Hcha000681.2
Basic Information
- Insect
- Heliconius charithonia
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030704555.1
- Location
- CM060809.1:9379822-9382833[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.26 6.9e+03 -2.8 4.7 61 102 54 96 10 124 0.44 2 5 0.75 2e+04 -4.2 0.2 89 102 204 217 192 235 0.44 3 5 4.1e-101 1.1e-96 323.5 7.0 3 218 256 463 254 463 0.93 4 5 0.31 8.2e+03 -3.0 0.3 78 103 483 508 464 567 0.60 5 5 0.19 4.9e+03 -2.3 1.5 37 69 671 692 610 755 0.55
Sequence Information
- Coding Sequence
- ATGAAGAAGACGCCCCGACGCGCGCTACATCGCGTGTTAGCCTCCTTCTCAGTTTTGCCGTATTCTATCTTGCCTGCGTCGCTCAAGAGTCGTCGTACACGATTACGCGAGATACGGCGAaaAGCACTGGACAAGAAAACTAGAGAAATTACGGAAAAATCTGAAGATCGACCAAATTCACATAGGAATTTAGTGGTGCTCACAATGGAGCAAGTAGATGATAAGGAACATCTACCTGTGATAAAGGATGAAAAAGCAAACGACAGCGATGCTCACAGTGAAGATCTTAATTCTAATGATgaacaaaataatgttaatagcTCTCCGTTTTATGAGAGCAGTGATAGTAAAATAGAATATGCTATTAAGTTAGACGACAATGACACCTTAAGTGACATAGATGACATAAAAACAGACACAGCATCAGCAGACAGTGAAGACTCTGCTCTTGGCAGTCTGCCGCCTGACAGTACCCTTCTCGATAGAGAAGAAGATGCTCAAGATCGATCTGATGGCAGTGACTCAGGGCTTGGCTCAGAGACACCAGATGATACAAAGGTACCCAGTTTTAATTTGCAACTACCTTGTGAAAATGATGAAAGCAGTACACAATCAGCATGTGAAGAAAACAATTCAAGTTCTTCTGATAGTAATGACCATATTGGTAATGACAATACTGtggaagtaataaataaacccCTTAAAAGCAGCCTTAAAAGAAAATGTGATGATGAAATAATTGAAGAACCCCAACAAAAGAGAATTAAACACAATATACAATTTGATAATGTTACAGTTTTCTATTTCCCAAGATCTCAAGGTTTTTCTTGTGTTCCATCTCAAGGAGGCTCAACATTAGGTATGGAATGGACTCACAGTCACACCCAGAAATTCACTCTTGCTGAGCATGCCCTAGAACAGCGACGATTACACAGACAAGTTCTACAACAATTAAAAAGTGAGAGGCACACATTACAAGGTGTATCTCTTTCATCAAGTGAAGATAGTGATACAGAAGAAGAGACAAGTGACATATCTGAATCAGAGCTGGATTTGGACAGTTATTACTTTTTACAACCAGTACCAACTAGGCAGAGAAGAGCTTTATTAAGAGCAGCAGGTGTGAGAAAAATTGAAGGCTATGAAAAAGATGAATGTAGAGACATAAGAACTTCACGTGAATTTTGTGGATGTGCATGTAAAGGTGTCTGTAACCCCGCTAATTGCTCGTGTAGTTTGGGTGGCATTAAATGCCAAGTTGATAGATTAAACTTTCCATGTGGATGTACgagagatggatgtggaaataCTACTGGCAGAATAGAGTTTAACCCTATGAGAGTTCGAACTCACTTTATTAATACCCTTATGAGGGTAGGTcttgaaaagaaaaatgaagAGGCTCAAGAAGCTGTTAAAAGAAAATGGGCAGAAGCACATAGTGTCAACGCCCAATGTGGCACTAGTacttttgaaaaagaaaatcacCTTAACCGTGAGGACATATCTTTATCTAATATGAATATGCCTCACAGGCTTGGTATGGAATCTTGTATAAACACAAATTTTACCAATATACATCACAATTTAAGCAATCCCGGTACTAATCAAAGTGACACATTTAGTTTTAGAAATGAATCTCTAGACCAcagaaatctaaaaaataacatGCTAAACTTCGAAGATAAATCTGATCACCGCAATCACGACCCTTACACATCAAACATATTACAAGGCAAAGGACCTCCTTATGCCACCACAAATACTATGGAATTCAACACAATGACAAACAATATACAACGATACCAATGTGATCTCAACTATTCTTATGATCAGCACTCAGACCATCATTTCAAGGGTCTGCAGAGTTTTTCAGCAGCTAGTTTTGAAGAGTTCGCCCATAACTCTCAGATGTCGATGCTCAACCATTACGGCCACATGTACATGTCAGATTACATGCAAAAGCCGAGCACTTGTGTTCCCGAACACAATTCAATGCAATATCAATCAATGTCTCataatcattataatatgtataaaaacacAGAATGCATCACAGAAAACAAAACAGAAACACATTATACCACATTGATGACAATGCCATATCAACAAAGCAATAAATTGCAAGCTGTAGATAACGACGAGAATTGGTTTAGTCATAATACACTTTTAAATTTGGACCATTCAGTTCAAGTCACGCAAGAAGCAGCTGTAGTTCAGTCGGAACCTGCCCAAGTAGCGGCGGAAAGTGACAATTGTGAAACGACTGAAAACTTTGgtgaacttattaaaaaaactatggtAGAGTCTGTTACGGTGtag
- Protein Sequence
- MKKTPRRALHRVLASFSVLPYSILPASLKSRRTRLREIRRKALDKKTREITEKSEDRPNSHRNLVVLTMEQVDDKEHLPVIKDEKANDSDAHSEDLNSNDEQNNVNSSPFYESSDSKIEYAIKLDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSTLLDREEDAQDRSDGSDSGLGSETPDDTKVPSFNLQLPCENDESSTQSACEENNSSSSDSNDHIGNDNTVEVINKPLKSSLKRKCDDEIIEEPQQKRIKHNIQFDNVTVFYFPRSQGFSCVPSQGGSTLGMEWTHSHTQKFTLAEHALEQRRLHRQVLQQLKSERHTLQGVSLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPANCSCSLGGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPMRVRTHFINTLMRVGLEKKNEEAQEAVKRKWAEAHSVNAQCGTSTFEKENHLNREDISLSNMNMPHRLGMESCINTNFTNIHHNLSNPGTNQSDTFSFRNESLDHRNLKNNMLNFEDKSDHRNHDPYTSNILQGKGPPYATTNTMEFNTMTNNIQRYQCDLNYSYDQHSDHHFKGLQSFSAASFEEFAHNSQMSMLNHYGHMYMSDYMQKPSTCVPEHNSMQYQSMSHNHYNMYKNTECITENKTETHYTTLMTMPYQQSNKLQAVDNDENWFSHNTLLNLDHSVQVTQEAAVVQSEPAQVAAESDNCETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00780261; iTF_00781034; iTF_00777387; iTF_00781838; iTF_00776728; iTF_00779512; iTF_00778016; iTF_00774498; iTF_01181899; iTF_00457242; iTF_00776026; iTF_00778762; iTF_00621243; iTF_00621244; iTF_00782651; iTF_00247203; iTF_00723076; iTF_00248093; iTF_00159851; iTF_00213457; iTF_00212478; iTF_00458060;
- 90% Identity
- iTF_00776026;
- 80% Identity
- -