Hros015325.1
Basic Information
- Insect
- Hedychridium roseum
- Gene Symbol
- lilli
- Assembly
- GCA_963989215.1
- Location
- OZ022320.1:3082217-3094087[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-08 0.0013 18.1 0.9 44 144 19 117 16 153 0.59 2 2 2.9e-07 0.0054 16.1 0.1 323 381 182 241 172 248 0.82
Sequence Information
- Coding Sequence
- ATGACGGTTTTGATAACGAACCGAATCGTTTTGCAGGTGAACCCCGACGCCCAGGACCGCACTACCCAGCAGATCCAGTCGAAGCTGGGCAACTATTCGCTGGTGAAGCATCTCCTGGACGAGCCGAAACGTTTGATCGGCATCGAGGGAGTTCCGGCGAGTCCGGCACCGTCTTCCGGTTCGTCGTCGCTACGGCCGATCTCCGGGACGGTGAGCTCGAGTTCCCGCTGTTCGCCTTCTACGCAGGAATTCAAGAAACCCGGTGGCCCGAGAACGAAttcctcgtcgtcgacgtcgacgtcagCGTCGACGAGCGTCGCGGGTTCCTCGGCCAGCCACACCGGCCAAAGGGGCGGTTTTGTAAAACCGGCCGACAGCAAACCACCATATGGCGGCAGGGGCGGCTACCCTGGCCAACCGGTTAAACATGCCGGCAGTAGCAACGATCATCGTAATCACGGATTGCTGCCGGCAAAAGGCCCCCCGGCCAATTCCCTCGGTGGAGCTGCCGGCACTTCGCTTCCCGGAGGATCTAGGATCCACTCGGCCGGAAGCAGACTCTCCAGGCTACCTCTGGATAACGGACCAAACTCTAGGCACGGTCCAGCAGAGAATTCGGCCGAATTGGAGAACATCTTAAAGGAGATGACTGTCCCGTTGACACCATTGACAGCCATCGCCCAGACACCCAGGAAAGAACTGGAGTCCAAGTTTACGTTCAACCCCGTACTGGCGAAGTTGACTGAAGTCCCGCCACCGGAGCCCGTGAAGCCTCGTAAGTAA
- Protein Sequence
- MTVLITNRIVLQVNPDAQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPSSGSSSLRPISGTVSSSSRCSPSTQEFKKPGGPRTNSSSSTSTSASTSVAGSSASHTGQRGGFVKPADSKPPYGGRGGYPGQPVKHAGSSNDHRNHGLLPAKGPPANSLGGAAGTSLPGGSRIHSAGSRLSRLPLDNGPNSRHGPAENSAELENILKEMTVPLTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPPEPVKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -