Hcha007479.1
Basic Information
- Insect
- Heliconius charithonia
- Gene Symbol
- dsx
- Assembly
- GCA_030704555.1
- Location
- CM060816.1:7770299-7770985[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 1.4e+04 -3.4 0.3 8 15 4 11 3 15 0.51 2 2 6.4e-24 2.8e-20 72.5 11.8 2 47 91 136 90 136 0.97
Sequence Information
- Coding Sequence
- ATGCATACTTGCAACGTGCACAGCAATAAATGCAGCGCGCGGGGCGTGCGGGGCGTGCGGGCGGCGCGGGTGGCGGCGGGGCGGGGCAGTGCAGCCGGCGGCCGGCGGAGGGGCATCAGTCGCATCGTGACCGCGCGTCGCGCTGCGTGTGCGTCGCTGCGTCTGTCCTGCGCCGCCATGGTCTCCGTGGGCTCGTGGAGGCGCCGCACGCCCGACGACTGCGAGGAGCGCTCCGACCCCGGCGCCTCCAGCTCGGCCGTGCCGCGTGCGCCGCCCAACTGCGCGCGCTGTCGCAACCACCGCCTCAAGGTAGAGCTCAAGGGCCACAAGCGGTACTGCAAGTACCGGTACTGCACCTGCGAGAAGTGCCGCCTGACCGCTGACAGGCAACGGGTCATGGCGTTACAGACGGCTCTGAGACGGGCCCAGGCGCAGGACGAGGCCCGCGCCCGCGCTATCGAGTCCGGCTCCCAGCCCCCCGGACTGGAGCTGGACCGCCCCGACCCGCCGCTGGTGAAGGCACCCCGGAGCCCCGTGATCCCGCCGGCGCCCTCGCGCTCCCTGGGCTCGCCCAGCTGCGACTCCGTCCCGGGCTCGCCGGGGGTGTCGCCGtacgcgccgccgccgccgtcgGCGCCCCCGCAGCCGGCCATGCCGCCCCTGCTGCCGCCGCAACAGCCCGGTTAG
- Protein Sequence
- MHTCNVHSNKCSARGVRGVRAARVAAGRGSAAGGRRRGISRIVTARRAACASLRLSCAAMVSVGSWRRRTPDDCEERSDPGASSSAVPRAPPNCARCRNHRLKVELKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEARARAIESGSQPPGLELDRPDPPLVKAPRSPVIPPAPSRSLGSPSCDSVPGSPGVSPYAPPPPSAPPQPAMPPLLPPQQPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00780293;
- 90% Identity
- iTF_00782688;
- 80% Identity
- -