Basic Information

Insect: Hecatera dysodea
Gene Symbol: -
Assembly: GCA_905332915.1
Location: HG995316.1:4247239-4249861[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0035 0.38 12.4 1.1 1 23 5 27 5 27 0.92

2 15 0.066 7.1 8.4 0.2 1 23 100 122 100 122 0.97

3 15 0.00096 0.1 14.1 0.2 1 23 126 148 126 148 0.95

4 15 0.011 1.2 10.7 0.6 1 23 153 176 153 176 0.95

5 15 0.00067 0.072 14.6 2.7 1 23 182 205 182 205 0.93

6 15 0.17 18 7.1 1.2 1 11 212 222 212 226 0.90

7 15 0.079 8.4 8.1 1.5 1 23 341 364 341 364 0.95

8 15 0.043 4.6 8.9 0.3 2 23 389 411 388 411 0.95

9 15 0.13 14 7.5 0.1 1 23 435 457 435 457 0.93

10 15 8e-05 0.0085 17.5 0.2 1 23 461 483 461 483 0.98

11 15 8.3e-05 0.0089 17.5 0.5 1 23 488 511 488 511 0.96

12 15 0.006 0.64 11.6 0.4 2 23 518 540 518 540 0.93

13 15 0.057 6.1 8.6 6.5 1 23 547 570 547 570 0.96

14 15 4.5e-05 0.0048 18.3 4.8 2 23 577 598 576 598 0.96

15 15 0.00011 0.012 17.1 1.7 1 23 604 626 604 626 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0035	0.38	12.4	1.1	1	23	5	27	5	27	0.92
2	15	0.066	7.1	8.4	0.2	1	23	100	122	100	122	0.97
3	15	0.00096	0.1	14.1	0.2	1	23	126	148	126	148	0.95
4	15	0.011	1.2	10.7	0.6	1	23	153	176	153	176	0.95
5	15	0.00067	0.072	14.6	2.7	1	23	182	205	182	205	0.93
6	15	0.17	18	7.1	1.2	1	11	212	222	212	226	0.90
7	15	0.079	8.4	8.1	1.5	1	23	341	364	341	364	0.95
8	15	0.043	4.6	8.9	0.3	2	23	389	411	388	411	0.95
9	15	0.13	14	7.5	0.1	1	23	435	457	435	457	0.93
10	15	8e-05	0.0085	17.5	0.2	1	23	461	483	461	483	0.98
11	15	8.3e-05	0.0089	17.5	0.5	1	23	488	511	488	511	0.96
12	15	0.006	0.64	11.6	0.4	2	23	518	540	518	540	0.93
13	15	0.057	6.1	8.6	6.5	1	23	547	570	547	570	0.96
14	15	4.5e-05	0.0048	18.3	4.8	2	23	577	598	576	598	0.96
15	15	0.00011	0.012	17.1	1.7	1	23	604	626	604	626	0.98

