Hnig005315.1
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- Usf1
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000294.1:4102431-4103833[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.031 2.7e+02 1.8 0.0 11 39 138 167 137 175 0.80 2 2 7.2e-08 0.00065 19.8 0.4 17 48 220 251 217 254 0.93
Sequence Information
- Coding Sequence
- ATGGACATTTTGGAGCAGCACCTCGAGCAACCAGATGTCAGTGGGGTTTCCGCCAAGGTCGAGAACGGTGCTGGTATTGTCATCGAGGAAGCTGAGATTGTTGATTGCGACGGCGAAGCTGTTGGAGAAGATGGAATGCGTTATCAAGAGACTTTAGCATATAGGGTAGTACAAGTGAATGGTACTACTGCTGGTAACGAAATAGAATTACCAGTTGCTCAGCAGGCGAACAATACCGTTCAAGTTCTAACGTCTCCTATCAACGGTCAATTCTATGTGATTGGTAATGCAAATGATGTTTTTACGACTGCTCAAACGTCAAGATCACTCACCCCCAGAGGAACTACGCTTCAGATCGAAACACCACGCTGTACTACGACTGGATTAAAGAAGAGAGACGAAAGGAGAAGAGCTACGCACAATGAGGTTGAACGTCGTCGTCGTGATAAGATCAACAACTGGATAGCAAAACTGGGGAAGATAATTCCCGAGTGCAATTCCACAAATTCGAATTCTAATGGCAATGGCAGTAGTGGCGGCGAAGGAAAAGCAAACTACGAAACTCAGAGTAAAGGCGGTATCCTAGCAAAGGCTTGTGAATACATAGGTGAATTGCGTACAGCGAATCAAGGTTTGGGCCAGTGTTTAAGGGATAATGAAAAGTTACGGCAGGAGATAAACGCTCTGAAGCAGCTGATCGGTCAGCTGAAACGTGAGAATGCTCTGTTGAGATCGCAAGTATCGAATGGCACTACGAGTTCAGACGTAATACACTTGAGTCCTTAA
- Protein Sequence
- MDILEQHLEQPDVSGVSAKVENGAGIVIEEAEIVDCDGEAVGEDGMRYQETLAYRVVQVNGTTAGNEIELPVAQQANNTVQVLTSPINGQFYVIGNANDVFTTAQTSRSLTPRGTTLQIETPRCTTTGLKKRDERRRATHNEVERRRRDKINNWIAKLGKIIPECNSTNSNSNGNGSSGGEGKANYETQSKGGILAKACEYIGELRTANQGLGQCLRDNEKLRQEINALKQLIGQLKRENALLRSQVSNGTTSSDVIHLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119990;
- 90% Identity
- iTF_00294177;
- 80% Identity
- iTF_00770084;