Basic Information

Insect: Heliconius charithonia
Gene Symbol: -
Assembly: GCA_030704555.1
Location: CM060809.1:31866728-31873351[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0003 0.023 15.7 0.7 1 23 184 206 184 206 0.97

2 29 0.0015 0.11 13.5 0.6 2 20 234 252 233 254 0.92

3 29 2.9e-05 0.0022 18.9 0.2 3 23 281 302 279 302 0.96

4 29 3 2.3e+02 3.1 0.5 2 12 323 333 322 335 0.86

5 29 0.0097 0.75 10.9 1.4 1 23 353 375 353 375 0.97

6 29 0.0012 0.093 13.8 0.2 1 23 393 415 393 415 0.96

7 29 0.00035 0.027 15.4 3.0 2 23 455 476 454 476 0.96

8 29 0.0011 0.085 13.9 4.2 2 23 519 541 519 541 0.97

9 29 0.0028 0.21 12.6 1.1 1 23 591 614 591 614 0.94

10 29 0.0023 0.18 12.9 0.3 1 23 666 688 666 688 0.97

11 29 0.011 0.81 10.8 5.7 2 23 700 721 699 721 0.97

12 29 0.04 3.1 9.0 1.7 2 23 733 754 732 754 0.96

13 29 0.0022 0.17 13.0 0.7 1 23 764 786 764 786 0.98

14 29 0.0052 0.4 11.8 8.5 1 23 815 837 815 837 0.96

15 29 0.00098 0.076 14.0 2.5 1 23 848 870 848 870 0.96

16 29 0.00014 0.011 16.7 1.4 1 23 878 900 878 900 0.97

17 29 0.0039 0.3 12.2 0.1 2 23 920 942 919 942 0.97

18 29 0.068 5.3 8.2 4.6 1 23 989 1011 989 1011 0.98

19 29 0.015 1.2 10.3 0.8 2 23 1022 1044 1021 1044 0.95

20 29 0.0015 0.11 13.5 0.2 2 23 1067 1088 1066 1088 0.95

21 29 8.1 6.3e+02 1.7 5.9 2 23 1131 1153 1130 1153 0.94

22 29 0.015 1.2 10.3 0.3 2 23 1169 1190 1168 1190 0.94

23 29 3.7 2.8e+02 2.8 5.2 5 23 1200 1218 1198 1218 0.94

24 29 0.032 2.5 9.3 0.9 2 23 1229 1251 1228 1251 0.95

25 29 2.3 1.8e+02 3.4 6.2 2 23 1268 1286 1268 1286 0.88

26 29 0.13 10 7.4 1.1 2 21 1290 1309 1290 1310 0.93

27 29 1.1 85 4.4 1.1 2 23 1359 1380 1358 1380 0.93

28 29 0.0033 0.25 12.4 0.3 2 23 1391 1413 1390 1413 0.96

29 29 9.5 7.3e+02 1.5 3.7 2 21 1451 1470 1450 1471 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0003	0.023	15.7	0.7	1	23	184	206	184	206	0.97
2	29	0.0015	0.11	13.5	0.6	2	20	234	252	233	254	0.92
3	29	2.9e-05	0.0022	18.9	0.2	3	23	281	302	279	302	0.96
4	29	3	2.3e+02	3.1	0.5	2	12	323	333	322	335	0.86
5	29	0.0097	0.75	10.9	1.4	1	23	353	375	353	375	0.97
6	29	0.0012	0.093	13.8	0.2	1	23	393	415	393	415	0.96
7	29	0.00035	0.027	15.4	3.0	2	23	455	476	454	476	0.96
8	29	0.0011	0.085	13.9	4.2	2	23	519	541	519	541	0.97
9	29	0.0028	0.21	12.6	1.1	1	23	591	614	591	614	0.94
10	29	0.0023	0.18	12.9	0.3	1	23	666	688	666	688	0.97
11	29	0.011	0.81	10.8	5.7	2	23	700	721	699	721	0.97
12	29	0.04	3.1	9.0	1.7	2	23	733	754	732	754	0.96
13	29	0.0022	0.17	13.0	0.7	1	23	764	786	764	786	0.98
14	29	0.0052	0.4	11.8	8.5	1	23	815	837	815	837	0.96
15	29	0.00098	0.076	14.0	2.5	1	23	848	870	848	870	0.96
16	29	0.00014	0.011	16.7	1.4	1	23	878	900	878	900	0.97
17	29	0.0039	0.3	12.2	0.1	2	23	920	942	919	942	0.97
18	29	0.068	5.3	8.2	4.6	1	23	989	1011	989	1011	0.98
19	29	0.015	1.2	10.3	0.8	2	23	1022	1044	1021	1044	0.95
20	29	0.0015	0.11	13.5	0.2	2	23	1067	1088	1066	1088	0.95
21	29	8.1	6.3e+02	1.7	5.9	2	23	1131	1153	1130	1153	0.94
22	29	0.015	1.2	10.3	0.3	2	23	1169	1190	1168	1190	0.94
23	29	3.7	2.8e+02	2.8	5.2	5	23	1200	1218	1198	1218	0.94
24	29	0.032	2.5	9.3	0.9	2	23	1229	1251	1228	1251	0.95
25	29	2.3	1.8e+02	3.4	6.2	2	23	1268	1286	1268	1286	0.88
26	29	0.13	10	7.4	1.1	2	21	1290	1309	1290	1310	0.93
27	29	1.1	85	4.4	1.1	2	23	1359	1380	1358	1380	0.93
28	29	0.0033	0.25	12.4	0.3	2	23	1391	1413	1390	1413	0.96
29	29	9.5	7.3e+02	1.5	3.7	2	21	1451	1470	1450	1471	0.92

