATACTGCAATAGGAAGTTTAATACAATGACGCTGTACAGAAAGCATAAGAATCATCATTTTGCACAATTAAATGTAGATGAGCCGACGAAATGTGAACATTGTGACGAGAAGTTCGTAGCGTTCAGAGAAATGATCTACCACATGAGAGACGTTCACGGGGATGATAAAGAATGGGTGGTACTACCCAAAGAGTCGATTGAAGAAAAGTGTAACATCTGTCATAAAACCTTCTTCAACCTTCACAAGCATTTGGCTTACCACGAGGAGAACAGGTGTAAGAAATGTGGAGAATATTTCTATTCGCGTTTGGACCTCGATAATCATTTATGTGCGATAGAAAGTGATGAGGAAGTCACCGAATCTAATAATGACGGACTTCGACAAGTTTACGACGAGTGTAGTTTCTGTTTCAAACCGGTCACTAAGAAGAATTCTAAAAAGAAACACGATCAAATCCATCGAGGTTCAGGGTCCATATCGTGTCGGTTCTGTTTCCTGAAGTTCAAAACAATGGATGCATTTAATATACACGCTTTCTCTCACAGAAgtagaaaatataacaaaaagccTATTAAATGTCGTAAATGCGGGGAGCAATTTGTTAAATACGGTCCGTTCATTAAACATATGAAACTAGTGCACAAGTCGTCGAAAAAAATGCATTACAGAGCCACCGTCATGCCCGAGACGTGTGTTGTTTGCAACGACAGCTTCCCCAATCTGCATAACCACTATCGAGCTCATTTACAAAATCAGTGCCACCAgtgctataaatatttcacctcgtTCAAAGTGTTCTCCCAACATCAATGCGATATAGAAGACTCGGATCCAAGTAAAGTTTTCACATCAGACGCAAATTTACCTCAACTCATAAATACTTATGTACCAAAAGACGTGAAGGACGATGAGAAGTATTACGGCCATGAAGAAACAGAAAGTGAAGAAGAAAAAGTAGTTGTAAGAgtagataaaaattatgtaagtaAAGTGGAAATGTTATCTCAAGATGAGGATAGTCAGAATTCAATTGATATAGACGAAGGGCAAGTACATGAAATGGTTCACACGCCTATTATTTCAGATGTACTTTCtctatataaaaagaaagatgataaaattattgataacgATAGTCCAAGCGTGAGCGGCAATGTTGTAATTTTGACAGATGACGAAGATTCTATAGGCTTTAAGGATACTGCAAGTGTTATAACGATAGAAGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKICEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYIPPPGFTASTPTRQSSEEQSKPSPSFEGKFTPLPKTRKRSRDSIDNVSVGSRNEYQPGSSKRVDELRLSQKKIRFSTNSDSEFEDHNSGSVYSGGTDSDEPLLHKCDECGKAFKSAVSVVAHKKSHRRRNAQKPVLVEQPKEIQDANDSEDKLSCDKCGKEFKLKIMLKRHHEICPKSPRKELMVSLEPIDAVQQSIKIDCPMCSTKFKTIENLEKHMKVVHAAVLKKEDTSVKNENGKICVPCFYCGETFEDYYIHSAHFNVCPQKTDTVTFECPVCNKVITKKGCYFLHLKAHFFPVSSSKTTPEPVKNFQCRMCNKKLPSQDSLITHLAAHMSNMDEADDGGDEESRASTMEDSASIHSEYSANISSGPLKCKFCDKSFKYRKSLLTHEIKHTEENIKKEVPDTSTDLLNETTPNDRYNNYDSESSQDDGEDDNTCDICEKQFSYKRLLLHHKRTKHNMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNQYTCIECGQQFKSCSALANHIKFVHRLKQPPITVASDLADFCEVVVTKAEPLDFVQSHNGLEDSAGNGTPLVNLSGFTCTICSKQLPTLISLKRHVNWHNHVGKSMEKKLQCFVCQENFRFQCHYKAHMREHYNDTNLDPKYLTCSICNRKSKHLRAAQAHMNYHKQTRFQNKDYECSICKKVFQYRKVYLSHMAIHYKRGESVNNTIVGSVLPNSVDKDKFDGTHTCHHCGKVCDSENSLKHHIIWHKSKTSLYGARHACDICNLQFTNKRRLELHTRTHFEDDNGPFKCHICGKGYIVEDYFKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARFYPDVVKLIRHLRRTHPESKMIKEDPDAPAPRYYSCKLCAKVFLDEKRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKSHLTQKYIDDPLKCPQCEEKFMRGYDLHYHLRDAHGINETWIAERGVQALDGPLKELQCSICYKILATKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEIHPRKVKCHICYKAFHLQVKLDCHLRTQHGIKVFKEASETKKELTCDYCFRVFENEYALGNHKIYHRTIGYFGCIYCNRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDEKFVAFREMIYHMRDVHGDDKEWVVLPKESIEEKCNICHKTFFNLHKHLAYHEENRCKKCGEYFYSRLDLDNHLCAIESDEEVTESNNDGLRQVYDECSFCFKPVTKKNSKKKHDQIHRGSGSISCRFCFLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEQFVKYGPFIKHMKLVHKSSKKMHYRATVMPETCVVCNDSFPNLHNHYRAHLQNQCHQCYKYFTSFKVFSQHQCDIEDSDPSKVFTSDANLPQLINTYVPKDVKDDEKYYGHEETESEEEKVVVRVDKNYVSKVEMLSQDEDSQNSIDIDEGQVHEMVHTPIISDVLSLYKKKDDKIIDNDSPSVSGNVVILTDDEDSIGFKDTASVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01079240;
90% Identity: iTF_00780441;
80% Identity: -