Sequence Information

Coding Sequence: ATGAAAAATCTATACATATGCTTCTATTGTCATCTACAATTTATCGACCCTGCATCGTTGAGGCAACATAACACAGAACACGGTCTTTTAGCAGCTTCGCAAATCAAATACGCTTTGTCGAAGCTCAGAAAGTACGAATTAATCAAAGTAGATATAACTGATTTAGGCTGCAGGCACTGCGATGATCTGATACCAGATTTGCCTACCCTAAAATTGCATCTGATTGAAAAGCATAAGAAGAATTTTGATCCGAAATATGGGGATGGCATACTTCCGTTCAAAGTTACACTGAACGAATTCCCTTGCGCTctctgtatggaaaaatacaCGGAATTCAAGGCACTGAACCAGCATATGAACGTACATTTCCAGAATTTTATATGCGAGCAATGTGGCACGGGTTTCATAACTCCAGAACGTTTGAGGACTCACGCGTTTTCGCACAAAACAGGGTCCTTTCCTTGCGACAgctgtaaaaaagtattccggTCTACTAACGCTAAAAACGAGCACTACGCCACCGTACACATGAAAGTGAAACGCCACAGATGCCCTCACTGCCCCGAAGTATTTAGGAACTACTTCCAAAGAAATAAGCACATTTCAGCCATCCACGGTTTGAAGTTAAAAGAATTCAAATGCACTTTTTGCCCTAAAGTTTTCACGATCAGTGGATCGGACTCCGAAATACCAGACGTGAAGCGAAGAATCATCCCGTTATTCCAAGTATCATACGACAGGAGTTTGTGTAGGCCTCTCGGGACTTTGATAGATTTCAGTAGACTTCGAAAGAAGAGTGTTAGAGCCATCTCTCCAGTTCCAACATTAGATTACTCTTCATCTCGTAGTCCATCACCTGTCTACGTAGAGAATGCACCATCGCCTTACATTGATAGTCCACCAACATTGCCCATCCAAACTGTAAAGCCGAAAGTAAAGAAAACTCCAGATATAAGGCAGAATGCTCTGGCAGTGTTTGAATTTTCAACTGTGTACCCATTCGTTTATGGAAGCAACAAATTCAAATGCTTCGTTTGCTCTCAGCCGTTTTTGGACTTGAATGAATTAAAGCTGCACATGCATTTGTCCCATACTTTTGCTCCACTCAAGAGATTAGTGAATAATAGAAGAGAGAATGTCTTGAAAGTAGATGTGAGTGATATCACTTGCAAGATGTGTTCAAACAAACTTCCCAGTTTAGTGGAACTCAAACGTCACCTCAAAGAGATACACGATAAACCAATGGATTTAGAACTCCAAGACAATATGATACCGTTCAATCTTGAACTCGTAGATGATGCTTACAGATGCGTGATTTGCGAACAGAGTTTCATAAAAGTTCGAATCTTAGTGATACACATGAGTGAACACTTTAATAATTACAGTTGCGAGATTTGCGGGTCGGTCTTCATGACTTTACGCCTCTTAAAGAAACATTTAGAAGTCCATGACTCCGGAAACTTTCCTTGCGATCGATGTAATAAAGTTTTTAGTACTCCTTACAAAAGGACGTTACACATTCGAGGCGTCCACTTAAAGCAATGTCCACGAAGATGTCCCATGTGTCCTGAAAAGTTTAACTCGAATTATAAAAGGACAATACATTTACAAGATGTCCATAATCAGGAGACAAGGGTGCATAAATGTAAGACTTGCGGTCGAGGGTTTAATCTGAAGTATCATTTGGTTTGTCATGTGCGTTCAGTCCATCTTCAGGAAAGGAATCAGCAGTGCGATGTATGTCACCAAAGATTTTGTAACAAAGAATCTTTGAAGCGACATATGGTTATACATACGGGAGAGAAAAACCATAAGTGTGATGTTTGTGGAATGGCGTTTCTGCGGAGAAAGAATTTGAAGGACCATTTACGTTTGCATGATATTAGTTAG
Protein Sequence: MKNLYICFYCHLQFIDPASLRQHNTEHGLLAASQIKYALSKLRKYELIKVDITDLGCRHCDDLIPDLPTLKLHLIEKHKKNFDPKYGDGILPFKVTLNEFPCALCMEKYTEFKALNQHMNVHFQNFICEQCGTGFITPERLRTHAFSHKTGSFPCDSCKKVFRSTNAKNEHYATVHMKVKRHRCPHCPEVFRNYFQRNKHISAIHGLKLKEFKCTFCPKVFTISGSDSEIPDVKRRIIPLFQVSYDRSLCRPLGTLIDFSRLRKKSVRAISPVPTLDYSSSRSPSPVYVENAPSPYIDSPPTLPIQTVKPKVKKTPDIRQNALAVFEFSTVYPFVYGSNKFKCFVCSQPFLDLNELKLHMHLSHTFAPLKRLVNNRRENVLKVDVSDITCKMCSNKLPSLVELKRHLKEIHDKPMDLELQDNMIPFNLELVDDAYRCVICEQSFIKVRILVIHMSEHFNNYSCEICGSVFMTLRLLKKHLEVHDSGNFPCDRCNKVFSTPYKRTLHIRGVHLKQCPRRCPMCPEKFNSNYKRTIHLQDVHNQETRVHKCKTCGRGFNLKYHLVCHVRSVHLQERNQQCDVCHQRFCNKESLKRHMVIHTGEKNHKCDVCGMAFLRRKNLKDHLRLHDIS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00822235;
90% Identity: iTF_00852078;
80% Identity: -