Basic Information

Insect: Hecatera dysodea
Gene Symbol: Bcl11a
Assembly: GCA_905332915.1
Location: HG995302.1:17749468-17772551[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.07 7.5 8.3 8.6 1 23 269 291 269 291 0.96

2 12 9e-06 0.00096 20.5 1.9 2 23 299 320 298 320 0.95

3 12 0.076 8.2 8.2 0.3 1 23 324 346 324 346 0.97

4 12 9.6e-05 0.01 17.3 2.8 1 23 351 374 351 374 0.97

5 12 0.0015 0.16 13.5 0.2 3 23 380 401 379 401 0.96

6 12 0.0088 0.95 11.1 0.0 2 20 416 434 416 436 0.94

7 12 0.00094 0.1 14.2 0.1 3 23 450 471 450 471 0.95

8 12 0.00062 0.067 14.7 1.3 2 23 494 516 494 516 0.96

9 12 0.03 3.2 9.4 2.1 2 23 528 549 527 549 0.96

10 12 0.0002 0.022 16.3 4.9 1 23 555 577 555 577 0.99

11 12 2.5e-06 0.00026 22.3 0.3 1 23 583 605 583 605 0.98

12 12 0.00079 0.085 14.4 0.9 1 23 611 634 611 634 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.07	7.5	8.3	8.6	1	23	269	291	269	291	0.96
2	12	9e-06	0.00096	20.5	1.9	2	23	299	320	298	320	0.95
3	12	0.076	8.2	8.2	0.3	1	23	324	346	324	346	0.97
4	12	9.6e-05	0.01	17.3	2.8	1	23	351	374	351	374	0.97
5	12	0.0015	0.16	13.5	0.2	3	23	380	401	379	401	0.96
6	12	0.0088	0.95	11.1	0.0	2	20	416	434	416	436	0.94
7	12	0.00094	0.1	14.2	0.1	3	23	450	471	450	471	0.95
8	12	0.00062	0.067	14.7	1.3	2	23	494	516	494	516	0.96
9	12	0.03	3.2	9.4	2.1	2	23	528	549	527	549	0.96
10	12	0.0002	0.022	16.3	4.9	1	23	555	577	555	577	0.99
11	12	2.5e-06	0.00026	22.3	0.3	1	23	583	605	583	605	0.98
12	12	0.00079	0.085	14.4	0.9	1	23	611	634	611	634	0.98

