Hdys003086.2
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- PAXBP1
- Assembly
- GCA_905332915.1
- Location
- HG995288.1:4707851-4730057[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00014 1.4 9.6 0.0 6 41 524 559 519 568 0.90 2 7 0.041 3.9e+02 1.5 0.0 180 205 571 596 562 600 0.92 3 7 0.00012 1.2 9.8 0.0 6 42 590 626 585 650 0.90 4 7 0.048 4.6e+02 1.3 0.0 180 205 637 662 634 666 0.93 5 7 0.00013 1.3 9.7 0.0 6 41 656 691 651 705 0.90 6 7 3e-09 2.9e-05 24.9 0.1 6 60 722 777 717 799 0.77 7 7 2.3e-05 0.22 12.1 0.0 126 190 1080 1144 1068 1153 0.86
Sequence Information
- Coding Sequence
- ATGTCGTTGTTTCGAAAGCCGAAGAAGATACAGCGTCGTGTGTTCTGTGCCGATGATGACGAGGATGGAGAGCCAGAGGCTCCGCCGCCGCCAATTATTAGCCAAGAAAAGGAGAAAAAGGAGAAGGAACCCAAATCTTCCAAGAAAACTGCTCTGTTGAGTTTCGCCGACGAAGAAGAGGAAGATGTAGAGGTGTTCAAAGTCAAGAAGTCTTCTCAAAGTAAGAGATTAGCCAAAAAGCGTGAGAAGGAGAAGCAGAAGCGCGATGTGAGAACAGACAGTGATATTAACAAATATGACACTATTGTCATAGAGGAAAAGAACAACCACACTGAACTCAGCAACGATAAACCCAAGCCAAAGAAGAAGGTGTCGCTAGAGGGGCTGATCCTGTCCGGGCGGGAGGCGCTGGCGGCGGACGGCGCGGGCGACGTGTCGGACGGCAGCGCGCCCGACGACGAGGCCGACGAGGACGACAGGGGGTTCCACCGGTACCGCGCCGAGTCCGTGAGGGCCGCCATACTGGGCGCCCCGGGCCGCATTCCCGACGCCGCGCTCATCCACGCCGCCCGCAAGACCAGACAGCAGGCTCGCGAGTTGGGCGGCGGCGCAGATTACATTCCTGTCAAGTCCGAGTCCGCCCCGGGATCTCGGCTGGTACGGGACGACGGCTCCGGGGACGATGATGAGGAGGGCCGGATACTCGTCCGGGGACTGGACTTGCCCAGTGATAAGCCTAAACGAGGCACAGCAGCAGTATCCGAAGAAGAGCTGGACAGCGAGTCTGAGGAGTGGGTGGAACAGCAGCTGCAGAAGGCGCGGCCCGTCCTCGCGGAACTGACTGGTGAAGCCGCTATAGAAGTGAACCCGTTCTCGGTAGCGCTGCCGGCGCCCCAGACGTCGGCTCCGGAGCACCTGCGGCCTCTCTCGACTGGCTCGCAGCCCCCCGCCACTGCCAACGAGCTGGTGGACGCGTTGAAGAAGCGGTTAGGAGAGCTCCAAGTAGAGCGCTCGGCGACCGCAGACAGCCAGAAGGAGCTCCGGGAGAGGTTGCTGAGTTCGGCGAGGATACGGGAGAGCCGCGCGTCGCGCTGCGGACAGCTGGACGCGGCGTACCGGCGCGCGCAGGCCATCCGCGGCTATCTGACCGACCTCATCGAGTGCCTTGATGAGAAGATGCCACAATTGGAGGCGTTGGAAGCTCGCGCGCTGGCGCTGCACAAGCGTCGCTGCGAGTTCCTCGTGGAGCGGCGCCGCGCCGACCTGCGGGACCAGGCGCAGGACGTGCTCGCTCCTCCGGGGCGCGCCGCGAAGCCGGCCGACAGCGAAGAGAAGACGCGGCGCGCGGCCGAGCGCgaggggcggcggcgcgcgcggcggctgcggcgcgaggctgcggcccgcgccgccggcACCGCGCTGCCGCACCGCGACGGAGACTCCTCGGACGACGAGCTGCCTCCGCGGGAGCTGCACCACTACACACAGGAGAGAGACGCCATCCGGCAACAAGCGTCATCCCTGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGGCGGGCGTGTGCGGGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCGCTCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTATGTCAGGCACGAGGTAACTAATATTGTCAAGTGTCTGGCTCCGAACGTCCGTGTATCTAGTAAGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGGCGGGCGTGTGCGGGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCGCTCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTATGTCAGGCACGAGGTAACTAATATTGTCAAGTGTCTGGCTCCGAACGTCCGTGTATCTAGTAAGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGGCGGGCGTGTGCGGGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCGCTCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTATGTCAGGCACGAGGTAACTAATATTGTCAAGTGTCTGGCTCCGAACGTCCGTGTATCTAGTAAGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGGCGGGCGTGTGCGGGCGCCTGGCGCGCTGGCGGGCGCGCGCCGCCGCTCTCTACACCGACGCCTACGTCGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTATGTCAGGCACGAGCTCATATTATGGAACCCGCTAGCAGATGAGGACAACGAGGACTACGAGAAGATGGATTGGTACAGATGCCTGATGATGTACGGCGTGCGCACGGAGCGCTCCGCAGACGACTCTTCCGAGTCCGGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTATACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCACCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGGTAACATCATCATCTGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCAGCTACACTAGCGTGCGGGACGACCCTGACCTGCTGCTGGTGCCCAGCATCATCAGCAGGGTGGTGCTGCCCTGTCTCACAGAGCTGGTGTCGGTGGCGTGGGACCCGGTGAGCGTGCGCTCGTGCACGCGGCTGCGCTCGCTGCTGCTGCGCGCGGCGGGGCTGCCCACGTGCGCGGCCGCGCTGCGCCGCCTGGCCGCCGCCTTGCGCGCGAGGCTAGCTGCCACCCTAGGAGCTGATGTGTTCCTGCCTGCGCTGCCGCCACaAGTAATGGAGGGCCCGGGTGGCGCATTCTGGCGTCGTTGCTTGGGGGCGGGCGTGCGGCTGCTGCGCGCCACGCTGGCGCTCACCGGCCCGCCCGACCTGCTGCACGCCGACCCGCTCGTGCTGTCGCTTATCGAGAGCCTGTGCTGCGGCGCAGGCGCGGCGGGCGGGACGCacacggcgcgcgcggcggcggcgctggccGACACGCTGCCGCGCTCGGGCGCACTGCGCACGCGCGCGCTGCGCCGCCTGGCCGCGCTGGCCGCGCTGGCGCTCTCCAGGCTGGACAGCGACAACCCGCTGCACTTGTGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGEPEAPPPPIISQEKEKKEKEPKSSKKTALLSFADEEEEDVEVFKVKKSSQSKRLAKKREKEKQKRDVRTDSDINKYDTIVIEEKNNHTELSNDKPKPKKKVSLEGLILSGREALAADGAGDVSDGSAPDDEADEDDRGFHRYRAESVRAAILGAPGRIPDAALIHAARKTRQQARELGGGADYIPVKSESAPGSRLVRDDGSGDDDEEGRILVRGLDLPSDKPKRGTAAVSEEELDSESEEWVEQQLQKARPVLAELTGEAAIEVNPFSVALPAPQTSAPEHLRPLSTGSQPPATANELVDALKKRLGELQVERSATADSQKELRERLLSSARIRESRASRCGQLDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRAAKPADSEEKTRRAAEREGRRRARRLRREAAARAAGTALPHRDGDSSDDELPPRELHHYTQERDAIRQQASSLFSDALPAWRSVAGVCGRLARWRARAAALYTDAYVADCLPKLLAPYVRHEVTNIVKCLAPNVRVSSKFSDALPAWRSVAGVCGRLARWRARAAALYTDAYVADCLPKLLAPYVRHEVTNIVKCLAPNVRVSSKFSDALPAWRSVAGVCGRLARWRARAAALYTDAYVADCLPKLLAPYVRHEVTNIVKCLAPNVRVSSKFSDALPAWRSVAGVCGRLARWRARAAALYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYEKMDWYRCLMMYGVRTERSADDSSESGSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSTISRVVLPCLTGNIIIWSEGEPEPPPVSYTSVRDDPDLLLVPSIISRVVLPCLTELVSVAWDPVSVRSCTRLRSLLLRAAGLPTCAAALRRLAAALRARLAATLGADVFLPALPPQVMEGPGGAFWRRCLGAGVRLLRATLALTGPPDLLHADPLVLSLIESLCCGAGAAGGTHTARAAAALADTLPRSGALRTRALRRLAALAALALSRLDSDNPLHL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -