Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000337.1:123916-129673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00016 0.012 16.3 1.7 1 21 162 182 162 183 0.95

2 27 0.018 1.3 9.8 3.4 1 23 216 239 216 239 0.96

3 27 0.0081 0.57 10.9 0.5 3 23 246 266 245 266 0.96

4 27 0.64 45 5.0 5.6 3 21 271 289 270 290 0.94

5 27 0.0002 0.014 16.0 2.8 2 23 333 355 332 355 0.95

6 27 0.0033 0.24 12.1 0.3 1 23 388 410 388 410 0.98

7 27 0.00095 0.067 13.9 0.6 1 23 416 439 416 439 0.97

8 27 0.0022 0.15 12.7 1.2 2 23 449 471 448 471 0.96

9 27 0.00086 0.061 14.0 4.3 1 23 481 503 481 503 0.98

10 27 0.00079 0.056 14.1 1.4 2 20 617 635 616 637 0.93

11 27 0.17 12 6.7 0.6 3 23 670 691 669 691 0.96

12 27 0.00079 0.056 14.1 0.9 2 23 697 718 696 718 0.97

13 27 10 7e+02 1.2 5.6 1 21 721 741 721 742 0.94

14 27 0.00061 0.043 14.5 0.5 1 23 754 777 754 777 0.93

15 27 0.098 6.9 7.5 3.8 1 23 783 805 783 805 0.95

16 27 2.8 2e+02 2.9 0.5 1 23 839 862 839 862 0.87

17 27 6e-06 0.00043 20.8 0.2 3 23 869 890 869 890 0.99

18 27 0.00092 0.065 13.9 1.2 2 21 1000 1019 999 1020 0.94

19 27 0.4 28 5.6 0.1 3 23 1027 1048 1026 1048 0.96

20 27 0.4 28 5.6 2.1 1 23 1053 1076 1053 1076 0.96

21 27 0.00053 0.037 14.7 0.4 2 23 1082 1103 1081 1103 0.97

22 27 0.37 26 5.7 1.9 2 21 1107 1126 1107 1127 0.92

23 27 2e-05 0.0014 19.1 1.4 1 23 1153 1176 1153 1176 0.95

24 27 0.0013 0.091 13.4 0.4 1 23 1182 1204 1182 1204 0.92

25 27 0.097 6.9 7.5 0.1 1 23 1210 1232 1210 1232 0.97

26 27 0.00052 0.037 14.7 0.5 1 23 1238 1261 1238 1261 0.96

27 27 0.00025 0.018 15.7 1.7 2 23 1268 1290 1267 1290 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00016	0.012	16.3	1.7	1	21	162	182	162	183	0.95
2	27	0.018	1.3	9.8	3.4	1	23	216	239	216	239	0.96
3	27	0.0081	0.57	10.9	0.5	3	23	246	266	245	266	0.96
4	27	0.64	45	5.0	5.6	3	21	271	289	270	290	0.94
5	27	0.0002	0.014	16.0	2.8	2	23	333	355	332	355	0.95
6	27	0.0033	0.24	12.1	0.3	1	23	388	410	388	410	0.98
7	27	0.00095	0.067	13.9	0.6	1	23	416	439	416	439	0.97
8	27	0.0022	0.15	12.7	1.2	2	23	449	471	448	471	0.96
9	27	0.00086	0.061	14.0	4.3	1	23	481	503	481	503	0.98
10	27	0.00079	0.056	14.1	1.4	2	20	617	635	616	637	0.93
11	27	0.17	12	6.7	0.6	3	23	670	691	669	691	0.96
12	27	0.00079	0.056	14.1	0.9	2	23	697	718	696	718	0.97
13	27	10	7e+02	1.2	5.6	1	21	721	741	721	742	0.94
14	27	0.00061	0.043	14.5	0.5	1	23	754	777	754	777	0.93
15	27	0.098	6.9	7.5	3.8	1	23	783	805	783	805	0.95
16	27	2.8	2e+02	2.9	0.5	1	23	839	862	839	862	0.87
17	27	6e-06	0.00043	20.8	0.2	3	23	869	890	869	890	0.99
18	27	0.00092	0.065	13.9	1.2	2	21	1000	1019	999	1020	0.94
19	27	0.4	28	5.6	0.1	3	23	1027	1048	1026	1048	0.96
20	27	0.4	28	5.6	2.1	1	23	1053	1076	1053	1076	0.96
21	27	0.00053	0.037	14.7	0.4	2	23	1082	1103	1081	1103	0.97
22	27	0.37	26	5.7	1.9	2	21	1107	1126	1107	1127	0.92
23	27	2e-05	0.0014	19.1	1.4	1	23	1153	1176	1153	1176	0.95
24	27	0.0013	0.091	13.4	0.4	1	23	1182	1204	1182	1204	0.92
25	27	0.097	6.9	7.5	0.1	1	23	1210	1232	1210	1232	0.97
26	27	0.00052	0.037	14.7	0.5	1	23	1238	1261	1238	1261	0.96
27	27	0.00025	0.018	15.7	1.7	2	23	1268	1290	1267	1290	0.95

