Hsal042749.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- -
- Assembly
- GCA_905404275.1
- Location
- FR990120.1:2453663-2455942[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0051 12 7.4 1.9 18 43 7 29 5 30 0.94 2 18 6.2 1.5e+04 -2.5 0.3 19 43 36 57 32 58 0.57 3 18 0.0026 6.1 8.3 0.0 18 43 66 88 65 89 0.92 4 18 0.0071 17 6.9 1.8 17 44 96 120 94 120 0.92 5 18 0.0014 3.4 9.1 0.3 18 43 127 149 123 150 0.88 6 18 3e-05 0.07 14.5 1.0 15 43 154 179 151 180 0.89 7 18 0.031 73 4.9 0.6 17 44 185 209 181 209 0.88 8 18 0.0076 18 6.8 0.1 17 44 237 261 225 261 0.85 9 18 0.21 5e+02 2.2 0.3 13 43 282 309 277 310 0.82 10 18 0.0098 23 6.4 0.0 15 44 343 369 339 369 0.84 11 18 0.44 1.1e+03 1.2 5.2 18 43 391 413 383 414 0.88 12 18 5 1.2e+04 -2.2 9.1 6 29 408 431 405 443 0.71 13 18 0.001 2.4 9.6 2.8 6 43 437 471 431 472 0.83 14 18 0.051 1.2e+02 4.2 0.8 17 44 477 501 473 501 0.85 15 18 7.9 1.9e+04 -2.9 0.9 18 27 508 517 506 526 0.81 16 18 3.8 8.9e+03 -1.8 0.1 21 43 541 560 537 561 0.68 17 18 1.7 4e+03 -0.7 0.5 13 38 563 585 554 591 0.73 18 18 2e-05 0.047 15.1 2.6 10 44 594 627 589 627 0.84
Sequence Information
- Coding Sequence
- ATGAGTCCACCAGAATATGTCTGCGATTACTGCAGCCGCACATTCACGAGGAAATATAATCTTCAAACTCATATAGAAAACTGCCATATTAACTCTACTTGTTACTGCGAAATCTGTGACCAGAGATTCGGTAGCCCAGCTGGCTTGCAACTTCATCTCAGCAGAGGCCACAATCGATTTCTGCAGCCGTACCCAGAATGTGATCTCTGTGGACGCATCTTCACTAGGAAACAAAACGTAGTTTCACACATGGTGACCGTTCATCTGCAAGGATTAGGGCCTCTGATAGAATGCCATGTTTGCTACAAAACTTTTACAACTGAAAGGAACTTGAAGAGGCATATGAATCAGCTACACAACCCTGATGTGCAATATCCCACTTGCGACTACTGTAAAAAAGTCTTCAAAGGCAAGCATACATTGCTAGGTCATATACAAGCCACTCATAATGTTCTAAAAGGGATAATTAAATGTGAATTGTGTGGCAAAGTTTACACTAATAACAGAAATCTGAAGAGGCATATTGAGATGTATCACGGAGAGAAAGAACAATTCAGGTGCCCTCTCTGTCCCAAAGTTTATACGTCTAACCAAAGTTTGCGTCGCCATTCCAGAACCAGGCATAATGATCGGGAACCCAAGACCGAATCGAATATGGAACAGGACACTGACTactacaattttgattttaaagtgCAACTCCACGAGTTCTATTGCGAATATTGTGACAAGAATTTTGCTGAAGAACCTTCGCTGCGTCAACATGTGAAGTCGGAGCATTCTTTCAAAATGTTCTATGAATACTGCAGAAATTCCTTATTGAAGCAGACGGGGAATAGCGAAAAGCAACGCTTTTATAACTGCGAGAATTGCAACAACGCTTTTAACTCCCTCTATGAATTGAAGGATCACATGAGGACCAGTCATGATAGAGAGTACTCGCTCTCTACTTGTAACGTTTGCTTCTCTAAGTTCTACAGTAAAGAAACCATAATAGAGCATAAGAAAATATGCTTCCCGCCGCCTAACGTGAATAATTGTAACTACTGTGACAAATTATTCACAGATATCTCTAGTCTCGAGTTTCATATCAGGATTTTTCACCCGCAAGCTCAAATAGCGGACAACGATGTGTCGTCAACTAACCCTGAAGACACGGAAGCTGGCTTTAAATGTCCTCACTGCAACAGGATGTACTACAGTGACCGTTCTTTGAAACACCATATGAAGCTAAAGCATACAACTGACGAAGCAGTTGAATGCGGCTTGTGCGGAAAAATGTGTAATAACAAGTATTACTTAGCGTCCCATATTAAAATCGTGCACAACGACGACTCCTGGTCCAAATGTGATTATTGTGACAAGCAGTTTAAATCCAAGAGGAATATCCGACGTCACATCGAATACACACACTTGGGTATGCAGCGATACAAATGTATAGAATGTGAAACGCTCTTCAAAGAAAAGAGAAGTCTTAGGAAACACGTTCGGACAAAGCACCCAGACTCAACAGTTTTTCCGCAGTGTCATATCTGTTACAAACGCTTTGAATCCGCGAAATCCTGCAAGATTCACCTGAAACTGATCCACTCTTTCAACATGAACACGTACCCTTGCGATCTCTGTTCAGTATCCTTCAGCTCCAACGAGGCTTTAAGCATCCACCTTAAAAACAAGCATTTAGCTGAAGACCAAATTTTCAAATGCGAACCGTGTAACCTAGTATTCAACGGTTCGGAGAAGTTCGAACAACACATCGAGATCTACCATGTAACTCTACTTCCAAACATAAAACAGAAGACTTTACCCCGTTGTATTATATGTATGAAGGACTTCAGTACACGAAAGACTTTGAAGCGGCACATAAAGAAGTTCCATAATGAGTTTGATGTCGAAGAGCTGGCAACATTTGGCTCGAAGAAGAGAATGTTCAACATTGACTGCGAGGAATGTATACAGAATTTCAACAATGAATTCTACCTGGATGTATACCAGAAGTTGAAGCATTTGAAAGACTCGATCGTCTTCAAATGCGAGAGCTGTTCCTCGTCCTACAATTGCCTGGAATATTCAGTACAGCGGCATAAGCTGTCCAATTTTGAATCTTGTAAAAGCAAGATGATTCTAAGTGAGTTGTGTACGGCTGAGATGAGTGATGAAGCTTTGGATACCTGGGTAGAGAGTGCGGAAGCTGAGAGTACTACAGGAGAGTTGAATGTGAAGGTGGAACCAATGGACGAGGTGGAAGATATTGTGAAGACTGAGCCAATGTCGCCGTAA
- Protein Sequence
- MSPPEYVCDYCSRTFTRKYNLQTHIENCHINSTCYCEICDQRFGSPAGLQLHLSRGHNRFLQPYPECDLCGRIFTRKQNVVSHMVTVHLQGLGPLIECHVCYKTFTTERNLKRHMNQLHNPDVQYPTCDYCKKVFKGKHTLLGHIQATHNVLKGIIKCELCGKVYTNNRNLKRHIEMYHGEKEQFRCPLCPKVYTSNQSLRRHSRTRHNDREPKTESNMEQDTDYYNFDFKVQLHEFYCEYCDKNFAEEPSLRQHVKSEHSFKMFYEYCRNSLLKQTGNSEKQRFYNCENCNNAFNSLYELKDHMRTSHDREYSLSTCNVCFSKFYSKETIIEHKKICFPPPNVNNCNYCDKLFTDISSLEFHIRIFHPQAQIADNDVSSTNPEDTEAGFKCPHCNRMYYSDRSLKHHMKLKHTTDEAVECGLCGKMCNNKYYLASHIKIVHNDDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSTVFPQCHICYKRFESAKSCKIHLKLIHSFNMNTYPCDLCSVSFSSNEALSIHLKNKHLAEDQIFKCEPCNLVFNGSEKFEQHIEIYHVTLLPNIKQKTLPRCIICMKDFSTRKTLKRHIKKFHNEFDVEELATFGSKKRMFNIDCEECIQNFNNEFYLDVYQKLKHLKDSIVFKCESCSSSYNCLEYSVQRHKLSNFESCKSKMILSELCTAEMSDEALDTWVESAEAESTTGELNVKVEPMDEVEDIVKTEPMSP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680825;
- 90% Identity
- iTF_00773074;
- 80% Identity
- iTF_00773074;