Basic Information

Insect: Hedychridium roseum
Gene Symbol: bab2
Assembly: GCA_963989215.1
Location: OZ022318.1:4899551-4922111[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.9e-12 1.4e-09 37.6 0.0 1 39 404 443 404 447 0.90

2 4 5.7e-12 4.3e-09 36.0 0.1 2 39 459 496 458 499 0.94

3 4 2.1e-18 1.6e-15 56.6 0.0 2 45 514 558 513 558 0.97

4 4 2.4e-18 1.8e-15 56.4 0.1 1 42 565 607 565 608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.9e-12	1.4e-09	37.6	0.0	1	39	404	443	404	447	0.90
2	4	5.7e-12	4.3e-09	36.0	0.1	2	39	459	496	458	499	0.94
3	4	2.1e-18	1.6e-15	56.6	0.0	2	45	514	558	513	558	0.97
4	4	2.4e-18	1.8e-15	56.4	0.1	1	42	565	607	565	608	0.97

Sequence Information

Coding Sequence: ATGGAGACAGATCGTTATTGGGGCGTGCATTACAGCGGAGGCATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCGGTGTTCCACCAGCTTCTGCAGACCGAAGCCTTCGTGGACGTCACCCTGGCGTGCAACGAGGCTTCGTTAAAAGCGCACAAGGTGGTGTTGTCGGCATGCAGTTCCTACTTCCAGAAGCTCCTGCTCTCCAACCCCTGCAAACATCCGACCATTATAATGCCGCAAGATGTTTGCTTCAACGATCTCAAATTCATCATAGAATTCGTCTACAGGGGTGAAATAGACGTGTCACAGGCCGAACTACAGTCGCTCTTAAAGACGGCTGATCAGTTGAAGATCAAGGGCCTGTGTGAGGTACCGGAAAGCAGAGACGGTGGGCCATCAGTGAGTCTGAGTTCACCCCCGAGGGAGCCAGGCACACCAAGGTTGAACTTCACGAAACTGAAGAGACACCACCAGAGGTACAAAAGGGCCAGGACCAGTTTCGAACCGCGCGCTACGGATTCGCGACACTACGACAGGTACAAAGACGCAGAGGAGCCTGCCAAAAACACCGAGAATAACAACCGGGACAATCGTGACAACAACAAAGAGAATCATAGAGATTGGCAGGCCGAAGATGAGGAGTGCGTTGTGGAGGcatcagcagcagcagtagtCTTGGAAACCTGCCAGCGGAACAACAACGGTAACAACGGTACAAACAATAACAACGGTGACATGTTCTGTCACACAGGACTAGGTCACTACGGTCATCATCCGGATCCTGGAGAGGTCGATCTGCCTCCGGAGACCCAGCCGACACCACCAAGTGCCACCTTGGTGGGTACGACGATCACCCACCTCAGGGATCCGGATCATCACTCAGCAGGTGAACCGACAGGGCAGACTGTACTCGCGGAGATACAAAGCTGTGACAGTGTTAAGATCAAGTTCGAAACGTTGCACACGATGGATTCTTCGGATACCATCGATATCGACAGCCACATGTCAGATCGGGCGAGCGTCAGCTCGAAGAACGCTGCTGACAGTGACAACATGATGATGATCACTCCGGAACTTCTGGGTTTGATGCCGTCTGGAAGTTCGGTACACTCGGACTCTGGGGAAAACAATTCTCGAGGTCACTCCGGACAATCAGGATCGCATCATCACAGTTCTAAATCGTGGACCCAAGAAGATATGGACGCGGCCTTGGAAGCACTGAGGAATCACGACATGAGTCTCACAAAAGCTTCAGCAACGTTTGGTATACCGTCGACGACATTGTGGCAACGTGCTCACCGGTTAGGAATCGACACGCCAAAAAAGGATGGACCCACAAAGTCTTGGAGCGACGAGAGTCTGAATAATGCGCTCGAGGCACTCCGAACCGGCACGATTTCGGCGAACAAAGCGTCAAAAGCGTTTGGTATACCGTCGAGCACGTTGTACAAAATCGCGAGGAGGGAAGGCATCAGACTGGCCGCGCCGTTTAACGCCAGTCCTACGACTTGGTCCCCTGCGGATCTAGATCGGGCATTAGAGGCAATAAGGTCGGGACAAACTTCGGTACAGAGGGCCTCGACGGAATTTGGGATTCCCACAGGAACGCTTTACGGGCGATGTAAGCGAGAAGGGATTGAACTTAGTAGAAGCAACCCCACACCGTGGAGCGAAGACGCTATGACCGAAGCCCTGGAGGCAGTCAGgttGGGACATATGAGCATTAATCAAGCGGCAATACACTACAATCTTCCTTATTCGTCTTTGTACGGTCGCTTTAAGCGAGGAAAATACGAAGAACCATCGGTTAACGAAATGTCGCAAGATGGCACCAGTCAACATTTCCATCAAAGCCCAAATCAGAACCACTCTTCTCCTCTTCCAGATCAAATGCCATATCAGGGCAGCTGA
Protein Sequence: METDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGGPSVSLSSPPREPGTPRLNFTKLKRHHQRYKRARTSFEPRATDSRHYDRYKDAEEPAKNTENNNRDNRDNNKENHRDWQAEDEECVVEASAAAVVLETCQRNNNGNNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSAGEPTGQTVLAEIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSGSHHHSSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPSVNEMSQDGTSQHFHQSPNQNHSSPLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00391429;
80% Identity: iTF_00773918;