Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_905404265.1
Location
FR989986.1:5720282-5722480[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.23 6.2e+03 -2.6 1.1 80 80 61 61 8 116 0.49
2 3 0.18 4.6e+03 -2.2 0.4 85 108 157 181 139 205 0.42
3 3 1.2e-101 3.2e-97 325.3 7.0 3 218 211 418 209 418 0.93

Sequence Information

Coding Sequence
ATGGACAAACAGCCTGTAGAATCAACTGAAATATCAGACAGTCAACAAAATTCACATAGCAATATAGAGGTGCCCACAATGGAGCAAATAGAGGATAAGGAATGTGTACCTGTGATAAAGGATGAAAAAGCTAGTGACAGTGAAGATCTTAACTTTAATGATGAACAAAATAATGTAAACAGTTCTCCGTTTTATGAGAGCAGTGATAGTAAAATAGAATATGCTGTTAAGTTAGAAGATAATGACACCTTAAGTGACATAGAAGATATTAAAACAGATACTGCATCAGCTGATAGTGAGGATTCAGCTCTTGGGAGTCTCCCACCAGACAGTACACTTAATGATAGAGAAGAAGATGCTCAAGACCGGTCTGATGGCAGTGACTCAGGAATCGGTTCAGAAACACCTGATGATTCTAAAGTTCCAAGTTTTAACCTTCAATTACCTTGTACTAATGAGGAAAACAATAAACAAATAGAATCTGAAGAAAACAATGCAAGATCACTTTCAAACAGTAATGATGAGTTTAGTGCAGATAACAATACCACTGTAATAGATAAACCCCTGCGAAGCAGCCTCAAAAGAAAAAATGATGATGCAACAATTGATGAACCCCATCAAAAAAGAATAAAACACAGTATACAGTTTGATAATGTTACAGTTTTCTACTTTCCGAGAGCTCAAGGTTTTTCTTGTGTACCTTCTCAAGGAGGTTCTACATTAGGTATGGAGTGGGAACATAGTCACATACAGAAGTTCACTCTAGCAGAACATGCACTGGAACAGAGGAGATTACATAGACAAGTTTTACAACAATTAAAAAGTGAACGACATACTTTACAAGGTGTATCACTTTCATCCAGTGAAGATAGTGACACTGAGGAGGAAACAAGTGACATATCTGAATCCGAGTTAGATTTAGACAGCTATTACTTTCTACAACCAGTACCAACAAGGCAAAGAAGAGCTCTATTAAGAGCTGCTGGTGTTCGAAAAATTGAAGGCTATGAGAAAGATGAATGTAGAGACATTAGGACATCTCGTGAATTTTGTGGCTGTGCCTGTAAAGGTGTCTGTAATCCCAATAATTGCTCCTGTAGTATGGGTGGCATTAAATGCCAAGTTGATAGATTAAACTTTCCATGTGGATGCACAAGAGATGGATGTGGCAATACTTCTGGGAGGATAGAGTTTAACCCTATGAGAGTAAGGACTCACTTTATTAATACCCTTATGAGGATAGGTCTTGAGAAGAAAACTGAGGAAGCTCAAGAAGCTGTTAAAAGAAAATGGGCAGAAGCACATGGTGTCAATACCCAATGTACCCCTATTACCTATGAAAAAGAAAACCATCATAGCCATGAAGAAACCACTGCATCCAATATGAACATGCCACACCGGCTTGGCATGGAATCTTGTATAAACACAGCTAGTTTTAATAATATACATCACAATTTAAACAATCCTAGTAGTAATCAAAATGAAACATTTAGTTTTAGAAATGAAACACTTGACCATAGAAACTTAAAAAATAATATGTTGAGCTTTGAAGATAAATCTGATCACCGCAATCATGATCCTTACACATCTAACATATTGCAAGGGAAAGGGCCTCCTTATTCCAATGCCAATACAATGGAATTCAACACAATGACAAATAATATGCAAAGGTACCCATGTGATCTCAATTACACATATGAACCAACCAACCAACACTCAGACCACCATTTTAAGGGTTTCCAAAGTTTTTCAGCAGCTAGTTTTGAAGAATTTGCCCATAACTCACAAATGTCTGTGCTCAATCACTATGGTCACATGTACATGACGGATTATATGCAAAAGCCAAGTACAAGTATGACTGAACACAATTTAATGCAGTATCCGTCAATGTTACATACCCATTATATGTATAAAAATACATCTGAGTGTGCTACAGAAAACAAAACAGATGCACATTATACAAGTTTGATGACAATGCCATATCAACAAAGCAATAAATTGCAAGCTATAGATAATGATGAAAATTGGTTTAGTCATAATACACTATTAAACTTAGATCACTCTGTTCAGGTTACACAAGAAGCTCCTGTTGTGCAGCCAGAACCAGGCCCGATCATGGCTGAAAGTGAAAATTGTGACACTACCGAAAACTTTGGTGAACTTATTAAAAAAACTATGGTAGAATCTGTTACAGTGTAG
Protein Sequence
MDKQPVESTEISDSQQNSHSNIEVPTMEQIEDKECVPVIKDEKASDSEDLNFNDEQNNVNSSPFYESSDSKIEYAVKLEDNDTLSDIEDIKTDTASADSEDSALGSLPPDSTLNDREEDAQDRSDGSDSGIGSETPDDSKVPSFNLQLPCTNEENNKQIESEENNARSLSNSNDEFSADNNTTVIDKPLRSSLKRKNDDATIDEPHQKRIKHSIQFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHSHIQKFTLAEHALEQRRLHRQVLQQLKSERHTLQGVSLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPNNCSCSMGGIKCQVDRLNFPCGCTRDGCGNTSGRIEFNPMRVRTHFINTLMRIGLEKKTEEAQEAVKRKWAEAHGVNTQCTPITYEKENHHSHEETTASNMNMPHRLGMESCINTASFNNIHHNLNNPSSNQNETFSFRNETLDHRNLKNNMLSFEDKSDHRNHDPYTSNILQGKGPPYSNANTMEFNTMTNNMQRYPCDLNYTYEPTNQHSDHHFKGFQSFSAASFEEFAHNSQMSVLNHYGHMYMTDYMQKPSTSMTEHNLMQYPSMLHTHYMYKNTSECATENKTDAHYTSLMTMPYQQSNKLQAIDNDENWFSHNTLLNLDHSVQVTQEAPVVQPEPGPIMAESENCDTTENFGELIKKTMVESVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00775262;
90% Identity
iTF_00248093;
80% Identity
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