Sequence Information

Coding Sequence: ATGGAGGACGTTCAGGTGTGCCGTATTTGTTTGAATATGGATGTGAAAATGCAGGACCTGTCGGCATACCCATTAGAATCTTATTTTGCATCATTTATGATAGAAAGTAAGCCTTTATATACAAACTTGCCACCTTATGCCTGCTATGAGTGTGCGGCTCTTgtgaaaaagttttatttattcagagaGAAGTGTCTGCAGAGCCAGAGCCTGCTGTGTGGAATCATTGATGATTGTGGAAAGCTAACCCGTCCAGCAATAAAAACAATCCCCCGAAGAAATCTCCTCGTAGTCACAAACGTCAATAACATCAATATAGTACAAGATATCACAACAGAATGTATCAACATAGAAAGACCTGAGTTTGTTGTAGAAGTTATCAAAAAGGAGAATCATGATGACATTGATATTCCTGATCACATCAGTCCTGATGATAGTTccagtgatgatgatgaagaatgCGAGGAGAATGATAAGAGGAAAATACATGAATTGGAGAAGGTGGAGATTTCTGTGAAGATGGATCTTGAGGAAGAGTCAGAGGGTATTGAGTTTCACGGCACAACAATTGATGAGCCTAAATTGCCCGCCAAGAAATCTCAGACAGCCAAGCCTAAAAAGCGAGTAAAGCAAAAGAGAACTTGTAGTACGGTTGCTAAGAAGAGTTCAGCAAAAGTCAAGAAGGATGACACAGAAGGCGACGACAATGCTGATGATTTGATCAATGTTATTACACTTTCGCTTGAAGACCAGTTGGAAGAAATGAACAAACGCAAACAGTCGTCCAATTACCTCGACTGTCCGTACAAATGCCACCAGTGCTATCGGGGCTTCAACAACACGCATGCCTGGAAACATCACCTCACCAAACACTCCCCGAATCTCGGCGACATAGAGTGCAAAATCTGCAAGTACAGGTTTAAAACGAAACGAAACCTTCAGAGGCACGCTCTAAACCACGGCAAGAGATATGTTTGCAATTTATGTCCGTACAACTCTAGTAACATAACTACTGTGAAGCAGCATCAAGGGTCACATAAGGGAGTCACGCATAAATGTAAATATTGTGATGAAGTTTTCAATGTAAGAACGACATATGTAAGTCATATGCGAATCAAACATCCATCAGAAAACATCTGCGGGTTTTGTGGGTACTCCTTCTATAGCAAGCAGGGGCTGGTCGTACATAAGAATATGATGCACAAGGATCTAGAAacAAAACAAGAGAACGCAGAAGAGGGTCCTTATTGTGAAGAATGTGACGTCAAGTTTATATCGATGGAAGCTTATAAAAGACACATGGTGATGTCTGTCAAGCACACTCGAACTACACACTCTATGAACGGGTGTCGTGTTTGCGGCGAGATATTCACGGACCCTGAGGAGTTACGTCTGCACAACCGTGAGGAGCATCCCAAGAAACAACCGAAGCACTACAATTACCAACGGAAGAGTCAAGTTAGAACCAAATGGCCTGCCAAGTGTCAACATTGTCCAGAAGAGTTTGCCACCCCTCGCTCGTACTGGAACCACTATCGACTCAAGCACCCTGACAAATACGAGCCGGTGCGCAAGAACTGCGTCTGTGATATATGTGGCAAGAGATATGCGTGCAACGCCGTCCTAGAACTGCACAAGCGCACCCACTTCGGCGAGCGCCCCTACAAGTGCTCCCAGTGCGACAAGGCCTGCTTCTCCGCACACGACCTGCGCGTGCACCAGCAGAAACACTCGGACACGAGACCCTTCCCCTGCAGCGTGTGCTCGCAAGCCTTCAAGCGGAAAGAAGCGCTGGAGAGACATTTGAAGATCCACTCCGGCGACAACCCATACAAATGTGAGATTTGCGGCGTAGCATTCGCCAAGTCTTGCACGAGAACGCTCCACGTGCGAACCGTGCATACTAaggagccgccgccgccgcgcaagCGACGGAACAAAGTCAACAAGTAA
Protein Sequence: MEDVQVCRICLNMDVKMQDLSAYPLESYFASFMIESKPLYTNLPPYACYECAALVKKFYLFREKCLQSQSLLCGIIDDCGKLTRPAIKTIPRRNLLVVTNVNNINIVQDITTECINIERPEFVVEVIKKENHDDIDIPDHISPDDSSSDDDEECEENDKRKIHELEKVEISVKMDLEEESEGIEFHGTTIDEPKLPAKKSQTAKPKKRVKQKRTCSTVAKKSSAKVKKDDTEGDDNADDLINVITLSLEDQLEEMNKRKQSSNYLDCPYKCHQCYRGFNNTHAWKHHLTKHSPNLGDIECKICKYRFKTKRNLQRHALNHGKRYVCNLCPYNSSNITTVKQHQGSHKGVTHKCKYCDEVFNVRTTYVSHMRIKHPSENICGFCGYSFYSKQGLVVHKNMMHKDLETKQENAEEGPYCEECDVKFISMEAYKRHMVMSVKHTRTTHSMNGCRVCGEIFTDPEELRLHNREEHPKKQPKHYNYQRKSQVRTKWPAKCQHCPEEFATPRSYWNHYRLKHPDKYEPVRKNCVCDICGKRYACNAVLELHKRTHFGERPYKCSQCDKACFSAHDLRVHQQKHSDTRPFPCSVCSQAFKRKEALERHLKIHSGDNPYKCEICGVAFAKSCTRTLHVRTVHTKEPPPPRKRRNKVNK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00906431;
90% Identity: iTF_00952932; iTF_00300502; iTF_00300501;
80% Identity: -