Sequence Information

Coding Sequence: ATGACCCGACAAGTCGATGTAAAGGCTCTAGTTTCGCACATAGTGCGCGGAGATGGCGCAAATAAGTGCCGAATATGTTTAGGAGATACAACGGAAGGACAAGTCTACTTAAGCGATACAGTGATGATGGATGGTGATAAAGCGGTTACTTTATCGGAAATATTGGAAACAATAACTGGAATAAagGTGGTGATGGAAGGGGACTTACCCGAGGGAGTGTGTCCTGAGTGCTCCAGATCAGCTATAAATGCTGCTGAGTTCAAATTATTGTGTCACGCAGCAGCTCAGCAATGGGATACTACTATAGCTCTTCTCCATGACCTGCCTACCCAATGCACAGACAATAGTACAGTTTTTGCTAtaattgacaaaaataaaatgattgctATTAATGATATGAAAAAATCATACAACCATACCACTGCAGCTCATagattaactaaatatttatccaAGTGCCCAGAACCAAAAAAGGATGGTACATATAAATGTCCAAATTGTGATAAATGTTTCTCAAGTCCAATAAAATTTAGTCTACATTTGAAAGAATCTCCAGATTTGCAACGAGCATGTTATGTATGTGGCACTATTGTATCTCAAAATATTTTGCTAAGTCATTTAATTAAGAAACATAAGGAAAAACCATTTAGTTGTAAGAAATGTACAGCAGTATTTCGTTCTTATAATCAATATATTCATCATGTGGAGAAAACTCATAAATTTGGTCGAGCATTCTGTGGTGATTGTGGACGTAGCTTTCAGTCACTTAATGCTTACCATGCTCATGTTTCAATACATGTATCTAAAAACTGTCCAAGCTGTGATAAACTATTCCGCAACCATTCCTGCTATATGCATCATACAAAGAACTGTTGTGAATTAAGCAGTAAGAAAAAAGTTatgaagagaaaaaagaaagttattatagaaattaataatgcAAAAAACAATCGTAAAATCAATGTAGGGCTTCGAGGAGCTACTTACAAAGAGTGTGTATGTGATTATTGTGGCAAAACGTTTGCCAGAAAGAAATTCATTTGTGCGCATATACAGATAGTCCACATGAAGAATACCCACCGTCCCTGCATTTACTGTGGAAAGCTGTTAGCATCAGCTCATATGTCAGAACATATCAAACAGCACAAGCCTGATCGTACCTTCACTTGTGAACAATGtggcataatattaaaaactaagttGGGATACAATCAACATATACGTCTTCATACTGGAGAAAGACCTTACGAATGTAAGCAATGTGGAGAAACATTCTCAGCATCATCTAGACGGTCGGAACATATACGGAAAGTTCACAAAACAAAAGATATAGTCCTGAAGCAGGAGTGTCACCTCTGTCCGGCCAAGTTCAGGTTGCCATATCGATTAAAAAATCATCTGAGATCAGTCCACAATGATGACCAGGATCAAACTCCTCAGTTTGAATGTGCTGTATGCCATGAGAAGTTCAGTTCATCCCGTGGACTGAATCATCATAGTCGGAAACATCAGAATGTGACATCTGTGGTGGACGAAACCGACTTCCCCGCGGCGTTGTGCTGCGTGTGCGCATATAACGCCATATCGGCGTGGCAGTTCAGACACCTATGCCATGAGTCGCACAACCATTGGACTAAAATTACAGAGGCCCTGATGATACCAGAAAATCCAACTAAACAAGATAAGGCCTTTTATATAACAAGTAATGGAACTATCTTCAATGATTATGTGGCTGTTAGTCAATCTCGAGAAGATGCTGTCAGAAGACTGAATTTTTTGTCTGGTGCTAAACATAAAATTCGTgcgaaatataaaaagaaatgttcCAAAATGAATGAAAACAAGTGCAAATGCAAAGATTGCGGTAAACAGTTTGAATTACCCTATTTCTTGAATCGGCATTTAATAAATTCTTCGGTACGCGCTTGCACATTGTGCGGGAAGGTtgtaatgaaagaaaaattgCCGGTACATTTGGAGAGGTCTCACCAGCATTTGGTCGAATTTTGTGATATTTGCTATAAGTTATTTGACAATAGACTTCTTTTGGATCGGCATAAACAGATATTGCATGCAGATAGCAGCTTGCAGTGTAATATCTGTAGAAACGGCTTCAAAAATGATCGATCCCTAAGAGCTCATATGTACACACATACCCTTTTTAACTGTTCTTCGTGCAACAGTAGTTTTGAAAACAGAAAATGTTACTTACACCATAGGAACAACTGTAAAGGATCCAAATGTACAAGTCAAGATATTTACGAATGTAACGACTGTGGGAGCAAATACACTAAAAAACCATCTTTAAGAGTACACATAGTCCAAAAACATTTAAACGTTCTACCATACATTTGCCAAATTTGTGGAAAACGTAGTTCTTCGAAGACTCACCACAAATCTCACGAATTGGTTCACAAGACTGAAAGAAAGATATATCAGTGCTACTGCGGCGCCAAAATGAGAACAGTCCACGGCTTTCAAATGCATCAGAGGATCCATTCTGGGGAGAAACCATATGAATGTCAGGAATGTGGGGACAGGTTTCTATCGGCTTCCAGAAGGTTGGATCATATAAAGAGGAAGCATAGACGGAAGGATCTTGGCTGCGATGAATGTGACGCAAGGTTTGTTAGACCTTCGGAGTTGAAAAGGCACTGGAGGACTGCCCATAATGTGCAAGAGGATCAATTGTTTCCACGAGGCTTGTGCGTGTCCTGCACCAGGGTAGCCGTGTCTGCTTCGGAATTCCGAGTTTTTGTAACGAAATCACAGCGATTGTGGTCCAATTGTATAGACTCCCTTCACACTCTTCCAACTCTGAATACTTCCCAAAAATCTCTATATGCAATCGTTAGAGAAAACCTACTGTTACAAACTGTCAATCATTTTGAAGGGAATGCGAAAGATTTGTTAGAACATCTAACTAATAGAATTGTTAAACGAAAGTCTTTATTAGTGGAACGGAAGCCTAGGCATCCTAGGACAGGACCAGCGTGCAGCTGCACAGATTGTGGCAAGAGCTTCCTTAGTCCATATTATCTAAATATGCATTTACGGAACAGTGGACAGAAGGAAGCTTGTTGGCTCTGTGGCGCCATGTTAACACGAGGGCAAGAAATGAAAGAGCATCTACGGAAAATACACAAAACCGAAATGTTTATTTGCTCAGAATGTCCATTGCTGTTTAAAACAGATGTGGACAGAAAGCGTCATGCTAAAAAGTGTCATGGGCCTGGTGTCATGACGTGCGCAGATTGTGGCAGAACATTCCAGAGGAGTGCATCTTTCGATGTGCATACACAAATGCACACAGTGCGTACATGTAGATCCTGTGGAGCACAGTTTACGAATCGTGGCTGTTACAGAGCGCACAGATCCAAGTGTGAACCTGATGCTAAACCGGATTTAAAGACAATACCAAGAAACAGACGTTCAAATATCCGCGACCCGGCAACTTTCACTTGTGATTATTGTGGCAAGACCTACCATTCGCGTCcgcaattaaaaaatcatatactaTGGATTCACATGGATATACGACCCCATCAGTGTCAGTGGTGTGGAAAAAGGTTTTATACGCCAGCCCGTTTGGCTGAACACTCAGTAGTACATACTAGAGTGAGGAATTTTGAATGTGATATCTGTGGTGCCAAGTTAGTGTCCAAAATGGCGGCTGTGTACCACAGGAGGCGGCACACAGGTGAAAGACCATACGAATGCCCAGATTGTGGAGAAAAGTTTATATCTTCATCTCGTAGAACGGAGCATGCCAAGCGAAGACATAATAAAGGTTCCCGTATCCATTGCCCGGAATGTCTGGCGAGTTTTGTGAGAAATcatgaattaaaaaaacatatggacAAAGTTCATAACAATGAAAATCATGTTGTTGTCAAAATAAAGAAGGAGAACGAAGAGTTTCATATGAAGGCTGTATGA
Protein Sequence: MTRQVDVKALVSHIVRGDGANKCRICLGDTTEGQVYLSDTVMMDGDKAVTLSEILETITGIKVVMEGDLPEGVCPECSRSAINAAEFKLLCHAAAQQWDTTIALLHDLPTQCTDNSTVFAIIDKNKMIAINDMKKSYNHTTAAHRLTKYLSKCPEPKKDGTYKCPNCDKCFSSPIKFSLHLKESPDLQRACYVCGTIVSQNILLSHLIKKHKEKPFSCKKCTAVFRSYNQYIHHVEKTHKFGRAFCGDCGRSFQSLNAYHAHVSIHVSKNCPSCDKLFRNHSCYMHHTKNCCELSSKKKVMKRKKKVIIEINNAKNNRKINVGLRGATYKECVCDYCGKTFARKKFICAHIQIVHMKNTHRPCIYCGKLLASAHMSEHIKQHKPDRTFTCEQCGIILKTKLGYNQHIRLHTGERPYECKQCGETFSASSRRSEHIRKVHKTKDIVLKQECHLCPAKFRLPYRLKNHLRSVHNDDQDQTPQFECAVCHEKFSSSRGLNHHSRKHQNVTSVVDETDFPAALCCVCAYNAISAWQFRHLCHESHNHWTKITEALMIPENPTKQDKAFYITSNGTIFNDYVAVSQSREDAVRRLNFLSGAKHKIRAKYKKKCSKMNENKCKCKDCGKQFELPYFLNRHLINSSVRACTLCGKVVMKEKLPVHLERSHQHLVEFCDICYKLFDNRLLLDRHKQILHADSSLQCNICRNGFKNDRSLRAHMYTHTLFNCSSCNSSFENRKCYLHHRNNCKGSKCTSQDIYECNDCGSKYTKKPSLRVHIVQKHLNVLPYICQICGKRSSSKTHHKSHELVHKTERKIYQCYCGAKMRTVHGFQMHQRIHSGEKPYECQECGDRFLSASRRLDHIKRKHRRKDLGCDECDARFVRPSELKRHWRTAHNVQEDQLFPRGLCVSCTRVAVSASEFRVFVTKSQRLWSNCIDSLHTLPTLNTSQKSLYAIVRENLLLQTVNHFEGNAKDLLEHLTNRIVKRKSLLVERKPRHPRTGPACSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMLTRGQEMKEHLRKIHKTEMFICSECPLLFKTDVDRKRHAKKCHGPGVMTCADCGRTFQRSASFDVHTQMHTVRTCRSCGAQFTNRGCYRAHRSKCEPDAKPDLKTIPRNRRSNIRDPATFTCDYCGKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECPDCGEKFISSSRRTEHAKRRHNKGSRIHCPECLASFVRNHELKKHMDKVHNNENHVVVKIKKENEEFHMKAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00781193;
90% Identity: iTF_00781193;
80% Identity: -