Hsal014209.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- -
- Assembly
- GCA_905404275.1
- Location
- FR990099.1:1458296-1474321[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 48 0.0013 0.15 14.0 0.1 3 23 93 113 91 113 0.97 2 48 0.00032 0.036 15.9 4.8 3 23 121 141 120 141 0.97 3 48 0.3 33 6.5 1.1 1 19 147 164 147 165 0.93 4 48 0.00032 0.036 15.9 4.8 3 23 172 192 171 192 0.97 5 48 0.3 33 6.5 1.1 1 19 198 215 198 216 0.93 6 48 0.00032 0.036 15.9 4.8 3 23 223 243 222 243 0.97 7 48 0.3 33 6.5 1.1 1 19 249 266 249 267 0.93 8 48 0.00032 0.036 15.9 4.8 3 23 274 294 273 294 0.97 9 48 0.3 33 6.5 1.1 1 19 300 317 300 318 0.93 10 48 0.00032 0.036 15.9 4.8 3 23 325 345 324 345 0.97 11 48 0.3 33 6.5 1.1 1 19 351 368 351 369 0.93 12 48 0.00032 0.036 15.9 4.8 3 23 376 396 375 396 0.97 13 48 0.3 33 6.5 1.1 1 19 402 419 402 420 0.93 14 48 0.00032 0.036 15.9 4.8 3 23 427 447 426 447 0.97 15 48 0.3 33 6.5 1.1 1 19 453 470 453 471 0.93 16 48 0.00032 0.036 15.9 4.8 3 23 478 498 477 498 0.97 17 48 0.3 33 6.5 1.1 1 19 504 521 504 522 0.93 18 48 0.00032 0.036 15.9 4.8 3 23 529 549 528 549 0.97 19 48 0.3 33 6.5 1.1 1 19 555 572 555 573 0.93 20 48 0.00032 0.036 15.9 4.8 3 23 580 600 579 600 0.97 21 48 0.3 33 6.5 1.1 1 19 606 623 606 624 0.93 22 48 0.00032 0.036 15.9 4.8 3 23 631 651 630 651 0.97 23 48 0.3 33 6.5 1.1 1 19 657 674 657 675 0.93 24 48 0.00032 0.036 15.9 4.8 3 23 682 702 681 702 0.97 25 48 0.3 33 6.5 1.1 1 19 708 725 708 726 0.93 26 48 0.00032 0.036 15.9 4.8 3 23 733 753 732 753 0.97 27 48 0.3 33 6.5 1.1 1 19 759 776 759 777 0.93 28 48 0.00032 0.036 15.9 4.8 3 23 784 804 783 804 0.97 29 48 0.3 33 6.5 1.1 1 19 810 827 810 828 0.93 30 48 0.00032 0.036 15.9 4.8 3 23 835 855 834 855 0.97 31 48 0.3 33 6.5 1.1 1 19 861 878 861 879 0.93 32 48 0.00032 0.036 15.9 4.8 3 23 886 906 885 906 0.97 33 48 0.3 33 6.5 1.1 1 19 912 929 912 930 0.93 34 48 0.00032 0.036 15.9 4.8 3 23 937 957 936 957 0.97 35 48 0.3 33 6.5 1.1 1 19 963 980 963 981 0.93 36 48 0.00032 0.036 15.9 4.8 3 23 988 1008 987 1008 0.97 37 48 0.3 33 6.5 1.1 1 19 1014 1031 1014 1032 0.93 38 48 0.00032 0.036 15.9 4.8 3 23 1039 1059 1038 1059 0.97 39 48 2e-06 0.00023 22.8 1.7 1 23 1065 1087 1065 1087 0.97 40 48 0.01 1.1 11.1 6.5 1 23 1093 1115 1093 1115 0.98 41 48 0.00047 0.052 15.3 2.9 2 23 1136 1157 1135 1157 0.97 42 48 8.2e-06 0.00093 20.9 0.6 1 23 1163 1185 1163 1185 0.98 43 48 1.2e-05 0.0013 20.4 0.3 2 23 1191 1212 1191 1212 0.98 44 48 8.1e-05 0.0091 17.7 1.0 1 23 1218 1240 1218 1240 0.98 45 48 3.3e-05 0.0037 19.0 1.5 1 23 1246 1269 1246 1269 0.98 46 48 0.00022 0.025 16.4 2.8 1 23 1421 1443 1421 1443 0.98 47 48 9.5e-07 0.00011 23.8 0.7 1 23 1449 1471 1449 1471 0.99 48 48 2.9e-06 0.00032 22.3 3.6 1 23 1477 1499 1477 1499 0.98
Sequence Information
- Coding Sequence
- ATGTCTTGCAACTATTTATCAGTAAAACCAGAGCGGCAATGGGCGGCCGCTGATATTCTAACTGAAGACACCCTGCGAAATGAAAGCCGGCCTATCGTCGACGGTAGTAGTGGTGCCCAAGCctctgaaattaaaaaagaactgCATGTTAACGCAACCAAAGTTGAAGTAAAACGTGTGGCTACAGACTCAAGTTCAGATGGAGCCGTTCAGACAGAAGAGAAACCAGGGATAACTCTCCGGGTGGCAGCACCGGGCTCCCACAGAAGATGGGCGTGTCCCTTGTGCGGCAAGAGCTCGTGGTCGCCGGCGCACCTGCGCGTGCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTACGTACTGTCTCACCTGCGCGTGCACTCGGGCGAGCGGCCCGCGTGCTGCCACGTGTGCGGCGCGCGCTTCCGCACCCACGGCAACCTGGCGCGACACCTGCGCGCGCACGCCGGCCTCCGGCCCTTCGCCTGCCCGCACTGCCAGAGGAGGTTCTCCCAAAAGTCAGTGCTAATAAAGCACATACGAATCCACACAGGGGAGACCCCGTATTCGTGCAACATCTGCCACAAACAGTTTTCCCGGAGCTTCACCCTTGCCTGCCACCGCCGCGTCCATGGCGACATCGTCAAGGAAGAAAAACCCGTGAAACAACCACCGCCTGCCCCAGAGAAATGGACGTGCGAAGTGTGCAATAAGATCTTCAAAAACAAATcctacaaacacacacacatgcAAATCCATGCTCAGACTAAAGACTATCAGTGTCGTGAGTGCGATAAGAAGTTTAGTAATGAAGTGAGTCTGCTAAAACATGTGAATGTGCATTCGGAGCAGGTTAGGAAGTGCAGTGTTTGTGGCAAGCAGTTGAAGACTCAAGCGAATTTGGCGAGGCATATGCTGGTGCATACTGGGGAGCGGCCGTTTCCTTGCAGCTATTGCAGTCAGAGGTTTACCCAGAAGTCGGTGTTGGTTAAGCATGAGAGGATACACACAGGTGAAATGCCTTATGAATGTCAGGTCTGCTTGAAGAAGTTTTCTAGAAGCTTCACGCTAGAGAATCATCTGAGGCGCGTGCATAATAAGAAGGGAAGAATTGAGAAGTCGGAGAAGTTGAAAAAAGAAGTTGAGAAAGTAAAGTGTGAGATGAAGCCGTTTTGGTGCGAAAACTGCGATAACTGGTTCAGTAGTGAGGAGTTTTATGTACATGAATGTACACAAGGTGGGAAGTTTGATTTAGGTGAAGTTTGTGTTGATAATGAGCCAGGGATTGATTATAGCGATAACGAAGCAGATAAAAGGGAGAGTCTATTAACAGATATTAAAGAAGAATTCGAAATAGATGCACACCCAGATGATAATAGAGAAATCCTTGAAATTAAACGGAAAGTAGAGTCCGTTCATGACGAATCTGCGGCAGTTGAACATGAAGATGCTTTCAGAGCTTTTGATAATTCAATTACAAGAGCTGATACAGACAGACCTATAGTTTGCAAGGTGGAGACGGTGCAGGATGAAGACCCAAGCAAACAGTACCCTTGTACTGTATGTAGGAAGCGATTCGCGAACTGCTACCTGCTGGACCGCCACGAAAGAACACACACTGGCGAGAAGCCTTACTCTTGTGAGGATTGTGACAAAAGGTTCGCGCTCAGTGGGGACCTGAACCGGCACCGGCGGACCCACACCGGTGAGAAGCGCTACTCCTGCCCTCTCTGCCCCAAGCAGTTCACCCGCAGCAGCACCCTCAAGCACCACCGTCGGCTACACGACGCCGTGACGTCTGAGCCATCCCGAACTGtcaattaa
- Protein Sequence
- MSCNYLSVKPERQWAAADILTEDTLRNESRPIVDGSSGAQASEIKKELHVNATKVEVKRVATDSSSDGAVQTEEKPGITLRVAAPGSHRRWACPLCGKSSWSPAHLRVHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRYVLSHLRVHSGERPACCHVCGARFRTHGNLARHLRAHAGLRPFACPHCQRRFSQKSVLIKHIRIHTGETPYSCNICHKQFSRSFTLACHRRVHGDIVKEEKPVKQPPPAPEKWTCEVCNKIFKNKSYKHTHMQIHAQTKDYQCRECDKKFSNEVSLLKHVNVHSEQVRKCSVCGKQLKTQANLARHMLVHTGERPFPCSYCSQRFTQKSVLVKHERIHTGEMPYECQVCLKKFSRSFTLENHLRRVHNKKGRIEKSEKLKKEVEKVKCEMKPFWCENCDNWFSSEEFYVHECTQGGKFDLGEVCVDNEPGIDYSDNEADKRESLLTDIKEEFEIDAHPDDNREILEIKRKVESVHDESAAVEHEDAFRAFDNSITRADTDRPIVCKVETVQDEDPSKQYPCTVCRKRFANCYLLDRHERTHTGEKPYSCEDCDKRFALSGDLNRHRRTHTGEKRYSCPLCPKQFTRSSTLKHHRRLHDAVTSEPSRTVN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773457;
- 90% Identity
- iTF_00773457;
- 80% Identity
- iTF_00773457;