Dvan002182.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000026.1:1672572-1679477[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0025 0.28 12.7 2.7 1 21 183 203 183 205 0.94 2 29 0.0013 0.14 13.7 0.2 2 21 234 253 233 254 0.93 3 29 1.2e-05 0.0014 20.0 0.2 3 23 281 302 279 302 0.96 4 29 9.6 1.1e+03 1.5 0.3 2 12 323 333 322 335 0.85 5 29 0.037 4.1 9.1 2.3 1 23 353 375 353 375 0.97 6 29 0.0012 0.13 13.8 0.2 1 23 393 415 393 415 0.96 7 29 3.6e-05 0.004 18.5 2.4 2 23 455 476 454 476 0.97 8 29 0.0011 0.12 13.9 4.2 2 23 517 539 517 539 0.97 9 29 0.011 1.3 10.7 1.5 5 23 568 587 559 587 0.85 10 29 0.006 0.67 11.5 0.2 1 23 639 661 639 661 0.97 11 29 0.01 1.1 10.8 5.7 2 23 673 694 672 694 0.97 12 29 0.01 1.1 10.8 1.0 2 23 706 727 705 727 0.96 13 29 0.004 0.45 12.1 0.8 1 23 737 759 737 759 0.97 14 29 0.005 0.55 11.8 8.5 1 23 788 810 788 810 0.96 15 29 0.00042 0.046 15.2 3.0 1 23 821 843 821 843 0.98 16 29 0.00018 0.02 16.3 1.3 1 23 851 873 851 873 0.97 17 29 0.0037 0.41 12.2 0.1 2 23 893 915 892 915 0.97 18 29 0.066 7.3 8.3 4.6 1 23 962 984 962 984 0.98 19 29 0.056 6.2 8.5 3.0 2 23 995 1017 994 1017 0.95 20 29 0.00052 0.058 14.9 0.2 2 23 1040 1061 1039 1061 0.95 21 29 2.6 2.9e+02 3.2 6.2 2 23 1104 1126 1103 1126 0.97 22 29 0.0036 0.4 12.2 0.5 2 23 1142 1163 1141 1163 0.95 23 29 5.1 5.7e+02 2.3 7.8 5 23 1173 1191 1171 1191 0.94 24 29 0.031 3.4 9.3 0.9 2 23 1202 1224 1201 1224 0.95 25 29 0.9 1e+02 4.7 3.9 2 23 1241 1259 1241 1259 0.88 26 29 0.12 14 7.4 1.1 2 21 1263 1282 1263 1283 0.93 27 29 0.45 50 5.6 0.9 2 23 1332 1353 1331 1353 0.93 28 29 0.0045 0.5 11.9 0.3 2 23 1364 1386 1363 1386 0.96 29 29 9.5 1.1e+03 1.5 3.3 2 21 1424 1443 1423 1444 0.92
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTTGGAAAGTGTAGGCTTTGCCTCAAACTCGGCGACTTTTATTCCATCTTCACGATGGACAACAACTTGCAACTCGCTGAAATGGTTATGGAATGCGCTCGTGTAAAGATATGTGAAGGTGATGGACTTCCTGACAAGATTTGTAGTGAGTGTGTTCAGAAGCTTAGTAGTGCTCATATATTTAAGCAACAATGTGAACGATCTGATCAAGAACTGCGACGAAACTATATTCCACCTCCAGGCTTTAGCGCTTCCACACCAACTAGGCAAAGTAGTGAAGAACAATCCAAACCATCGCCATCTTTTGAAAGTAAAGTCACACCTCTAACCAGAACACGTAAAAGAAGTAGGGATAGTATTGACAATATCTCTTTGGGTAGTCGTAATGATTATCAACCGGGAAGTTCTAAGCGAGTCGATGAATTACGTCTGTCTCAAAAGAAGCCAAGATTTGCCACAAATTCCGATTCGGATTACGAAGACCACAGTGGATCATTTTATTCTGCTGAAACTGATTCGGACGAGCCGTTGCAACACAAGTGCGTTGAATGTGGTAAAGCATTTAAAACGGCCATCAGTATGACAGCGCATAGGAAATGTCACAAGCGGAGAGGCGCAAAGCCGGTGGCCGGTCTAGTGGTACCGCCCAAGGAAATTCAAGACGCCAACGATTCAGACGATAAGCTTAGCTGTGACAAATGTGGAAGAGAATTCAAATTGAAGATAATGCTCAAACGCCATCAAGAGGTTTGCGCCAAATCTCCAAGAAAGGAGTTAATGGTGTCGCTGGAACCCATCGATGCGGTCCAACAGCTCGTGAAAATAGATTGCCCCATGTGCTCGACTAAGTTTAAGACGATTGAAAATTTGGAGAAACACATGAGGGTTGTTCACGCGGCAGTTCTCAAGAAGGAGGATACGCCTATGAAGGTCGAAAATGGGAAAGTTTGCGTGCCATGCTTTTATTGTGGGCAGATTTTCGATGATTATTACATCCACAGCGCTCATTTTAACGTGTGTCCGCAAAAAACGGATACCGTCACTTTTGAATGTACGGTCTGCAATAAAGTTATTACTAAAAAGGGATGCTATTTCCTACACCTTAAGGCTCATTTTTTTCCCCTAATCTCTAGTAAAGCGCCGCCAGATcttgttaaaagtaattttcaatGTCGCATGTGCAATAAGAAATTGCCGAGTCAGGATTCGTTGATTACGCACCTTGCGGCACATATGTCCAACATGGACGAGGCGGATGATGGCGGTGATGAAGAATCCAGggcGAGTACAATGGAGGACTCTGCATCAATTCATTCAGAGTACAGCGGCAACGTGTCGAGTGGTCCGCTCAAGTGTAAAATATGTGACAAATCATTTAAATACAGGAAATCTCTACTATCCCACGAAATGAAACACAcagaagataatattaaaagagaAGTGCCAGACACTTCGTCGGAACTGCTCAACGAAACAAATGATACTTACAACCAATATGACTCTGAGTCTAGCCAAGATGACGGCGAAGATGATAACACGTGTGACATTTGTGAAAAGCAGTTCTCCTACAAACGTTTACTCTTGCACCACAAAAGAACGAAACACAACATGACTTCCGGCACAAAAAGAGCCAAAATCAACCTCAAAGATTGCTCTGTACGCTGTCTCATATGCGATATAGAAATGAAAAAGTGCGGGCAGCAGTTTAAAAGCTGTAGCGCCTTAGCCAACCATATAAAGTTCGTGCATCGTTTAAAACAGCCACCTATAACGGTTGCTTCGGATTTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACTTTGTTCAGAGTCACAACGGCTATGTGGATTCCGCCGGAAATGGCACGCCATTGGTCAATTTGAGTGGGTTTACGTGTACTGTATGTAGTAAGCAGTTGCCGACGTTGATAGCTTTGAAGCGACACGTCAACTGGCACAACCATGTTGGCAAAAGTATGGAGAAACAGCTGCAGTGTTTTGTTTGTCAGGAGAATTTCCGATTTCAATGTCACTACAAGGCGCACATGCGCGAACACTACAACGATACAAACCTCGATCCTAAATATCTGACTTGTCCTATATGCAACAGAAAAAGTAAGCATTTACGCGCGGCTCAGGCCCATATGAACTATCACAAGCAAACTCGCTTCCAAAATAAAGACTACGAATGCTCTATTTGCAAGAAAGTGTTCCAGTTCAGAAAAGTATATTTGTCCCACATGGCGATACATTATAAACGGGGCGAGAGTGTCAATAACACTATAGTTGGATCTGTGCTTCCTAATTCGGTGGATAAAGAGAAATTCGATGGTTCCCACACTTGTCACCATTGCGGGAAAGTTTGTGATTCAGAAAATTCGCTAAAACACCATATAATTTGGCATAAATCCAAGACTTCGTTGTACGGAGCGCGGCACGAGTGTGATATATGCAACTTACAGTTTACTAACAAGAAACGACTCGAGCTACACACGCGTACACACTTCGAAGACGATAATGGACCTTTTAAATGTCACATTTGCGGCAAAGGCTACATTGTGGAAGATTACTACAAGAGACACGTGAAAGGTCACAACTTTGATCACCAGTCGCATAAGAAGAGGATAGAGAAGTTGAGGAAGAATAAAGTGAAGTGCCCAATCTGTGCTCGCTTCTATCCGGATGTGGTTAAACTTATCCGCCATTTGCGTCGCACCCATCCGGAGAGTAAAATGATCAAAGAAGATCCGGACGCGCCGGCCCAGAGATATTTCTCCTGCAAGTTGTGTGCCAAAGTGTTCTTAGATGAGAGACGATTGCAATTCCACGAAGAAGCCCATCTGAGGAAGCCCGAATTCTTTAAATGCAAGTTCTGCGGCAAAAAGACCATTTCGTTAAAGAACCACAGAGTGCATATAAAAAGTCATCTGACCCAGAAATATATTGACGATCCGCTGAAATGTTCTCATTGTGAAGAGAAATTCATGAGGGGTTACGATCTTCATTACCATCTGAGAGATGTACACGGGATAAATGAAACGTGGATAGCTGAGCGCGGCGTGCAGACGTTAGACGGGCCGTTGAAAGAACTACAATGTTCTATTTGCTACAAAGTGTTGGCCAACAAAGGAAACTTCGAGAGACACATAGACTATCACAACTCCCTGAGATGCAACTACTGTTTCGACTACTTCAGCTCCTTGCGCTTCCTCGAAGGCCATTTGGCGTTTAGCTGTAATAAGAAGAAACTGATTGGTGATACAGAAATATATCCGAGAAAAGTAAAGTGCCATATTTGCTACAAGGCGTTCCATTTGCAAGTGAAATTGGACTGTCACATGCGCACGCAACACGGGATTAAAGTGTTCAAGGAAGCTTCCGAAAGCAAAAAGGAGCTGACGTGCGATTATTGTTTTAGAGTTTTCGAGAACGAGTACGCGTTAAGTAACCACAAGATATATCACCGTACTGTCGGTTATTTCGGCTGCATTTACTGCAATAGGAAGTTTAATACGATGACGCATTATAGAAAGCACAAAAATCACCATTTCTCACAATTGAACGTAGATGAACCTACCAAGTGTGAACACTGTGACGAGAAGTTCGTCGCGTTTAGGGAAATGATCTACCACATGAGAGACGTGCACGGCGATGATAAAGAGTGGGTGGTTCTACCCAAAGAGTCGATCGAAGAGAAGTGTCAAATCTGCAACAAAACCTTCTTCAATCTTCACAAACATTTGGCTTACCACGAGGAGAATAGATGCAAGAAATGTGGAGAGTATTTCTATTCGCGTTTGGACCTCGATAATCATTTGTGTGCGATCGACAGCGATGAAGAAGTCGCCGAGTCCAATAATGAGGGGCTTAGGCAAGTTTATGAGGAGTGCAGTTTCTGTTTCAAGCCGGTTACCAAGAAGAATTCTAAGAGAAAACACGATCAAATCCACCGAGGGTCAGGCTCCATATCGTGTAGATTTTGCTCCCTCAAATTCAAAACAATGGACGCTTTCAATATCCACGCGTTCTCTCACAGAAGtcggaaatataataaaaagccgATTAAATGTCGTAAGTGTGGCGAACAGTTCGTGAAGTACGGGCCGTTTATTAGGCATATGAAGCTGGTGCACAAGTCGTCACAAAAAATGCATTACAGAGCCACTGTGATGCCGGAACAGTGTGTTGTGTGCAAAGACAACTTTCCAAACTTACACAATCACTATAGAGCTCATCTACAAAATCAATGCCAGCTGtgctacaaatattttacttcgtTCAAAGTGTTTTCACAACATCAATGTGATAAAGAGGACACGGAACCAAATAAAGTTTTTGTATCGGATGCAAATTTACCACTGCTAATAAATACTTATGTACCGAAAGATGAGAAGGACGATGAGAAATATTACGGGCATGAAGAAGAAGGCGAAGAACAAATAGTATATCCAGATATAAAGAAATGTGATGTTACTAAAGCGGAGATTGTATCTCAAGATGAAGATAGTCAAAATTCTATTGACATAGATGAAGGGCAGGTGCATGAAATGGCCCACACACCGATTATTTCTGATGTACTATCATTGTATAAGAAGAAAGATGACAAAACTAATGAAGATCGTCCGAGTGTGAATGGCAATGTGGTGATTTTGACAGATGACGAGGATTCCATGGATTTTAATGATAAGAATACAAATGTAATAACTATAGAGGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKICEGDGLPDKICSECVQKLSSAHIFKQQCERSDQELRRNYIPPPGFSASTPTRQSSEEQSKPSPSFESKVTPLTRTRKRSRDSIDNISLGSRNDYQPGSSKRVDELRLSQKKPRFATNSDSDYEDHSGSFYSAETDSDEPLQHKCVECGKAFKTAISMTAHRKCHKRRGAKPVAGLVVPPKEIQDANDSDDKLSCDKCGREFKLKIMLKRHQEVCAKSPRKELMVSLEPIDAVQQLVKIDCPMCSTKFKTIENLEKHMRVVHAAVLKKEDTPMKVENGKVCVPCFYCGQIFDDYYIHSAHFNVCPQKTDTVTFECTVCNKVITKKGCYFLHLKAHFFPLISSKAPPDLVKSNFQCRMCNKKLPSQDSLITHLAAHMSNMDEADDGGDEESRASTMEDSASIHSEYSGNVSSGPLKCKICDKSFKYRKSLLSHEMKHTEDNIKREVPDTSSELLNETNDTYNQYDSESSQDDGEDDNTCDICEKQFSYKRLLLHHKRTKHNMTSGTKRAKINLKDCSVRCLICDIEMKKCGQQFKSCSALANHIKFVHRLKQPPITVASDLADFCEVVVTKAEPLDFVQSHNGYVDSAGNGTPLVNLSGFTCTVCSKQLPTLIALKRHVNWHNHVGKSMEKQLQCFVCQENFRFQCHYKAHMREHYNDTNLDPKYLTCPICNRKSKHLRAAQAHMNYHKQTRFQNKDYECSICKKVFQFRKVYLSHMAIHYKRGESVNNTIVGSVLPNSVDKEKFDGSHTCHHCGKVCDSENSLKHHIIWHKSKTSLYGARHECDICNLQFTNKKRLELHTRTHFEDDNGPFKCHICGKGYIVEDYYKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARFYPDVVKLIRHLRRTHPESKMIKEDPDAPAQRYFSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKSHLTQKYIDDPLKCSHCEEKFMRGYDLHYHLRDVHGINETWIAERGVQTLDGPLKELQCSICYKVLANKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCNKKKLIGDTEIYPRKVKCHICYKAFHLQVKLDCHMRTQHGIKVFKEASESKKELTCDYCFRVFENEYALSNHKIYHRTVGYFGCIYCNRKFNTMTHYRKHKNHHFSQLNVDEPTKCEHCDEKFVAFREMIYHMRDVHGDDKEWVVLPKESIEEKCQICNKTFFNLHKHLAYHEENRCKKCGEYFYSRLDLDNHLCAIDSDEEVAESNNEGLRQVYEECSFCFKPVTKKNSKRKHDQIHRGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEQFVKYGPFIRHMKLVHKSSQKMHYRATVMPEQCVVCKDNFPNLHNHYRAHLQNQCQLCYKYFTSFKVFSQHQCDKEDTEPNKVFVSDANLPLLINTYVPKDEKDDEKYYGHEEEGEEQIVYPDIKKCDVTKAEIVSQDEDSQNSIDIDEGQVHEMAHTPIISDVLSLYKKKDDKTNEDRPSVNGNVVILTDDEDSMDFNDKNTNVITIED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00775445; iTF_00776182; iTF_00778912; iTF_00621408;
- 90% Identity
- iTF_00457403;
- 80% Identity
- -