Basic Information

Insect: Hartigia nigra
Gene Symbol: stc
Assembly: GCA_031001745.1
Location: JARPRG010000582.1:410390-414814[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.8e+04 -4.4 1.6 15 19 542 546 541 546 0.81

2 15 0.19 1.7e+03 -0.8 0.2 4 10 575 581 574 581 0.94

3 15 1.5e-06 0.013 15.5 11.0 4 18 592 606 590 607 0.94

4 15 9.4e-05 0.85 9.7 15.5 1 18 643 660 643 661 0.91

5 15 0.47 4.2e+03 -2.1 1.0 1 5 670 674 670 679 0.72

6 15 6.2e-09 5.6e-05 23.1 12.8 1 19 699 717 699 717 0.97

7 15 0.35 3.2e+03 -1.7 3.8 5 12 746 753 746 753 0.91

8 15 1.9e-05 0.17 11.9 16.5 4 18 764 778 757 779 0.86

9 15 1.6 1.4e+04 -3.8 2.0 5 10 808 813 808 813 0.93

10 15 0.0072 65 3.7 10.7 1 11 819 829 819 841 0.88

11 15 7.1e-11 6.4e-07 29.3 14.0 1 19 846 864 846 864 0.98

12 15 1.4 1.3e+04 -3.7 0.5 6 10 893 897 892 898 0.70

13 15 2 1.8e+04 -4.8 7.4 10 19 911 921 900 921 0.82

14 15 9.2e-07 0.0083 16.1 14.2 1 16 957 972 957 983 0.84

15 15 7.6e-06 0.068 13.2 13.7 1 19 989 1008 989 1008 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.8e+04	-4.4	1.6	15	19	542	546	541	546	0.81
2	15	0.19	1.7e+03	-0.8	0.2	4	10	575	581	574	581	0.94
3	15	1.5e-06	0.013	15.5	11.0	4	18	592	606	590	607	0.94
4	15	9.4e-05	0.85	9.7	15.5	1	18	643	660	643	661	0.91
5	15	0.47	4.2e+03	-2.1	1.0	1	5	670	674	670	679	0.72
6	15	6.2e-09	5.6e-05	23.1	12.8	1	19	699	717	699	717	0.97
7	15	0.35	3.2e+03	-1.7	3.8	5	12	746	753	746	753	0.91
8	15	1.9e-05	0.17	11.9	16.5	4	18	764	778	757	779	0.86
9	15	1.6	1.4e+04	-3.8	2.0	5	10	808	813	808	813	0.93
10	15	0.0072	65	3.7	10.7	1	11	819	829	819	841	0.88
11	15	7.1e-11	6.4e-07	29.3	14.0	1	19	846	864	846	864	0.98
12	15	1.4	1.3e+04	-3.7	0.5	6	10	893	897	892	898	0.70
13	15	2	1.8e+04	-4.8	7.4	10	19	911	921	900	921	0.82
14	15	9.2e-07	0.0083	16.1	14.2	1	16	957	972	957	983	0.84
15	15	7.6e-06	0.068	13.2	13.7	1	19	989	1008	989	1008	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGATGGGTCATACTATGAACCCGATGATCCCAACTACTATCCATACTCCAATCGCAGTAATGTAGGCTCTGTGGATGAAACATGGAGCTACTATCcgggaaataatttttctcaatcaAGAGGTAACCTTTATACTGCAAATGGATCTGGTGCTTTCGATCAGAACAGAGCTATAGCCTTTCAACAAACTAGTGAAACGAACGTTCCACCAGTTCAACAAAATATAGTACCAATGCCTGTCTATCAAGATCAACCAATACCGTCTCTTATGGAAAATGTTAATCCGCAGTGTTTCTTCGAGAATAATAGAGTACAACCACAGCTTCCAccatttaattacaaaagtaGTAACTATGGAGGATGGAGTAAGGCCGATAATACTAACCCTAAATTCCCAGGGCAAGCAAAGAATTCATACCTAAACATAGCAGAGTATTCAAATCTGCATGTTACTGCTGGTGAATTTATACCAAACAGTGCAAAGCCAAGTTACTCAGAAGGACCAATTGTTAATGCAAATAGTGGAGGGAATCAAactaatattcaatgcaaagcTATAGAAACGCAACGTGGAACTTCTACCACCGCAGTAGAAGCAGGACCGTCAAATGTCTTTTTTGCAGATAATATAAACAAACGTCATGATAAGCggtttgataataaaaagagtaaCAATTACAGGCAACGTGAACCACAAGATCAACAACATAATCAGAATGGCTCCTATAGAAATTCTTATAAGAATCAAAATCCCAAAAGCTATGGCAAGtttcaaaatgaaagataCAACAATGGTAGACAATATTcggataataaatattcctctGGATGGAGGgataatgagagaaaaaagcagAATGTAGATCAATTGGCTTCTAATACCACCGATGGAGCTAGAGACAATTTTGGAACAGCGTCACATCcaagggatgaagaaaaacaatactCTAATGGAAAGTCAAACAAGAACGGTACTAAAGGCATGCCTTATAATGACTCCCTGTCTCATCAATATAAACAAGAGAATTCAAGACAACCTAACAAATCATCTAAGTACAATTATAACACTAGTAACGAGCCCAGTTCGTCTAGTCACAATACGGAGCAGCCTCAATCCTGGATGAAGAATGGAAAGAAGTATTTCAGCGATGATCGTTCTGAAAGATATCGTGACAGAAAAGAGCGTTACAGTGACAGGTACGATAGTGGTCacagagagaagagaaataattatcaggATTATGACGGGCACAAAAGTAATTATGATATGGATGAGAAGAGTGAAAGGAACAGAGATAAAGAGCGCAGCAAGAATGGTGCCCGAGAGAACAAAGATAGAGACAATGAAAGTTGGAGGTCTAGGAATGACATTAGCAGCCATAGTGGTACCCCAAAACGTAGTGGTAATAAGAAACACGATACAGATGACGATGCTAGTCAAAGGGAAAGGTTGACAGATCAATTAAATAGAGGACAACTCGAATGCTTAGTATGCTGTGATCGTATAAAACAAGCAGATCATGTTTGGTCGTGTTCCAATTGTTATCATGTGCTGCACTTAAAGTGCACTAAGAAATGGGCCAAATCATCGCAGAGTGaaaatggATGGCGCTGTCCGGCCTGTCAGAATGTAACATCTGTAATACCAGAAGAATATTACTGCTTCTGTGGAAAAGCAAAGACACCTGAATGGaatcgtcgcgacgtcgctCATTCCTGTGGCGACGTCTGTGCACGTATGCGAGCAAACACCAATTGTGTTCACAAATGTAATTTACTCTGTCATCCTGGTCCTTGTCCTCTGTGTATCGCTATGGTGACGAAGTACTGTGGTTGCGGAAGAACGTCTCAAACACTTAAGTGCAGCACCGCGACGCTTCTGCTCTGCGAGGCAACTTGCGATAAACTATTAAACTGCGAGAAGCACACCTGCAAGAAAAAGTGTCATCATGGTCGTTGCGAGAATTGCGATAAAACCATCCACCAAGAATGTTTCTGTGGTAAACATAGTCGTGAGGTCACATGCGACGTCGATGTTCCTCCTACGTATATATGCGGAAACGTTTGTGAGAAACTCTTGGACTGTAGTAATCACAAGTGCAAGGCTCTTTGTCATCCTGGTCCTTGCGAATCTTGTACGCTAAAACCGGAAGCTGTCACTCATTGCTGCTGTGGACAGACTCCTCTGGCGGAGCAAAGAAAAAGCTGTTTAGATGAGATACCAACCTGCGAGAAGATTTGCTGCAAGCGTCTCAAGTGTGGCCAACCGAGCCATCCTCATACATGTAAGTCAAAGTGCCACCAAGGCGATTGTCCGGAGTGCGAATTGATCACAAAGGTCAAGTGTCGCTGTGGTAACATGGACAAGGAAATTCCTTGCAAGGAACTAACGACAAAGGCTGACGATGCTCGCTGCGAGAAAAAGTGCACCAAAAAAAGATCCTGTGGCCGACATAAGTGCAATCAAATGTGCTGTATCGATATTGAGCATATCTGCCCGCTACCTTGCTCCAAAACATTAAGTTGCGGAAGGCACAAGTGTGAGCAGACTTGTCATAAAGGAAGGTGCCAACCTTGCTGGAGAAGTAGTTTCGATGAACTGTTCTGCGAATGTGGCGCTGCAGTTTTATATCCTCCAATTCCTTGTGGCACTAGACGTCCCGCCTGCGACAGACCTTGTTCACGTCAGCACGCATGCACGCACGAGGTGCTGCACAATTGTCACAGCGAAGCTACTTGTCCGCCATGCACTGTGCTCACTCAGAAATGGTGTTACGGTAAACACGAGTTGCGCAAAGCTGTGCCGTGTCacgtaaatgaaatatcgtgTGGTTTATCGTGCAACAAACCAATATCATGCGGACGACATAAATGCATTACACTTTGTCACACTGGACCTTGTGAAAAAACAGGACAAGTGTGCACGCAGCCATGTACTATACCTAGGGAATTATGTGGACACATTTGTGCTTCTCCTTGTCACGATGGAAAATGTCCTGATACGCCATGTAAAGAAATGGTGAAGGTTACCTGCCAGTGCGGCCATAGAAGCATGACTAGAGCTTGCGCCGAGAATTCACGTGAATTCCAAAGAATAGCTAGTGGTATACTTGCTAGTAAGATGGCAGATATGCAGCTTGGTCATTCGGTGGACTTGGAAGAAGTGTTTGGTCAAGGTGCGAAGAAGCAGAATCAGTTGAAAACTTTAGAGTGTAATGATGAGTGTAAGATTATCGAAAGGAACAGGAGATTGGCTCTGAGCTTGCAAATTGTCAATCCTGATCTTAGTGGCAAGCTTATGCCTCGTTATAGTGATCTTATGAAACACTGGGCCAAGAAGGATCCTTTCTTCTGTCAAATGGTCCATGACAAATTGACGGAACTGGTTCAGCTGGCTAAGACGTCTAAGCAAAAGTCAAGGAGTTACTCCTTTGACAGTATGAATCGAGATAAAAGGCACTTTGTACATGAATACTGCGAACAGTTCGGCTGCGAAAGTCATGCTTATGATCAGGAACCGAAGAGAAATGTTGTTGCTACTGCTGTGAAGGATAAGTGTTGGATGCCGAGTCTGAGTTTATTGGAATTAGTACAAAGGGAAAGTGGTCAAAGGAAGGTACCAGGACCTATGCTCAAAACTTCAAAGGCTAACAGCTCTCTGAGAAATGTTGAAGTTCTGCCCTTACCCGCTAAGAAAGGTCACAAACCATGGCCTATGCCATCGACTTCAAAGTCACCAGAAAATGTAATAGATTATTTCGACTATAAAGGTTAA
Protein Sequence: MATWDGSYYEPDDPNYYPYSNRSNVGSVDETWSYYPGNNFSQSRGNLYTANGSGAFDQNRAIAFQQTSETNVPPVQQNIVPMPVYQDQPIPSLMENVNPQCFFENNRVQPQLPPFNYKSSNYGGWSKADNTNPKFPGQAKNSYLNIAEYSNLHVTAGEFIPNSAKPSYSEGPIVNANSGGNQTNIQCKAIETQRGTSTTAVEAGPSNVFFADNINKRHDKRFDNKKSNNYRQREPQDQQHNQNGSYRNSYKNQNPKSYGKFQNERYNNGRQYSDNKYSSGWRDNERKKQNVDQLASNTTDGARDNFGTASHPRDEEKQYSNGKSNKNGTKGMPYNDSLSHQYKQENSRQPNKSSKYNYNTSNEPSSSSHNTEQPQSWMKNGKKYFSDDRSERYRDRKERYSDRYDSGHREKRNNYQDYDGHKSNYDMDEKSERNRDKERSKNGARENKDRDNESWRSRNDISSHSGTPKRSGNKKHDTDDDASQRERLTDQLNRGQLECLVCCDRIKQADHVWSCSNCYHVLHLKCTKKWAKSSQSENGWRCPACQNVTSVIPEEYYCFCGKAKTPEWNRRDVAHSCGDVCARMRANTNCVHKCNLLCHPGPCPLCIAMVTKYCGCGRTSQTLKCSTATLLLCEATCDKLLNCEKHTCKKKCHHGRCENCDKTIHQECFCGKHSREVTCDVDVPPTYICGNVCEKLLDCSNHKCKALCHPGPCESCTLKPEAVTHCCCGQTPLAEQRKSCLDEIPTCEKICCKRLKCGQPSHPHTCKSKCHQGDCPECELITKVKCRCGNMDKEIPCKELTTKADDARCEKKCTKKRSCGRHKCNQMCCIDIEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELFCECGAAVLYPPIPCGTRRPACDRPCSRQHACTHEVLHNCHSEATCPPCTVLTQKWCYGKHELRKAVPCHVNEISCGLSCNKPISCGRHKCITLCHTGPCEKTGQVCTQPCTIPRELCGHICASPCHDGKCPDTPCKEMVKVTCQCGHRSMTRACAENSREFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALSLQIVNPDLSGKLMPRYSDLMKHWAKKDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFDSMNRDKRHFVHEYCEQFGCESHAYDQEPKRNVVATAVKDKCWMPSLSLLELVQRESGQRKVPGPMLKTSKANSSLRNVEVLPLPAKKGHKPWPMPSTSKSPENVIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131248;
90% Identity: iTF_01395530;
80% Identity: -