Sequence Information

Coding Sequence: ATGGCTCTCAAACTTGGAAAGTGTAggctttgcctcaaactcggcGATTTTTATTCCATCTTCACGGTGGACAACAACTTACAGCTCGCTGAAATGGTTATGGAATGTGCCCGAGTAAAGatatgtgAAGGTGATGGACTTCCAGATAAAATTTGTAGTGAATGTATCCAGAAACTCAGCAGTGCCCATATATTTAAACAGCAGTGTGAAAGATCTGATCAAGAACTGAGGCGAAACTATATTCCGCCTCCAGgcTTTACTGCATCTACTCCTACTAGACAAAGTAGTGAAGAACAATCAAAACCTTATCCGTCTTTTGAGGGTAAAGTCACACCTTTACCTAAGACACGTAAAAGAAGCAGGGATAGTTTAGACAATGTGTCAGTGGGCAGTCGAAATGAGTACCAACCAGGAAGCTCGAAACGTGTTGATGAATTACGTCTCTCACAGAAGAAAATAAGATTTTCCACAAATTCAGATTCTGAATTTGAAGACCACAATAGTGGATCGGTATATTCAGGAGGAACTGATTCTGATGAGCCATTGCTGCATAAGTGCGATGAATGTGGGAAAGCATTTAAATCTGCCCTTAGTGTGGTTGCTCACAAAAAGAGTCACAGACGAAGAAATGCCCAAAAACCTGTCCTAGTAGAACAACCTCAGGAGATCCAAGATGCTAATGACTCTGAGGATAAACTTAGTTGTGACAAATGTGGAAAAGAGTTTAAATTGAAGATAATGCTTAAACGCCACCACGAGATTTGTCCAAAATCACCCAGAAAGGAGCTTATGGTGTCGTTAGAACCGATTGACGCTGTCCAACAGTCTATCAAAATAGATTGTCCAATGTGCTCAACGAAATTTAAGACAATTGAAAATTTGGAAAAACACATGAAGGTAGTTCACGCGGCAGTTCTTAAAAAGGAAGATACGTCGATTAAGAACGAAAATGGAAAAGTTTGCGTTCCATGCTTCTATTGCGGGGAGACTTTCGAGGATTATTATATTCACAGTGCTCATTTCAACGTTTGTCCCCAAAAAACAGACACCATCACCTTCGAGTGTCCAGTTTGTAATAAAGTGATAACTAAAAAAGGTTGTTACTTCTTGCATTTAAAAGCACATTTTTTTCCTGTTAGCTCGAGTAAAACGACTCCAGAGCCTGTGAAAAATAGTTTTCAATGTCGTATGTGTAACAAGAAACTGCCGAGTCAAGATTCTTTAATTACACATCTAGCGGCTCATATGTCCAACATGGATGAAGCGGATGACGGCGGTGATGAAGAATCCAGAGCAAGTACAATGGAGGACTCGGCATCGATACATTCAGAATACAGTGCTAACATATCGAGTGGACcacttaaatgtaaattttgcgACAAATCCTTTAAATACAGAAAATCTCTATTGACCCATGAAATAAAACAcacagaagaaaatattaaaaaagaagtgCCAGACACTTCGACGGATCTGCTGAACGAAACCACGGCTAATGATAGATATAACAATTACGATTCTGAATCTAGTCAAGATGACGGCGAAGATGATAATACATGCGATATATGCGAGAAGCAGTTCTCCTACAAACGGTTGCTTTTGCATCACAAACGTACAAAACACAACATGACGTCTGGTACAAAAAGAGCCAAAATTAATCTAAAAGATTGTTCTGTACGCTGTCTCATATGCGACATAGAAATGAAAGTGAGTGCCATCAACGAACATAACCAGACTCATATAAGTGTGAATATAAAGCCGAGGAATCAATACACATGTATAGAATGCGGTCAGCAGTTCAAGAGTTGTAGTGCATTGGCcaatcatataaaatttgtacatCGTTTAAAACAACCGCCCATAACGGTTGCGTCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGTTGTCCAGAGTCACAACGGCTTAGAGGATTCCGCCGGTAATAGCACTCCCTTGGTCAATCTGAGTGGTTTTACTTGCACTATATGCAGTAAACAGTTGCCGACGCTAATATCGTTGAAGCGACATGTCAATTGGCACAACCATGTTGGCAAAAGTATGGAGAAAAAGCTGCAGTGTTTTGTTTGTCAAGAGAACTTCCGGTTTCAGTGTCACTACAAGGCGCACATGCGTGAACACTACAACGATACAAACCTCGATCCCAAATATCTGACTTGCTCGATCTGTAACAGGAAGAGCAAGCACCTGCGCGCCGCCCAGGCTCATATGAACTACCACAAGCAAACACGATTCCAGAACAAGGACTATGAGTGTTCCATATGCAAGAAAGTATTCCAGTACAGAAAAGTCTACCTTTCCCACATGGCTATCCATTATAAACGAGGCGAGAGTGTCAACAATACTATAGTTGGCTCCGAACTGCCTAATTCAGTGGACAAAGATAAATTTGACGGAACCCATACTTGTCACCATTGTGGAAAAGTATGTGATTCAGAAAACTCATTAAAGCATCACATAATTTGGCATAAATCTAAAACTTCGTTGTACGGTGCGAGGCATGCGTGCGATATATGCAATTTGCAGTTTACTAACAAAAGAAGGTTGGAATTACACACTCGGACGCATTTTGAAGATGATAATGGACCTTTTAAATGCCATATATGTGGAAAAGGTTACATTGTGGAAGATTACTTCAAAAGACACGTCAAAGGGCACAATTTTGATCATCAATCACATAAAAAGAGGATAGAGAAGTTAAGGAAGAATAAAGTGAAATGTCCGATTTGTGCGCGCTTTTATCCAGACGTGGTAAAGCTTATTCGCCATTTGCGTCGGACCCATCCTGAAAGTAAAATGATTAAAGAGGACCCGGACGCGCCGGCGCCTCGATATTATTCCTGCAAATTGTGCGCGAAAGTGTTCTTAGATGAAAAAAGATTGCAGTTCCATGAAGAGGCTCATCTGAGAAAGCCAGAATTCTTCAAATGCAAATTCTGTGGGAAAAAGACCATCTCCCTCAAAAACCATAGGGTGCACATAAAGAGTCATCTGACACAGAAATATATCGACGATCCATTGAAATGTCCTCAGTGTGAAGAGAAGTTTATGAGGGGCTACGATCTTCATTATCATTTAAGAGATGCTCACGGGATTAATGAAACATGGATAGCAGAGCGTGGAGTTCAAGCGCTGGACGGGCCTCTAAAGGAACTGCAGTGTTCCATTTGCTACAAAATATTAGCCACTAAAGGAAACTTCGAGAGACACATAGATTACCACAATTCGCTAAGATGCAACTATTGCTTCGATTACTTCAGCTCCTTACGCTTCCTCGAAGGGCATTTGGCGTTCAGCTGTGATAAAAAGAAACTCATTGGTGATACAGAAATACATCCAAGGAAAGTAAAGTGCCATATTTGTTATAAAGCATTCCATTTGCAAGTCAAACTAGACTGCCACTTGCGGACGCAACACggaataaaagtttttaaagaaGCTTCCGAAAGCAAAAAGGAACTAACGTGTGACTATTGCTTTAGAGTTTTTGAAAATGAGTACGCGTTAGGTAATCATAAGATCTACCACAGAACTATCGGGTACTTCGGTTGCATATACTGCAATAGGAAGTTTAATACAATGACGCTGTACAGAAAACATAAGAACCACCATTTTGCACAATTGAATGTAGATGAGCCGACAAAATGTGAACATTGTGACGAGAAGTTTGTAGCGTTCAGAGAAATGATCTACCACATGAGAGATGTTCATGGGGACGATAAAGAATGGGTGGTACTACCCAAAGAGTCGATTGAAGAAAAGTGTAACATCTGTCATAAAACCTTCTTCAATCTTCATAAGCATTTGGCTTACCACGAGGAGAACAGGTGTAAGAAATGTGGAGAATATTTCTATTCGCGTTTGGACCTCGATAATCATTTATGTGCGATAGAAAGTGATGAAGAAGTCACCGAATCTAATAATGACGGACTTCGACAAGTTTACGAGGAGTGTAGTTTCTGTTTCAAACCGGTCACTAAGAAGAATTCTAAAAAGAAACACGATCAAATCCATCGAGGTTCAGGGTCCATATCGTGTCGGTTTTGTTTCCTGAAGTTCAAAACAATGGACGCATTTAATATACACGCTTTCTCTCACAGAagtagaaaatataacaaaaagccTATCAAATGTCGTAAATGTGGGGAGCAATTTGTTAAATATGGTCCGTTCATTAAACATATGAAAATAGTGCACAAGTTGTCGAAAAAAATGCATTACAGAGCCACCGTCATGCCTGAGACGTGTGTTGTTTGCAATGACAACTTCCCCAATCTGCATAACCACTATCGAGctcatttacaaaatcagtGCCAGCAgtgctataaatatttcacctcgtTCAAAGTGTTCTCCCAACATCAATGTGATAGAGAAGACTTGGATCCAAGTAAAGTTTTCACATCAGACGCAAATTTACCTCAACTCATAAATACTTATGTACCAAAAGACGTGAAGGACGATGAGAAATATTACGGGCATGAAGAAACAGAAACTGAAGAAGAAAAAGTAGTTATAAGAGAAGAAAGAAATGATGTGAGTAAAGTGGAAATATTATCTCAAGACGAGGATAGTCAGAATTCAATTGATATAGACGAAGGGCAAGTACATGAAATGGTACACACGCCTATTATTTCTGATGTTCTTTCTCTATATAAGAAGAAAGATGATAAAGTTATTGATAACGATAGTCCAAGCGTGAGCGGCAATGTTGTAATTTTGACAGACGACGAAGATTCTATAGGCTTTAAGGATACTGCAAGTGTTATAACAATAGAAGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKICEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYIPPPGFTASTPTRQSSEEQSKPYPSFEGKVTPLPKTRKRSRDSLDNVSVGSRNEYQPGSSKRVDELRLSQKKIRFSTNSDSEFEDHNSGSVYSGGTDSDEPLLHKCDECGKAFKSALSVVAHKKSHRRRNAQKPVLVEQPQEIQDANDSEDKLSCDKCGKEFKLKIMLKRHHEICPKSPRKELMVSLEPIDAVQQSIKIDCPMCSTKFKTIENLEKHMKVVHAAVLKKEDTSIKNENGKVCVPCFYCGETFEDYYIHSAHFNVCPQKTDTITFECPVCNKVITKKGCYFLHLKAHFFPVSSSKTTPEPVKNSFQCRMCNKKLPSQDSLITHLAAHMSNMDEADDGGDEESRASTMEDSASIHSEYSANISSGPLKCKFCDKSFKYRKSLLTHEIKHTEENIKKEVPDTSTDLLNETTANDRYNNYDSESSQDDGEDDNTCDICEKQFSYKRLLLHHKRTKHNMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNQYTCIECGQQFKSCSALANHIKFVHRLKQPPITVASDLADFCEVVVTKAEPLDVVQSHNGLEDSAGNSTPLVNLSGFTCTICSKQLPTLISLKRHVNWHNHVGKSMEKKLQCFVCQENFRFQCHYKAHMREHYNDTNLDPKYLTCSICNRKSKHLRAAQAHMNYHKQTRFQNKDYECSICKKVFQYRKVYLSHMAIHYKRGESVNNTIVGSELPNSVDKDKFDGTHTCHHCGKVCDSENSLKHHIIWHKSKTSLYGARHACDICNLQFTNKRRLELHTRTHFEDDNGPFKCHICGKGYIVEDYFKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARFYPDVVKLIRHLRRTHPESKMIKEDPDAPAPRYYSCKLCAKVFLDEKRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKSHLTQKYIDDPLKCPQCEEKFMRGYDLHYHLRDAHGINETWIAERGVQALDGPLKELQCSICYKILATKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEIHPRKVKCHICYKAFHLQVKLDCHLRTQHGIKVFKEASESKKELTCDYCFRVFENEYALGNHKIYHRTIGYFGCIYCNRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDEKFVAFREMIYHMRDVHGDDKEWVVLPKESIEEKCNICHKTFFNLHKHLAYHEENRCKKCGEYFYSRLDLDNHLCAIESDEEVTESNNDGLRQVYEECSFCFKPVTKKNSKKKHDQIHRGSGSISCRFCFLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEQFVKYGPFIKHMKIVHKLSKKMHYRATVMPETCVVCNDNFPNLHNHYRAHLQNQCQQCYKYFTSFKVFSQHQCDREDLDPSKVFTSDANLPQLINTYVPKDVKDDEKYYGHEETETEEEKVVIREERNDVSKVEILSQDEDSQNSIDIDEGQVHEMVHTPIISDVLSLYKKKDDKVIDNDSPSVSGNVVILTDDEDSIGFKDTASVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00458245;
90% Identity: iTF_00780441;
80% Identity: -