Basic Information

Insect: Hedya salicella
Gene Symbol: -
Assembly: GCA_905404275.1
Location: FR990097.1:42823096-42838991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.3 1.5e+02 4.5 0.1 1 23 125 147 125 147 0.92

2 15 0.00056 0.063 15.1 2.2 1 23 288 310 288 310 0.99

3 15 6.7e-05 0.0075 18.0 0.3 1 23 316 339 316 339 0.96

4 15 0.00047 0.053 15.3 3.7 1 23 344 367 344 367 0.94

5 15 0.00027 0.031 16.1 2.9 2 23 531 552 530 552 0.97

6 15 0.00051 0.057 15.2 3.1 1 23 558 580 558 580 0.99

7 15 0.36 41 6.3 4.5 1 23 637 659 637 659 0.96

8 15 9.4 1.1e+03 1.8 0.1 2 23 667 688 666 688 0.92

9 15 0.0047 0.53 12.2 1.6 1 23 694 716 694 716 0.95

10 15 0.00031 0.035 15.9 1.2 1 23 722 744 722 744 0.96

11 15 0.00072 0.08 14.8 2.1 1 23 753 775 753 775 0.98

12 15 0.00017 0.019 16.8 0.6 2 23 822 843 822 843 0.97

13 15 0.038 4.3 9.3 6.2 1 23 860 882 860 882 0.95

14 15 1.5e-06 0.00017 23.2 0.7 1 23 888 910 888 910 0.98

15 15 7e-07 7.9e-05 24.2 3.1 1 23 916 939 916 939 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.3	1.5e+02	4.5	0.1	1	23	125	147	125	147	0.92
2	15	0.00056	0.063	15.1	2.2	1	23	288	310	288	310	0.99
3	15	6.7e-05	0.0075	18.0	0.3	1	23	316	339	316	339	0.96
4	15	0.00047	0.053	15.3	3.7	1	23	344	367	344	367	0.94
5	15	0.00027	0.031	16.1	2.9	2	23	531	552	530	552	0.97
6	15	0.00051	0.057	15.2	3.1	1	23	558	580	558	580	0.99
7	15	0.36	41	6.3	4.5	1	23	637	659	637	659	0.96
8	15	9.4	1.1e+03	1.8	0.1	2	23	667	688	666	688	0.92
9	15	0.0047	0.53	12.2	1.6	1	23	694	716	694	716	0.95
10	15	0.00031	0.035	15.9	1.2	1	23	722	744	722	744	0.96
11	15	0.00072	0.08	14.8	2.1	1	23	753	775	753	775	0.98
12	15	0.00017	0.019	16.8	0.6	2	23	822	843	822	843	0.97
13	15	0.038	4.3	9.3	6.2	1	23	860	882	860	882	0.95
14	15	1.5e-06	0.00017	23.2	0.7	1	23	888	910	888	910	0.98
15	15	7e-07	7.9e-05	24.2	3.1	1	23	916	939	916	939	0.98

