Basic Information

Insect: Harpalus rufipes
Gene Symbol: Hivep3
Assembly: GCA_951394225.1
Location: OX596280.1:28581335-28588881[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00012 0.027 16.7 0.9 1 23 264 286 264 286 0.98

2 8 0.083 18 7.8 3.7 1 21 292 312 292 316 0.83

3 8 0.29 62 6.2 0.2 2 20 552 570 551 572 0.92

4 8 4.8e-06 0.001 21.2 2.1 1 23 1241 1263 1241 1263 0.99

5 8 2.5e-06 0.00054 22.1 4.2 1 23 1269 1293 1269 1293 0.92

6 8 8.7e-06 0.0019 20.4 1.0 3 23 1810 1830 1809 1830 0.97

7 8 0.0012 0.27 13.6 1.6 1 23 1836 1860 1836 1860 0.91

8 8 0.1 23 7.5 2.2 1 23 1878 1902 1878 1902 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00012	0.027	16.7	0.9	1	23	264	286	264	286	0.98
2	8	0.083	18	7.8	3.7	1	21	292	312	292	316	0.83
3	8	0.29	62	6.2	0.2	2	20	552	570	551	572	0.92
4	8	4.8e-06	0.001	21.2	2.1	1	23	1241	1263	1241	1263	0.99
5	8	2.5e-06	0.00054	22.1	4.2	1	23	1269	1293	1269	1293	0.92
6	8	8.7e-06	0.0019	20.4	1.0	3	23	1810	1830	1809	1830	0.97
7	8	0.0012	0.27	13.6	1.6	1	23	1836	1860	1836	1860	0.91
8	8	0.1	23	7.5	2.2	1	23	1878	1902	1878	1902	0.91

