Hsal010168.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- bab1
- Assembly
- GCA_003227715.1
- Location
- NW:1199223-1201731[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-06 0.0029 16.7 0.0 19 38 265 285 251 291 0.75 2 4 1.9e-11 2.2e-08 33.1 0.0 3 39 300 335 299 339 0.93 3 4 0.24 2.8e+02 0.7 0.0 25 34 373 382 356 387 0.85 4 4 4.5e-11 5.3e-08 31.9 0.0 4 39 413 448 410 453 0.93
Sequence Information
- Coding Sequence
- ATGACATGTGATGTCTGTTCTAAAATTCATCAAAGCCGTAGCCACGTGAAAACTAGCGCTTTTACAAGTAGAGTTGTCAATCTTACAAGATCACACGGCCACAGTCCTGTTCCGAGTTCCGTTCGTATACACAGCTGTCACGAAAAATTGGAAAGGAAACGAATTCGAAACGGCATGACAGACATCTCCGAACAGCACGAGGTCAACCAAGATGTTTCCTTCAAATGGGAGAATTATCAAAATCACTTGCCCGATGTTGTGCAGCAGCTCCTGCAGGAGGACTGTATGGTGGACGTTACTCTATGCGCAGCTGGTCACCGTATTCACGCGCATCGAATCGTATTGTGCGCCTGCAGCACCTTGTTTCAAGAAGTTCTTAGTCAAGTGACGGAGGAACATCCGACCATCATCCTCAGTGATGTATCTCTTCAGGATATAAAGTCGATTGTCGAATTTGCATATCATGGCGAGGTCCGAGTTCCTGTGGAAAATATTAGTAGCTTACTCGACACTGCACGGTCACTGAAAATAAGTGGGCTTATCGATATTGATAAACTTGAGGAAAATGATAGTACTGTAAATACAGAAGACAATAATATCGATGAACATATGATTGAAATGAAACAAAGAAGGTCTGATTCTCCAGAAAAAGATTTACAAGATAATCAGAATGAAACTAGTCTCGAAGATAGTATCTCGtctaagaaaagaaaacgccGCCGTGATATCAAGAAAGAATATAATGATATTATGTTGGCATCTGCAATTGAAGATTTAAAATTAGGACAAACATTAGTAGAAGCTGCCACTAGACACAATATACCACGTTCAACATTGTACATGCGAGCAAAAGCATTAGGTATTCATTTAAATGCATCGAGGAACGAATATCCTGCAGAATCTATGAATGCAGCAATAACTTCTGTGATGGGTGGTTCAAGTTTGCAGCATGCGTCAGATTTGTACAAAATACCCAAAACTGTGTTGTGGAGGCGTATACAAAAAGAGGGTCACCAAGTCGTGCGttctgaaataaaaagaacatatgatGTGGACATGAGGGAGGCTGCTGTGAAAGCCTTGGAAAGAGGGGAGAATctgacaaaagtttcattagaatttaaaATACCAAAGACTACATTATTTAGGGACAAGGCACGATTAGTAGACCAGGGCAAGTTGCCGTTATCATTTTGGAAGAAACGCAAAACTCGGAACGAAGAGTCAAAGAAATCACGATTAGAAGAAGCAGTGGCTGCTTGCAAGGGTGGTAAGATGTCACAAGCTACTGCATCTTTGACGTATCGTATTCCAAAAACGACGATATGGCGAAGGCTTCAGCAGGATGGCAAGAAAACTAAGAGATCGTCGAATGTAAAGAAGCAGCAACGATTAATGGACACATCGCAGCAGAATTCTGAAACGAGAGCACATGAAAACTCTGATTTTGCTTATTGTGAGGTTTCATCGGAGATTCCCATCACTTACATAGATGAGAACAACATACCCGAAGATTCCGTAATAATCTTAACGACGGAGGAGATGGAGGAACTGAATCTGGAAGAGGGGAGACAAATCATTGTAAATCCAGAACCTGGACAGGAGTACATTCCATGTTCAATAAATATCGGAGAAAACACAAATTATTCACAAGCTGAGAGTTAA
- Protein Sequence
- MTCDVCSKIHQSRSHVKTSAFTSRVVNLTRSHGHSPVPSSVRIHSCHEKLERKRIRNGMTDISEQHEVNQDVSFKWENYQNHLPDVVQQLLQEDCMVDVTLCAAGHRIHAHRIVLCACSTLFQEVLSQVTEEHPTIILSDVSLQDIKSIVEFAYHGEVRVPVENISSLLDTARSLKISGLIDIDKLEENDSTVNTEDNNIDEHMIEMKQRRSDSPEKDLQDNQNETSLEDSISSKKRKRRRDIKKEYNDIMLASAIEDLKLGQTLVEAATRHNIPRSTLYMRAKALGIHLNASRNEYPAESMNAAITSVMGGSSLQHASDLYKIPKTVLWRRIQKEGHQVVRSEIKRTYDVDMREAAVKALERGENLTKVSLEFKIPKTTLFRDKARLVDQGKLPLSFWKKRKTRNEESKKSRLEEAVAACKGGKMSQATASLTYRIPKTTIWRRLQQDGKKTKRSSNVKKQQRLMDTSQQNSETRAHENSDFAYCEVSSEIPITYIDENNIPEDSVIILTTEEMEELNLEEGRQIIVNPEPGQEYIPCSINIGENTNYSQAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00452500;
- 90% Identity
- iTF_00769803;
- 80% Identity
- iTF_00769803;