Sequence Information

Coding Sequence: ATGGACCACCACATGACGGAAATGGACCCCCTGAGTACATATGACTACTCAACTTACAATTACCCACACATGCAATATTCCTACCCATACGAGATAAAGTTAGAACAACCTCTATCGCACTATGCCCACTTAGCAAACATAGCGAACACTGCACAGCAAAACCCACAGCCGCTTACCGAAGTACCTCTTACTGTAGTTCCTGAGACAGCTAGCAATGATAACCTGGCTCTACCGACGAATCCAACAAGCAGCCAAAATAGTCAAGAAAATAGTGATGTGAAACCGTTGTTTGACTTGAATAAAGTTAAGAAAGAAGGCGGAAAGAAGAGTAGCTACTGGTCGCAGAAGATAACAGATGAAAACTTCCCGTTCTATGCCTGTGCTCTATGCAATGTTAGCTATAAGCTGCTTAGAGAATTAGATTCCCATCTAGTTGACCATAAAGAGAGACTTACTAGCTATGATTTGCGGATGAAGAACAAGTTAAAGAAGAAGCAGCTGAAAAAGGAACAGAAGAAGCTAAAGAAGTTGAAGAAGGAAGTGAAACAGGAGGAGATTGAGATTAAACCGGAGGATGGTTATATCGGGAACGAGAAAGCTGCTGATTTTGTTGAGAATACCTTGTTAAATGATACTTCGGTTTCTGGAAATGTTGAAAACGTTCCAAAAACGAATAGTGTCCCTGTAAATAATGAGGTTCCTGTAAATAATGATGTTTCAGGGAATAATGGTAATGTTGCTAGTAatgatattgtaaataaaagtgCTGATAATAATGAGGGGAGTGTAAATAAAGTAGCAAAGGCAGAAGAACCGACTGCGGAGAAGGAGGTTGAGTACAATAAAGATTTGGAGAAGATTTACAAATGTTCTGCTTGTCAGAAGCAGTTCTCATTAAGCTATTACTTAAAACTACATGTCAGATCTCATACAGACGAGAAACCGTACACTTGCGCGGAATGTGGGCAGTCGTTCATAACGGCGAGCAAACTCGGCCGGCACAACAAGCGCATACACCTCGCCATCAAGTACCAGTGCCGGATCTGCTACAAGGTTTTCACTAGATTCGAGTATCTCACGcgccattttgacaaaaaaCATGCAGAGGACAAGTTGGAGGGCGAACCATATGaCTACAACGCGATCCTGCCCTACCTGAAAGAGCTGGAGGAACAGCTCCGGGAGAAAGCCGAGGCGGAGGCCAAGCCCAAAACTGAGGAGCTGTGGAGCGAGTGGCCCGAGCTGGACGCGGCGCTGACGCAGGACAGGAAGGACTTCCTCGAGGACAGCAAGGACTTCGCCGTCAACCACCTAGACATTGTCATGGAAGATGTCAAGGTACCCGTGGAAACTATGGAAACGGAGATCGAGATCAAGATAGAGAAGGAGCCGGACAACGAGAACGGTAACGCGGACGACAACGGCGCGCACGACGACCTGCCCGACGCCGACCACGACGACGTCAAGGACGAGAGTCCATCAGACGAGGACTACTTCCCGTCCAACACGTGGGCGGAGCAAGCGCCCAGCATGGAGGCGGGGCCGCTGTCGCCGccgcgcggccgccgcgccaAGTCCGAGGGCGCGCTCACCTGCAAGATCTGCGACAAGAAGATCAGCACGCACTCCTACATGCGGATACATCTGCGGACGCACACCGGGGAAAAACCGTACAAGTGTTATATATGCAGCCGGGGGTTTATCACGTCCAGCAAGATGCACCGGCATGTGCTGACGCACTCCGAGACTTGGGACAAAGACGCTGTCAAAGTAGAAGGTGTGGATGTTAAGCAAGAAGAAAACGAGAACCAGGATGAGGAGGGCGGTGGCGATGACCAATCGAAAAAGAAGACCAAGGTGAAAAAGAAGAGAATTGAAAAGAAGAAACGCGACTACCAAAAGCGGCCGCACGCGTGCGAGTTCTGCCAGAAGCGATTCCTGCATTTGGAGATGCTGCAAGTGCACAAGAAGAGTCACGAGGGGGAGAGCGCGACCCTGAAGTGCTACTATTGCCTCGTGGACGTGCAGGACGAGGGCAGCCTCAAGCAGCACGAGGCCTCGCACGCGGGGCCCAAGCCCTTCCTGTGCACGCTGTGCGGGAAGGGGTACAAACGCCGCGAGACCATGGTATACCACCGCAAGAACCACAAATCTGAAAAGAAATTCATCTGCGACATTTGCTCTAAAACGTTCAACGCGCCGTGCAAACTGCAGCGGCACATCGTGAGTCACCGCGCGGACAAGTTCGTGCTGCGGTACGAGTGCCCGGTCTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTCGCCACGCACCAGAAGGAGGGGCTAATCCTCGAAGAGAACCGCAACGACATTCTAGCGATGGTGCTTCAGAACGCCCGTAAAATACCGAAGCAGGGCGACGCGCCGTCCAACCTGGCGGACCTCATCCCGGCCGACGAGCGGAGCCGCGTGTGCAACATATGCGGCGAGGTCTTCCAACACTTCTACTACCTCGAGGAACACCTCAAGAGTCACGGCTCCCGAATCGCCATCGAAGACGAGAACAAGGAAGAAGAACGGAAACACATTTGCCAAGTATGCAACAAAAGTTTCAAGTTACACTACTATCTTAAACTACACAGTTTCACGCACACGAAAGAAAAACCTTACATTTGCCAGCAGTGCGGAAAAGGGTTCATTACTAAAGGCAAACTTAAAAGGCATTTGGAGACGCACTCCGGGCTTAAAAAGTACCAATGTCACATTTGCTATAAATTCTTCACTAGGCCTAGTTATTTGAGAATTCACGTTCGGACGATTCATGGTAATCAGGATTATAACTTCAGGGTGGGCAAGGAGTTTGGTATAGCGGCGCCTCTGAACGCGTTGTCAGTTATGACGCAATATAGTGATTAA
Protein Sequence: MDHHMTEMDPLSTYDYSTYNYPHMQYSYPYEIKLEQPLSHYAHLANIANTAQQNPQPLTEVPLTVVPETASNDNLALPTNPTSSQNSQENSDVKPLFDLNKVKKEGGKKSSYWSQKITDENFPFYACALCNVSYKLLRELDSHLVDHKERLTSYDLRMKNKLKKKQLKKEQKKLKKLKKEVKQEEIEIKPEDGYIGNEKAADFVENTLLNDTSVSGNVENVPKTNSVPVNNEVPVNNDVSGNNGNVASNDIVNKSADNNEGSVNKVAKAEEPTAEKEVEYNKDLEKIYKCSACQKQFSLSYYLKLHVRSHTDEKPYTCAECGQSFITASKLGRHNKRIHLAIKYQCRICYKVFTRFEYLTRHFDKKHAEDKLEGEPYDYNAILPYLKELEEQLREKAEAEAKPKTEELWSEWPELDAALTQDRKDFLEDSKDFAVNHLDIVMEDVKVPVETMETEIEIKIEKEPDNENGNADDNGAHDDLPDADHDDVKDESPSDEDYFPSNTWAEQAPSMEAGPLSPPRGRRAKSEGALTCKICDKKISTHSYMRIHLRTHTGEKPYKCYICSRGFITSSKMHRHVLTHSETWDKDAVKVEGVDVKQEENENQDEEGGGDDQSKKKTKVKKKRIEKKKRDYQKRPHACEFCQKRFLHLEMLQVHKKSHEGESATLKCYYCLVDVQDEGSLKQHEASHAGPKPFLCTLCGKGYKRRETMVYHRKNHKSEKKFICDICSKTFNAPCKLQRHIVSHRADKFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLILEENRNDILAMVLQNARKIPKQGDAPSNLADLIPADERSRVCNICGEVFQHFYYLEEHLKSHGSRIAIEDENKEEERKHICQVCNKSFKLHYYLKLHSFTHTKEKPYICQQCGKGFITKGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHVRTIHGNQDYNFRVGKEFGIAAPLNALSVMTQYSD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00680854;
90% Identity: -
80% Identity: -