Sequence Information

Coding Sequence: ATGGAAATCTCTGGGAACAAGTATttgcacaaaaaatttaaaaaacaaacaagTTGTAGTCCTGTTTACAACGTAGAAGATAAGAATGATAACAGTGTATTGGTCGCCACCGCAATCACCAACTACGGTGTGAATTCTAGTGAAGAGGAATCTGttaatttcatgttatttaAGGACAATAAACCTATAGGAAGTGTGCCAAATTATAAAAGTACAAATTGTGACGGTAGTTTAAGTATTGAATCACAAGGTAGCGTTAGAAGTGTTGAGAGAACCGCGAACGTGAATGTTAAATTAGATAATCAGTCTTCCATATCAAACGTAGAAGTAAGTGTAAACATAGCGGCAAGAAACAGTGTAACAAAGAAATTACAACCAGAACTACAAGACTCGTTCACACAATATCGATCTTCTGACGATCCGCAAATTAGATCGCTAGACCACCAATCCATTTCGACATCAACCGTAACTAGCTGcatatcaaaaataattactacaacTACAAATAGTTTGATAAATCATGATTTCAAAGAAAACActgtaagaaataattttagttttgatACTAAACTTAATATTTCCGAACCAATTTCGAAAATTGAGAAGTCTTCCATTTTAGATACCGTATATTCTAAATCTAGTTTAATATCAGAAAAGTCAAATGCAGCCGGTATTAAATTAGATGTACAAGAACAACTTTCCATGGTCGGAAGAGCTGATTCCGATGGTATTAATTTCACAGAAAACATTCAAGAAAAGAAAAACTGCACAGAGTCCTCCGGAGGAAAATATGTTTGCACTTATTGTAATTTAGCATGTTCTAAGCCCAGTGTGTTACAAAAACATATTCGCGCCCATACAAATGAGAGACCATATCCATGTATTAGTTGCGGATTTAGTTTTAAAACAAGATCTAATTTATACAAGCATTGTAGATCTAGAACCCACGCAAATCGAGTTATGGGCAACAAACATGTACAAGCTGGTCAAATTGAAACAATAGATGTTGATGGTACTTCAGATAAAAATGAAGATCGGTCGGATTATACGGAAGAATCAATGGAAACCATAATTACCCCTGTAAatgagaaacaaatgaaaatatttggaaattctGTGCAGTTAAGTAAAGACGTTACGTTTGCACCCGACCAAAAGAATATTTGGGAACAAAAAACAAAACCATACAAACCACGTTTCCATACCGCAAAAATGTTTtacgaggaaaataaattaaaagaaaatgatgcAAAGTTAGATAACGTTTATATTGTCCCACCAAATCATTTGAAATCACCAATCCCGGAAGTTATAAAAAATAGAGTGGATGTTCAGGAACCACAAGCTAGGAGTAATCCTGATTTATTAAAACTTAGAATTAATGAACTTATAAACAAGAATAATTCTATCGTTAATTCTGATGAAGCTATGGTTATTAGAAGAAGAaatcttgaaaatattattgaaaataataatgaatatttaattcCTCATCATAATCCGTGGCATCATCAACAAACCGAATACAGAAATGATGAACCACTGAATTTGACCGCTAAAAACAGGAAACGCTGTTTAAGTGAAACAGacaattcaaataaaagtttaattaaagaattattgcTTAAAAATTTAAGTAGCGATCCTAATCTTCAATGCCAGTACTGTAAAATGATTTTTCAAACAGTTACAGAATTAgaaatgcataaaataaaatattgtaacgcgAAACATAGTAATATAAGATACGCAAGAAGTAGTTCTGTCAATGTGGCCTCTATATTAACTGGAAATAAAAATGCTTTTGATAATATTCCTCATATGCAACATACaacgtttccattaaaatcGCCAGgcccatttttgggtaaaacTAGGTTAATTGACAGTGAAAAAGTAGGTGAAAAATATAGAACATTTTCTTTCGATGATAATGTCATTATGCATCACAGTCAGTCCGATTCACCTAGttatagtaaatatattatGCATTCACCTGTTGGTACTTATCCTTTGTCTCcacaaataaaaaagaatcctATTAAACTATTTGGCGGAGAAGTTAAAATTACACAAACTTCGGGAGAAACAAGAAGTTTTAAAATAGAGTcagaaagtataaataaaatagaagaacCACATAATTTCATGGAATTTAGTGGAAATTTAAGCGAAAATCTAGTTATAAAATCAACTTTACAGTCTGGAGGAACAGtactacaaaataaaacaaactacAGTCCAAAAATGGACAGCTTACCTTCTCCTAATATAATTAGAGTGTATGAGAATTCAGATATGCCTACAgccaatttaaatttatcaatattaaatgataaaaccAAATTTACGTATGATAAGATCTCACAACCAAATATTAGACAAAATGATAAACTTTTAATTGTtgcaaataatgaaatgttGAAGAGAAGATTTCCGGTAAGagataaaattgaaacaagCTCTTCTGAGAACATACGTAATTCCGATATTCGAAATCCTGACACTAAATCTGAAAGTGAaaaagataaagaattatacaaATCTAATTTAATGGACTTTGGTCAAAAAGCAGTGAAACTCTTAGCTCCTAATTTGAAACCACCAAACTTAACTATACCAGGTATACCAATACCTTCTGCACCTAGTGATAAAATCATGTCTTCTCCAATTACTCTTGCGcctttagaaataaatactagTACAATGGATAGAGATGCTTTAATAGACAGGCAACACCAAGAAAATCTCAATTTTGCTAAAAAACAGATTTCATTACAACAACGAATGGCAGAAGTATCTCAACCACAAACTGTTTTGAATCCAATGAATATTGTAgtgaatggaaaaataattcgTTACGTTCCTGGAATTCCTGGACCAATTCTTGCGGATACTCCAGCAGAAATACTATCTCCTGGCAGATTATCcgaaaataataaactgttgaaGTCTCCCCGACTTGTAGAAGAATCCCGAGAGACTAAAGATACACCCGAAACTCCAactgtattttcaataaacaatagTCAGATTGAACGAAGAACACCAACCATAATTGTAGATCAACATGACAGCAAATTTTCAGAACCGAAGGTACAATCTGCAGAAAGAATAAATAACTTACCTAGTAGAGTTTCAGAAAGCAAAATTAGTTCAACTATAACAGCTACAAGTCCGGAAAAAACATTTAAGGAAGAATCGAAAAAATTCGTTCGTCCTACTAGTTTGGCATTAAAGCCAAATTCTGTAGCTTTTAAAAGCCATCATGGGTTAACTCCCACGATGTTTAATCAAGCTTTAATCAGCCCTGATACGCCAAGAGTCGCCAAGAAATATTGTCAACAATATCTAAATGGAAATTACTTCAGTTACCTAGGGTTGAAAAGTTCTACAAAATCAGTTTATTGTACATTAAATAAAACCCAACCATTTTATGTGAAGCATTTCAAGAAATTAAGCATGTATTCTGAATGGAGACAACAAGAAAGTAAACTGGATAGTTTGAGTGTTAGTGCTTATGATTCTAGACAAAGGCAGCAAAAATATACGATGGCAGGACAAGCGAAAGCAGATTTAATCGCCCATTCAAGTTACaagtttgTGAAATCCGAAACACCAATGACGAAAGacgaaaatacaaataaaacttcTTCGCTTCTTGGTGGTTATGAATCTAATGAAGACTACACATATATTAGGGGTAGAggtCGAGGTCGTTATGTTTGTGATCAATGTGGAATTAGATGCAAAAAACCATCTATGTTAAAGAAACATATTAGGACACATTCCGATGACCGACCTTACACTTGCGAACATTGTAACTTCAGcTTTAAAACTAAAGGAAAtctaacaaaacatatgaaaagcAAAGCACATTCTAAGAAATATGCAGCTACTAGCAGTACATCGACTCAAAATAGTATAACTACAAGTTCGGAATCTGAAGAAAGCGACGCTGAAAGTAGTGatgaATCAACTAGACTTCAAGAGCATGAAGCAGCTCGCTGTCTTCTTTCATTATCTCAAAAAACTACTTCAACTCAACCTTTAAACACCCATCTGGAATCGACAAATTCATGTTCTTCAGCAGCGTCAGTAACTTCAGTGACGTTTAACTTATCAGATTTTTCCAACTTTTTAAAAGATGATAAATTTTTGAAGAATTCGGAACAAATAAGTCAAGTTACTAACACAAATTTTGCTAAAAACAAGATCTTGGATGAAGTACCGGTTAGTTTCAACGCTACCAAACACTTAACCGAAGTGTTAGACGTTACTGCCTGTACTAGTCAAGATTCTACAAATGTTAGTCAATATTTGGGAAAATCTTCTACAATAAGACCTTTAACGTATCCCTATCAGCAAACACAACTTGATTTAGATTCGAAAAGTAATGAACATACAGACAACATTCCAAAAATACCAGTGCCTCATGAAAGTAAtcacagaaatattattaaatcccTAGATAGCAAAGTTGTTATTTTAAGAGAACCTCCTCAGGATCAGAAATATCCTCACATAAAGGTGAAGAGTATAGAAGAAGCTAAATATGTTCCAAATAGTTCAAAACTTAGCTTACCAATTGTAAGACAAGATTTTTCACTGCAAAATGTCGAAGGAAACCTTCCAGCAAATATAGtatttagaaaaagaaaattatcttcTTCCAATGCAGTTCATAGCAAAGTACAACGAAATGAGCCAATGGAATCCATTTCAAAAGCGACAGCAGTAGATCTTTCTATGCCGATTATACAGGATTCGCCGGTTTTAGATTTATCACCTGCAACAGTCAATGGAGAAGCATCACCGTTTAATGATGCTTCAAATAATAgtgataattttaataataaattaaatatttctattcCTAAAAGAACATTACTGTTAAATCATGAAAACCAAGTGAATCCACTTAGAACAGTTGAAGTGATATCAGATACACCAGTACTATACAACgttgtaaataatgaaagaatTAGCGAACcgttaattatttataaccaGGTACAAAAACCACGTCATAATAGTTTTTCCGAATCAAGTAGTAGCGAAACATTTTCACAAAACAGCGATACAAATGATCGAATAATAGGAAAAACAACCGACAAACCTGATACCTTGTTGCCATCTGATAAAGAaatgtacaaattcaatatgCATGCCGAAATTGCACGAAGTCAGTCCAAAACTCCAGAATACGGAGAGCAGGACCAATCAGCTATGCAAACTCTTGCAGAAATTGCCATAAAGCAAGTAAAGTTAGAGAAGAATATACTCGCCAAAAATGTTGCTTCAGAATATTTAAAGTTGGCATTAAATAATGAAGGGAGTAATCCAGatggaaatattaaaaagtatgcTACTAGTACAAAAGAATCTGTTAGTGACTTGATGGTTAAACCAGAAGAAAgcaaaaattgtacaatttgttCGAAGAATTTCAGCAAACCATCACAGTTAAgGTTACATATGAATATTCATTACTTAGAACGACCATTCCGCTGTGAGCCATGTTCAACTAGTTTTAGAACCAGAGGTCACTTACAAAAGCATGAAAGAAGTGCTGGTCATCATAATAAGttgTCATCGTCACCCGCGTTATCATCGCAAGAACCACGGCCTTTCAAATGTATCGATTGTAACGTTGCATTTAGGATACACGGACATTTAGCGAAACATTTAAGATCGAAAATGCACATAATGAAACTTGAATGTTTAGCAAAAATTCCGTTTGGCCTATATGCCGAGTTAGAACGAGCGAATAGTTTACTAACAGAAATTAATACAACGGACGGGGATTTATGTTTAGAAAGTTTGAAgattttggcgAGGAAATTATTCAGTAACGATCCAAATAAGTTGGACCAGTTAGGTAATTTACCTGATACTAGAGACAgctag
Protein Sequence: MEISGNKYLHKKFKKQTSCSPVYNVEDKNDNSVLVATAITNYGVNSSEEESVNFMLFKDNKPIGSVPNYKSTNCDGSLSIESQGSVRSVERTANVNVKLDNQSSISNVEVSVNIAARNSVTKKLQPELQDSFTQYRSSDDPQIRSLDHQSISTSTVTSCISKIITTTTNSLINHDFKENTVRNNFSFDTKLNISEPISKIEKSSILDTVYSKSSLISEKSNAAGIKLDVQEQLSMVGRADSDGINFTENIQEKKNCTESSGGKYVCTYCNLACSKPSVLQKHIRAHTNERPYPCISCGFSFKTRSNLYKHCRSRTHANRVMGNKHVQAGQIETIDVDGTSDKNEDRSDYTEESMETIITPVNEKQMKIFGNSVQLSKDVTFAPDQKNIWEQKTKPYKPRFHTAKMFYEENKLKENDAKLDNVYIVPPNHLKSPIPEVIKNRVDVQEPQARSNPDLLKLRINELINKNNSIVNSDEAMVIRRRNLENIIENNNEYLIPHHNPWHHQQTEYRNDEPLNLTAKNRKRCLSETDNSNKSLIKELLLKNLSSDPNLQCQYCKMIFQTVTELEMHKIKYCNAKHSNIRYARSSSVNVASILTGNKNAFDNIPHMQHTTFPLKSPGPFLGKTRLIDSEKVGEKYRTFSFDDNVIMHHSQSDSPSYSKYIMHSPVGTYPLSPQIKKNPIKLFGGEVKITQTSGETRSFKIESESINKIEEPHNFMEFSGNLSENLVIKSTLQSGGTVLQNKTNYSPKMDSLPSPNIIRVYENSDMPTANLNLSILNDKTKFTYDKISQPNIRQNDKLLIVANNEMLKRRFPVRDKIETSSSENIRNSDIRNPDTKSESEKDKELYKSNLMDFGQKAVKLLAPNLKPPNLTIPGIPIPSAPSDKIMSSPITLAPLEINTSTMDRDALIDRQHQENLNFAKKQISLQQRMAEVSQPQTVLNPMNIVVNGKIIRYVPGIPGPILADTPAEILSPGRLSENNKLLKSPRLVEESRETKDTPETPTVFSINNSQIERRTPTIIVDQHDSKFSEPKVQSAERINNLPSRVSESKISSTITATSPEKTFKEESKKFVRPTSLALKPNSVAFKSHHGLTPTMFNQALISPDTPRVAKKYCQQYLNGNYFSYLGLKSSTKSVYCTLNKTQPFYVKHFKKLSMYSEWRQQESKLDSLSVSAYDSRQRQQKYTMAGQAKADLIAHSSYKFVKSETPMTKDENTNKTSSLLGGYESNEDYTYIRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHSDDRPYTCEHCNFSFKTKGNLTKHMKSKAHSKKYAATSSTSTQNSITTSSESEESDAESSDESTRLQEHEAARCLLSLSQKTTSTQPLNTHLESTNSCSSAASVTSVTFNLSDFSNFLKDDKFLKNSEQISQVTNTNFAKNKILDEVPVSFNATKHLTEVLDVTACTSQDSTNVSQYLGKSSTIRPLTYPYQQTQLDLDSKSNEHTDNIPKIPVPHESNHRNIIKSLDSKVVILREPPQDQKYPHIKVKSIEEAKYVPNSSKLSLPIVRQDFSLQNVEGNLPANIVFRKRKLSSSNAVHSKVQRNEPMESISKATAVDLSMPIIQDSPVLDLSPATVNGEASPFNDASNNSDNFNNKLNISIPKRTLLLNHENQVNPLRTVEVISDTPVLYNVVNNERISEPLIIYNQVQKPRHNSFSESSSSETFSQNSDTNDRIIGKTTDKPDTLLPSDKEMYKFNMHAEIARSQSKTPEYGEQDQSAMQTLAEIAIKQVKLEKNILAKNVASEYLKLALNNEGSNPDGNIKKYATSTKESVSDLMVKPEESKNCTICSKNFSKPSQLRLHMNIHYLERPFRCEPCSTSFRTRGHLQKHERSAGHHNKLSSSPALSSQEPRPFKCIDCNVAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERANSLLTEINTTDGDLCLESLKILARKLFSNDPNKLDQLGNLPDTRDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00767574;
90% Identity: iTF_01105084;
80% Identity: -