Dqua002488.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- bab1
- Assembly
- GCA_001313825.1
- Location
- NW:1157678-1160064[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.45 4.2e+02 -0.0 0.2 30 45 168 184 168 184 0.85 2 5 2.7e-07 0.00026 19.9 0.0 5 42 191 228 190 231 0.78 3 5 2.2e-11 2.1e-08 33.0 0.0 4 39 240 274 238 278 0.91 4 5 0.099 92 2.1 0.0 21 34 308 321 294 327 0.80 5 5 1.2e-11 1.1e-08 33.8 0.0 4 39 352 387 349 391 0.94
Sequence Information
- Coding Sequence
- ATGACAGATATCTCCGGGCAACATGAGGTCAACCAGAGCTATTGTTTCAAATGGAGCAATTACCAGAGCTACCTGTCCGATGTCGTGCAACAGCTCTTGGAGGAGGATTGCATGGTGGACGTCACTCTATGCGCAGCCGGCCACCGTATTCACGCGCATCGCATCGTATTGTGCGCCTGCAGCACCTTGTTCCAAGAAGTCCTTAGCCAAGTGACAGAGGATAACCCGACTATTATTCTGAGCGATATATCTCCTCAGGATATCAAGTCGATTATCGAATTTGCATATCATGGGGAGGTCCGAGTCCCCGTAGAAAATATCAGTAACTTACTTGAGACTGCACGCTCGTTGAAGATAAGCGGCCTTATTGACATCAATGGACTCGAGGAAAGTGAAAGTGCTGTAAACACAGAGGACAGCGATGAGCATGTGACTGAAATGGAGGAAAGTTCGGTTGTTCCTCCGGAGAAAGACCTGCAACAAGGACAAACCACTGCTGATAATAGCGTCTTgagtaagaaaagaaaacgccGCCGTGATCCGTCAAAGAGAGAATACAGTGAAGTCATGTTGGCATCTGCAATTGATGATTTAAGATTGGGACAAACGTTAGTAGAAGCTGCCACTAAACATAACATACCACGTTCTACATTGTACATGCGGGCAAAAACATTGGGTATTCATTTAAGTGCATCGAGGAACGAGTATCCCGCGGAATGTATGAATGCGGCAATAACTGCTGTGATGGGTGGTTCAAGCTTGCAGCATGCATCAGATTTATACAAAATACCCAAAACTGTATTGTGGAGGCGTATACAGAAAGAGGGTCATCAAATCTTGCGTTCTGAAATGAAGAGGTCCTACGGTTTAGATACGAGAGAGGCTGCTGTGAAAGCCTTGGAAAGAGGGGAGAATCTGACGAAAGTTGCATTAGAATTTAAAATACCAAAGACTACATTATTCAGAGACAAAGCACGATTAGTAGACCAAGGTAAATTGCCGTTGTCGTTTTGGAAGAAACGCAAGACTGAGGACGAGGAATTGAAGAAATCGCGATTGGAAGAAGCAGTGGCCGCTTGCAAGGGCGGCAAGATGTCGCAAGCCGCTGCGTCCATGACGTATCATATTCCAAAAACTACGATATGGCGAAGGCTTCAGCAGGACGGAAAGAAAACTGAGAGATCGTCGAACGTGAAGAAGCAACAACGACTAATCGAGACGTCGCAGCAGGATTCTGAAGCGAAAGCGCAAGAAGGCTCCGATTTTACCTATTGTGAGGTTTCGTCGGATATTCCTATCGCTTACATAGACGAGAACAGCTTACCCGAAGATTCCGTGATAATCTTGACGACGGAGGAAATGGAAGGACTGAATCTGGAGGAGGGCAGACAAATTATTGTAAATACAGGATCTGGAGAGGAGTACATTCCATGTTCAATAAGTATCGAGGATAATAACGCAAATTACTCGCAGACTGAGAGTTAA
- Protein Sequence
- MTDISGQHEVNQSYCFKWSNYQSYLSDVVQQLLEEDCMVDVTLCAAGHRIHAHRIVLCACSTLFQEVLSQVTEDNPTIILSDISPQDIKSIIEFAYHGEVRVPVENISNLLETARSLKISGLIDINGLEESESAVNTEDSDEHVTEMEESSVVPPEKDLQQGQTTADNSVLSKKRKRRRDPSKREYSEVMLASAIDDLRLGQTLVEAATKHNIPRSTLYMRAKTLGIHLSASRNEYPAECMNAAITAVMGGSSLQHASDLYKIPKTVLWRRIQKEGHQILRSEMKRSYGLDTREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDQGKLPLSFWKKRKTEDEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKTERSSNVKKQQRLIETSQQDSEAKAQEGSDFTYCEVSSDIPIAYIDENSLPEDSVIILTTEEMEGLNLEEGRQIIVNTGSGEEYIPCSISIEDNNANYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00452680; iTF_00769803; iTF_00769545;
- 90% Identity
- iTF_00452680;
- 80% Identity
- iTF_00452680;