Hcha005104.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius charithonia
Gene Symbol
Rel
Assembly
GCA_030704555.1
Location
CM060814.1:5037144-5059760[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-34 9.7e-31 107.5 0.1 1 168 58 227 58 228 0.88

Sequence Information

Coding Sequence
ATGTCTACGAGTGAAGCAGAAACCGGTGATTCCAATATGGAGTCTCCATCATCATTTAATTCTGAATCTCCATATAGTTCACCTTCTCAGCAAGTGCCCCAGCTTACTGCTAACATATCACAACTATCATGGGTGGGAAATTCTTTTGGAAAAAATGGTAAACAGCCAGAGCTAGTAATAGTGGAACAACCACAAAATCATTTCAGATTTAGATATAAAAGTGAAATGATTGGCACACATGGTTGCCTTCTTGGCAAATCTACttttaatagtaaaacaaaaactcATCCAACTGTTGAGttaaaaaacttTGTTGGAAACGCCCTTTTGAGATGTACGTTAGCAAGGCACAATGGTCCAGATGAACATCCACACAAATTACTCGAAGATGATCAAGATCGTGATGTCAGCAGTATGGTGCCACAAAATGGATCGTACAGAATTGCATTTAGCGGCATTGGAATAATACACACTGCTAAAAAAGATGTCCCAGAATtacttttcaaaaaatatacacaaggACAACGTGATAACGCAATTAATGAGCataagctAAGAGTTAAGGCGGAGATGGATGCCaagaatatgaatttaaatatcgtTCGGCTCAAATTTAGCGCTCATAACTTAATAACCGATGAAGAGATTTGCCGGCCAGTGTTTTCCGAGCCTATACACAATTTGAaaaGCGCCTCCACAAATGATTTGAAGATATGTCGTATAAGTCGGTGTATCGGGAAAGCAAAAGGTGGTGACGATGTTTTTATATTCGTGGAGAAAGTAAACAGAAaaaatatccaaATAAATTTCTTTGAACTTGATAATGGTGAAAGAGTTTGGTCGGATACTGGAAAATTCTTACAGAACGACGTGCATCACCAATACGGCATTGTTTTCAGGACGCCACCATACAGAGATATAGACATAACACACGATGTTAAAGTGTTCATAGAGCTAGTGCGCCCCAGCGACGGCAGGACCAGTGAACCTAGAGAGTTTACATACAAACACGGCTATGgctcaaataaaaaacgtaaagctAATTCGTCTTATTCATCCTTAGACAGCATCGaaagttcCTATAAACAACAGTTTAACGAAATACCGGCGACTATTCAGTATATTGATcAAAATGGTGActacaatatggataaagatAATATGAAGGATGTTACATATACTATATCTGTACCACAAACTGCTCAAGTGGCGCCTACATCTGCATCCATTATGGCGGACGCAATGTGCCAGAACATGGGTGTGAATTCGAATCCCGGACACCACACATTTAGTCCTCTCTTAAGTCAACCAAATGTTCCTGAAGCGCCGGTtccaatattacaatttaactcATCAGAGTTAGATCGAATTGTAACTAGAGATATACCGTCGgaggaaaaaaaacttttactcgATACAGATTTAAGtgagtaCTTCAAGCAATTTGGCGCAAGCGACGATGATATGCCTAGTGCTATGGCGAATTTCCTAAAGTCCTCAATGCTGGTACCCGACTCGGCAAAGCCAGAGAATGTAAACATCAAAACGCAAGACAGTGTCAAGAACACAAGGAAGAAAAACAGTGAATATTCAGCTTCATATACACATGAAGATGGTACTGAAGTAAAAAAGCTCGTCAAGGAATTGTGCGAAATGATCCGGAACAGATCCAGTGATAAGAAACACCTGATTAAGGATAAACTGGACAGATTGTTTGAAATACGACTTGGCAACGGTGATACatttCTACACATGACGCTGGCCAGCAACCAACCCAGCTTGGAGTATATAGTTAAGCTTATCCACAGCATGAAAATGCCAAGGCTGTTAAACTTAAAGAATAATCAATTTCAAACCATCCTTCACCTTGCTATTGTCAACGATATGCCGAGATTGGTGAACTTACTCGTATCGAAAGGTTGTAATCCAATGGAGGAAGACGGTGAAGGCAATAACGCAGTACACTACGCAGTTATGTATCAATCGTGTCTCACGCCGCTCCTTGAAGCGATACGCCTACACGCAGTGCCTTATGATATCGATGCTTTCAATAAcgAGAAACAGACTGCGCTGCACCTCAGCGCGGTATATGGCAGTGCTGAAAGCGCTGCAGCGCTTCTACGGCACGGCGCAAAGAAGGACGTTCGCGACACCGCGCTGCGCACGCCGCTGCATCTAGCTGCGTACGACGACTGCAGTGCTGTCGTGCGAGTTTTACTTGAAAAGGCCACACAAGATGAAATCGACGCAGTGGATGGAAAAGGTTACACAGCTTTACAAATAGCATGCGATTCTGAAATTCGGAAAAATACActtgaaataattcaaatactTCTGGAACATAAGgcgGATCCAAATAAGCACGAAGACTTTAATCAGCCTGCGTTTATACTCGCTCGACACAAGCCGGAAATGTTAAAGATTCTCAAACCACACACAAGTGACCAACTTCTGACGGAAGATATAAAATCTGAGCCCGAGGATGAATTTGATTCGGCCGAAGAAGGGGAGGACGAGCCTACCTCGCTAGCAGAGCTGCCCCTCTACGCGCAAGAAGTATCTGAACTGTTAGAAAAGAACGGGGCGTGGCGCGATTTGGCGCGCTCCGTGCAACGCGGCGAGCTACTGTCGGTGCTTAGCGCCGCGGAACACCCGGCGACACGTCTTTTGGAGCACATCAAGAATTGTGACGACATGACGTCGAAGTCATTGGAGGTACTGCTCAGGTCACTAGGTCAAATCGAAGCAGCCGCGGctataagaaaacatttaacTGACTAA
Protein Sequence
MSTSEAETGDSNMESPSSFNSESPYSSPSQQVPQLTANISQLSWVGNSFGKNGKQPELVIVEQPQNHFRFRYKSEMIGTHGCLLGKSTFNSKTKTHPTVELKNFVGNALLRCTLARHNGPDEHPHKLLEDDQDRDVSSMVPQNGSYRIAFSGIGIIHTAKKDVPELLFKKYTQGQRDNAINEHKLRVKAEMDAKNMNLNIVRLKFSAHNLITDEEICRPVFSEPIHNLKSASTNDLKICRISRCIGKAKGGDDVFIFVEKVNRKNIQINFFELDNGERVWSDTGKFLQNDVHHQYGIVFRTPPYRDIDITHDVKVFIELVRPSDGRTSEPREFTYKHGYGSNKKRKANSSYSSLDSIESSYKQQFNEIPATIQYIDQNGDYNMDKDNMKDVTYTISVPQTAQVAPTSASIMADAMCQNMGVNSNPGHHTFSPLLSQPNVPEAPVPILQFNSSELDRIVTRDIPSEEKKLLLDTDLSEYFKQFGASDDDMPSAMANFLKSSMLVPDSAKPENVNIKTQDSVKNTRKKNSEYSASYTHEDGTEVKKLVKELCEMIRNRSSDKKHLIKDKLDRLFEIRLGNGDTFLHMTLASNQPSLEYIVKLIHSMKMPRLLNLKNNQFQTILHLAIVNDMPRLVNLLVSKGCNPMEEDGEGNNAVHYAVMYQSCLTPLLEAIRLHAVPYDIDAFNNEKQTALHLSAVYGSAESAAALLRHGAKKDVRDTALRTPLHLAAYDDCSAVVRVLLEKATQDEIDAVDGKGYTALQIACDSEIRKNTLEIIQILLEHKADPNKHEDFNQPAFILARHKPEMLKILKPHTSDQLLTEDIKSEPEDEFDSAEEGEDEPTSLAELPLYAQEVSELLEKNGAWRDLARSVQRGELLSVLSAAEHPATRLLEHIKNCDDMTSKSLEVLLRSLGQIEAAAAIRKHLTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00781593;
90% Identity
iTF_00779292;
80% Identity
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