Hsal002793.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- Hr39
- Assembly
- GCA_003227715.1
- Location
- NW:26710-47688[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 1.2e+04 -5.9 5.1 146 160 57 71 24 112 0.45 2 5 3 1.2e+04 -9.9 22.2 40 163 311 430 299 487 0.47 3 5 1 4e+03 -3.7 4.3 77 135 453 509 414 548 0.39 4 5 5.7e-08 0.00023 20.1 0.0 1 21 617 637 617 652 0.93 5 5 5.2e-69 2.1e-65 221.2 0.0 199 408 813 1017 794 1017 0.94
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCCGGGTCGGACGGCGGCTGGTGGCCGTCTTCCACGCAGACCTGGAAGTCCACCGCGGCCGTCGTCTCGTCCTCCGCATCGGCGCCGCCAGGCTCCGCGTCCGTCTCCGTCTCCTGCGCCGCCGCGTCCAGCTCGACGAGCTCCTCCACCTCGACCATCTCGTCCGCGACCTGTTGCCCCTCGTCCTGCATCGGAGTATCCTGCACGATGAGCCCGAGCCGCCCCACGGAGACGGAGAAAAACGTATCCATCACGACTATTAACGTGCCCCCCAGCCAAGAGATGCACGACGATAAGGGAGTATGTAAATATCTGGGAGGACAGAACGGCGTGACGGTGTCGGTGGTATCGACCTCCGTGCTGGGATGCGGCAACGCGAACGCCGTCCCGACGTCCGGGATTTGCGCGAGCAGCGGCCCGCACAACATCGGCATCGGGATCGGCATCCTCGCGGCGAACGCGGCCGACATCGACGACCCGGAGGATAGCGACGGCGAGATCAGCAAGATCGACTTCAGGGGCGTGAACCTGCGCTCGAAGAAGAAGCGCGACGTGTCCGGCAGCCAAAACGGCGACAAGATCGGCGACGGGGATGCgaacggcgacggtggcggatGTTGCGACGGCAACGACAACTCGCAGCAGCAACCCGAAAGACCCATGTCGTGGGAGGGGGAACTGTCGGACCAGGAAATGTCTTCGAATACAATTACCGATCAGGACGATCACAAGGAAATCTCTATGGAAGGGGTTCAAGTTTGCAGCACGAGTCCCGAACCTATGGAGCAGAAGTTTCAGATCAAGTCTGAGCCAGATTTCCGATCTAGCACGGGCTTCACAATAGGATCGTTCCACGACGTCGGGCTGCCAATGACGCATAGCCAACAGttgcagcagcaacagcagcagcagcagcagcagcagcagcagcaacagcagcaacaacagcagcgtACCATCGAGACCCTCGAGCAGACTCAGCAGAATGACCTGCCGCTGCTCGTTGGTAAACTGCTCGGTGGATACAATAGTTCGACACCTAATCACAGTCCCGTTCTAAATCCACGACATCATTTGACGAAACACAGCCACACTAGGTCACAGGTACCTTCGCCAGATTCGGCTATTCATTCCGCGTACAGCGTCTTCAGCTCGCCGACGCAGAGTCCTCATGCGGCGCGACATTCCGCCTTAGGTGCCGGCAGCCCGAtaccctcgtcgtcgttgtcgctcTCCCGGCACAGCTTCAACAATTCGACCTCCTCGCTGTCGCTCTCGCTGTCGCATTCTCTCTCGAGGAATAACTCCGATGCGTCCAGTAGCTGCTACAGCTACGGTTCACTCAGCCCGCCAACTCACTCGCCCGTCCAACAGCCACGTCATCCGCACTCACACTCGCAACATCATCAAGTCGCGCAAGGTAGTCCGTTACACTTGCCGGCGTCAGCAGCAGTCACGAGCCACCATTATTCGACCTCTTCTCTGCCGGGGTCCGAGCTATCCCCAGATGGACATCCTGTTGCGGAAGACCAGGAGGACTGCAGGATCCCGTCGGCGCCGTCCGGTATTTCCACCAGGCAGCAGCTGATAAACAGCCCATGTCCGATTTGTGGTGATAAGATAAGCGGCTTCCATTACGGTATCTTCTCGTGCGAATCGTGCAAGGGTTTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGTTGTCCGGTCACCGTGACCACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTGAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACGAGAGGTGGAAGGAGCACGTATCAGTGCACCTACACTTTACCGGCGAACCTCGTTGGGAGCCCTGCCGGCGGCATGACCAGCGAGAAACTCACAACGACTGGTAATTGCAGCCCGGCGCCGGCCGGCAGCGAGCACCATTACCCTATTCGACATCATTCGAATCATTCTCACAAGATGCAGGTGGTGCCGCAATTGTTGCAAGATATCATGGACGTGGAGCATCTCTGGCATTACAATGATAACGACCGGATAAGCGGCGGAGGGTCCGTCGGGAACATCGCGAGGAACTCCACCGCTAGTGACTCCAGTATGCTGCTGGGTGGAGCCGGAAGTGGGTCAGCGTCGACCGTCAGCGGACCTGCGGCCGGCATAGGCGCCGGTAACAGCGGAGGTGCGGTGGAATGTCCGTCGAACGACTTCGGCGCTAACGTCGACGCTAACAACAGAAGAGGAGACTCCACGACACCCTGCCCTACTGGCGTCTCGACCTCCGCCGGCCCGGGTGATCAACGCTCCACGAACGGTAACACCGCGAACAACAGCAATCCGCAGATCGGCAGTAATCCCAACAGCAATTCGACGCAACACTCAGACTCGCAAGTGTCCAATCTGTGTAACATTGCGGACCACAGGCTCTATAAGATAGTCAAGTGGTGCAAGAGCCTGCCGCTCTTCAAGAATATCTCCATTGATGATCAGATCTGCTTATTGATTAATTCCTGGTGCGAATTGCTGCTTTTCTCATGCTGCTTCCGCAGCATGGGCACCCCCGGTGAAATAAGGGTGTCTCTCGGCAAGTCGATCACTCTAGAGCAAGCGAGGCAGCTTGGTTTAGCGACCTGTATCGAGAGGATGCTCGCTTTCACCAACAATCTGCGAAGGCTTCGAGTGGATCAGTACGAATATGTGGCGATGAAGGTGATTGTGTTGCTGACCTCCGACACGAGCGAGTTAAAGGAGCCTGAGAAGGTCAGAGCTTCTCAGGAGAAGGCCCTTCAAGCACTGCAGCAATATACGATCGCGAGGTACCCGGAGATGCCCGCCAAGTTTGGCGAGCTGTTATTGAGAATTCCAGATCTACAGAGAACATGCCAAGTGGGTAAAGAATTGCTCAGTGAGAAACGCGCCGAAGGAGAAGGCAGCTCGTTTAACCTTCTGATGGAATTGTTGAGGGGAGATCACTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDGGWWPSSTQTWKSTAAVVSSSASAPPGSASVSVSCAAASSSTSSSTSTISSATCCPSSCIGVSCTMSPSRPTETEKNVSITTINVPPSQEMHDDKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICASSGPHNIGIGIGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGSQNGDKIGDGDANGDGGGCCDGNDNSQQQPERPMSWEGELSDQEMSSNTITDQDDHKEISMEGVQVCSTSPEPMEQKFQIKSEPDFRSSTGFTIGSFHDVGLPMTHSQQLQQQQQQQQQQQQQQQQQQQQRTIETLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQVAQGSPLHLPASAAVTSHHYSTSSLPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVTTRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKLTTTGNCSPAPAGSEHHYPIRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRISGGGSVGNIARNSTASDSSMLLGGAGSGSASTVSGPAAGIGAGNSGGAVECPSNDFGANVDANNRRGDSTTPCPTGVSTSAGPGDQRSTNGNTANNSNPQIGSNPNSNSTQHSDSQVSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMGTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSEKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_01087289;
- 80% Identity
- iTF_00769646;