Hnig012626.1
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- -
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000654.1:278431-282375[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-07 0.0038 16.5 0.7 44 130 48 133 45 172 0.56 2 3 1 1.8e+04 -17.0 30.4 462 486 180 204 151 212 0.52 3 3 3.4e-07 0.0061 15.8 0.1 340 381 244 285 219 295 0.81
Sequence Information
- Coding Sequence
- ATGCCAAAAGAAGTCGGCATGTTTAACTGGAAGATGATTTGCGCTGGCAGCTGGTCTCTCGTGTTTGTCGGGGATCTGCTGATTCATTCTCCTGGCAGAGCGGGGTCAGCcgtggaggaggagGTAAACCCCGACGCACAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGAAATTACTCGCTGGTGAAGCACTTCGTACTCGACGACTCGAAGAGGCTCATCGGGATCGAGGGTGTCCCTGCGAGTCCGGCGCCAGCTTCAGCCTCCGTCTTGAGGACAAGTTCAAGTTCAGGGACGACCACTTCGAGAAGCTCACCGTCCGCCCAAGAGTTTAAGAAACCCGGCGGTCCTCGCACCAGCTCCAGCGGCTCCAGTAGTCACGCTTCTCAACGCGGTGGCTTCGTGAAACCGGCTGACGGGAAACCACCCTACAGCGGCAGGGGAAGCTACTCGGGACAACCCGTGAAACACGGTGGCAGCAGTAACGACCATCGTAACCATGGGCTTCTTCCCGCCAAGGGTCCACCTCCTAATTCATCTTCCTCTACGTCCTCCGCGTCAAGTacctcctcttcgtccttttcatcctcctcgtcgtcctcgtcggcCAATCTCGGTGGGAGCGCAAACTTTGACGGCAATGCCGGAAGTACCGGGAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTACCTCTGGATAACGGGACGAGTACCCGGCACGGCGCTTCCGAAAATTCTGCCGACCTCGAGAACATCCTGAAAGAGATGATGATGCCGCCGACTCCACTGACGGCTATTGCCCAGACCCCCAGGAAAGAACTGGAGTCAAAGTTCACTTTCAACCCTGTACTCGCCAAGCTGACCGAAGTCCCACCTGGCGAAGCTGCGAAGCCTCGTAAGATTCTGCTGGAATCCTCTGGTGTCGCTGCTGCGCGCAGCGGCCAGCTCAATTTCGGTTATTTTGAGTCAACGAACGTATCGAAGTTTCGTATCGATTGCAAATGTCCACGGCATATTCGTATTGGCTTGCCTCTCTGGCTCCCTCGTGGTTCTCGGGCTGAGATAGCCTCACGAGAGAAGAAGGTGCGAGACAAGGTGGTTTCTATGGAAACGATTGAACCAACCAATCCGCCGCTCCAGCATCCGGATACCAAGCTGTGGAGCTCAGTGAATGACGACGACAATCTGGAGGCCGATTGA
- Protein Sequence
- MPKEVGMFNWKMICAGSWSLVFVGDLLIHSPGRAGSAVEEEVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASVLRTSSSSGTTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRNHGLLPAKGPPPNSSSSTSSASSTSSSSFSSSSSSSSANLGGSANFDGNAGSTGSRIHSVAGRLPRLPLDNGTSTRHGASENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPRKILLESSGVAAARSGQLNFGYFESTNVSKFRIDCKCPRHIRIGLPLWLPRGSRAEIASREKKVRDKVVSMETIEPTNPPLQHPDTKLWSSVNDDDNLEAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01199396;
- 90% Identity
- iTF_01199396;
- 80% Identity
- -