Basic Information

Insect: Heliconius hermathena
Gene Symbol: JARID2
Assembly: GCA_013403705.1
Location: JAAIXJ010000684.1:9321-21587[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.4e-15 6e-12 46.0 0.0 9 88 370 445 364 446 0.84

2 2 0.97 2.5e+03 -0.9 0.0 4 38 455 512 452 538 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.4e-15	6e-12	46.0	0.0	9	88	370	445	364	446	0.84
2	2	0.97	2.5e+03	-0.9	0.0	4	38	455	512	452	538	0.65

Sequence Information

Coding Sequence: atggCATTTGACGACATCTTAATTGATTCAAAATCCGATATATACATACAGGATGctgAATATACTCCCACCTGGAGGGCACCTCCCAACAGCAGCCCGGTACCATTCAAACAGATACCAGATCCATCGAATGaCGAGACACAACCTGGACCTAGCGGTCTACGATCACGATCACGATCAACATTGAGACGtgAATGGCCGAAATCTGAACCCAGTGATATATCTCCAATTGCAGGGACATCAATTGAtgATGGAGCTCAACCAGGGCCAAGTGGCACGCGTTCCAGCGCCCAGGGGTCCATTAAtgGTGGGGTTCAACCGGGCTCTAGCAGAAATCAAGGTCGTAAAGGCAAAGCTAAGGACAAGTCTAAATGCACACCACCACctgATACTGCCCAACCAGGACCCAGCGGTCTACAATCGCGATCCCACGCACAAAGTGatatagACTTGAATCAAAGTGGCCATAGGGCTCAATCTCCCGTCAATTCCGAATCATCATATgatgGTGGGATGTCCAGAGGAGAAGATCCGGAGTCTAGAAACAAGATGATACAAGTGTGGctggaaaatggaatatttaaagtTCCGACGGTGCCGAAAGCTAGGATGCCGCAAAATTCTTCACATGCCAGCATGGAGGAGGAGCGTCCGCGCAGACATCAGCAGTCCGGCGGTCGCCGTTCCAATACTCCTAGCCTGCGAGCGGTCTCGGAGCGTTCTATCAGCCCCATGTCCTTTATAACGACGCTCGATAACACCGAACCCGAGCAAGTCATCGACGCTGACGCCACCGAATTCACTGTACCCACCCGAAGGGATAGAATACAAATGTTGCCACCGAGACGCCAGAGGGGGAGGTTTGAACGCGCCAAACTGGCCGATGCGCCCATCTTCTGTCCCACCGAGGACGAATTTAAgGATCCCGTAACTTACTTTGAGAAAATAATGCCATGTGCAGCGAAATATGGACTATGTAAGGTGGTCGCACCGCCTGGGTTCAAACCACAGTGCAACTTAAACGATGCGATGCGCTTCACAGTATTCAATCAATATATAACAAGAGTATTCAGGCGATGGAGCTCTTTGACGAGGGAAATGTGTACCATGAGATCCCATCTGGCTACACTAAAGATAGCTTGCACACAACCGCCCTTGcttggCGGTATGGAAGTTAATTTGCCAAAACTATACGAATCTGTGAATAATAACGGCggcttaaaaaatatgaacaagaAAGCTTGGGCCAAAGTGGCTGAGGAGCTTAACTGTGGGAAATTGTCTCATCCAGATAGGAGACTGGACCAGTTGTATATGAAGTACGTGGTGCCGTACAACTCTCTTAGCAAAAggGAAAGGAAAGAGATGATAAGAAAGGTCGAGGAACTGTGGCAAAAAAGGCATAGGAGGATGCTCGACAGGGCATCAAACCCGTTACACACTCAAAAACACATGTTGGGAGAATCTGATTCATCTGATGATGACGAGGAATGTATCGTAAAAGGCCGTCCTATGGATCTCCTTACTTTCAAAAGGATCGCAAATAACGTTCAAAAGAGATATTTGCCCACCCGCGTTACAATAGATGAAATAGAGAACTCTTACTGGTCATCTGCTCTCATGGCGGAGCACCACGTGTGCGTACACAGCGCTTCCATAGAAACAAGCAGCGAGGGTTACGGCTTCACTAACAACTCGAATGAACCGTATGGCCAACATCCCTGGAATTTGAAGATGTTAAACCAAAACAATGGAAATATCCTCCGTTTACTCGGCTCTGTGGTCGGCCTGACCATCCCAACACTGCACCTGGGGATGCTCTACTCCACCAGCTGCTGGCACCGCGACCCCCATGGCTTACCGTGGATGGAGTACATGCACGAGGGGCCTCCGAAAATATGGTATGGAATACCAGACGAAGAAAGCGAGAGATTCCGTAAGGCGGTGGAAATATTATGCCCTACGTCGTGCCAAAATAAATCCATTTGGCTACCATCTGATATCACAATGATACCACCAAACTTTTTACTAGAACATTCCGTGTCCATGTCAAGGATGTTGCAAAATCCAGGGGAGTTTGTCATTGTGTTTCCCAAAGCGTACTCCTGTTCTATAGCCACTGGGTTTACTGTGTCTGAGAGTGTCTATTTTGCTTATAACCACTGGATAAATAACATCGGTCAAGTCTTTCAAGAGCTACGTGACAGCTGCGAGCCGTCCATGTTTTCTCTCGAGCATCTGTTGATCTCGGCGGCGACGGACCCGCGCGCGACACTCAACGTGCTGCAACTGGTGCACGCCAGCATGTCCAACATAGTGGGCACCGAGCTGGCTCACCGAGCGGCTCTCGTTAAACATGGCCTCAAGCCTCGCTTCGAAAAAAGGAACAACCCAACGGGCATTGTGTGGAATATTTCGGAGGAAGACGAGTGCGAAATATGTCGCgctaatttatatttgtctaGAGTAAACGGAGTTTTCGACAGAGATGGCGCTCTATGCGTCGGCCACGCCCTGCAGGTGCTAGACGAGCGTGTACGGAACATAAGGCGACGGAGCCAGTGTCACTACGAACTGGTCATTTACATGACGGAAACCGAACTTAAACAGATTGTTGAGAGGATCTCCAAAAGACTTGTGGACGTGAGGATGGCGCAGGCCTTCCCCCGCGttgtgtaa
Protein Sequence: MAFDDILIDSKSDIYIQDAEYTPTWRAPPNSSPVPFKQIPDPSNDETQPGPSGLRSRSRSTLRREWPKSEPSDISPIAGTSIDDGAQPGPSGTRSSAQGSINGGVQPGSSRNQGRKGKAKDKSKCTPPPDTAQPGPSGLQSRSHAQSDIDLNQSGHRAQSPVNSESSYDGGMSRGEDPESRNKMIQVWLENGIFKVPTVPKARMPQNSSHASMEEERPRRHQQSGGRRSNTPSLRAVSERSISPMSFITTLDNTEPEQVIDADATEFTVPTRRDRIQMLPPRRQRGRFERAKLADAPIFCPTEDEFKDPVTYFEKIMPCAAKYGLCKVVAPPGFKPQCNLNDAMRFTVFNQYITRVFRRWSSLTREMCTMRSHLATLKIACTQPPLLGGMEVNLPKLYESVNNNGGLKNMNKKAWAKVAEELNCGKLSHPDRRLDQLYMKYVVPYNSLSKRERKEMIRKVEELWQKRHRRMLDRASNPLHTQKHMLGESDSSDDDEECIVKGRPMDLLTFKRIANNVQKRYLPTRVTIDEIENSYWSSALMAEHHVCVHSASIETSSEGYGFTNNSNEPYGQHPWNLKMLNQNNGNILRLLGSVVGLTIPTLHLGMLYSTSCWHRDPHGLPWMEYMHEGPPKIWYGIPDEESERFRKAVEILCPTSCQNKSIWLPSDITMIPPNFLLEHSVSMSRMLQNPGEFVIVFPKAYSCSIATGFTVSESVYFAYNHWINNIGQVFQELRDSCEPSMFSLEHLLISAATDPRATLNVLQLVHASMSNIVGTELAHRAALVKHGLKPRFEKRNNPTGIVWNISEEDECEICRANLYLSRVNGVFDRDGALCVGHALQVLDERVRNIRRRSQCHYELVIYMTETELKQIVERISKRLVDVRMAQAFPRVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00775050;
90% Identity: -
80% Identity: -