Hruf055896.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- ibtk
- Assembly
- GCA_951394225.1
- Location
- OX596289.1:11062329-11072895[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-09 1.3e-06 30.4 0.0 10 78 565 628 556 647 0.89 2 4 9.3 7.3e+03 -1.0 0.0 86 105 691 710 678 714 0.80 3 4 1.7e-09 1.3e-06 30.4 0.2 10 80 741 808 735 838 0.82 4 4 0.018 14 7.8 0.1 77 109 840 872 825 873 0.88
Sequence Information
- Coding Sequence
- atgtcTAAGTTACAATTAGAACGTGAATGTACAGAAAAGTGCAAATCTGCCCAACATGGGAATCTTATAGCTTCGGTTCTAACTAAACGAGGAGTATCAGACGAAGAATTATGTGCTTATATTCGCTGGTTATGCTGTACATCAGGTCACATTTGTGATTCTTTGGGACGCACGGCGCTGCATATTGCAGCCTCTTGCGGAAGAACAAAGCTTGTTCGATGGCTTATACGAAACAGAGGGGCTCTAATTAATGCTAAAGATTTGGAGTCAGGGTATACTGCCTTACACAGAAGTATTTTTTATGGAAAAATTAATGTGGCTGTGACTCTTATTCAACTTGGTGCCAATATTAATTTAACGGACCATAATGATTTAACACCACTGGAACATGCAATGAAAGATCGAATGAGTGAGAAATATTCCGCTTATGAACTTAAGTATAACAATCAAGTGTATGTCTGGGgtacaaatacaaattataccTTAGGAACGGGATCGCAGCATTCAAGACAACTTCCAGAATTAAACGATGCTTTCCTTAAGAAATTTTCAGATTTGTCTGTTCGCCAAATTTGCTTGGATAAATTTCACTGCGTAATTTTAGCAGAAGTAGAGTGTTTAACTTCCGTTTATTCTTGTGGACATGGACAAGGAGGTAGATTGGGATTAAATACTGAGAAAACAGTTTTGGTTCCACAAGAAATAAATATGCCACGTGTCAAGGGTGATTGTCCTTTCATATCTCAAATTAGTACTGCCAGAGACCATACATTGTTTCTGTATAACTCAGGAGTGGTAATGACATGCGGTTTAAATACGCACCACGTCTTAGGAATTAAACCTCCTCCAAAGCAACTTCTTGTGCCAACTCAAGTACCCATGCGCAATAACGTTAAAGGAATTTGCGCTGGTCGCTTCCATTCCGTAGCATGGAGCCCTAATTTTGTTTGTACCTGGGGCTTGCATGCGGGTCAACTAGGACATCTACAGTGTAATAATACAACGGTCGTAAGTCCAAAACAAGTTGCTCATTTTACTTCCCAGGATACTATAGTTGCTGTGGCAGCTAGCGATGGCGCTACAGTTGTTGCTACCAAAAAGGGAGATGTTTTTGCCCTTCATGAGTATCAATGCCGAAAAATCGCTTCCAGGcaattaattattgagaaaATAGTGGTAGTTGGTGGACATCTCAATCCAAAAGTAAGCAGTGCTATTTTAACAGAAAAAGGCGGAAATGAGTTAAAAGTTCTCGTTTTACTAAAAACTGGCAATTTGCTACTTTGGCAAGAATCTTTTCCACAATTAAGTCgatgtatttacaatttaaatcgTCCATTAATAGCAGTTGACGCAGTTTTAAGCCCTACCGAAGTGTTATTTGTTACAAATGATGGTGAAGCATTTAAAGGCGATTTCCGCACAAGAAAGAAAAAGTTATTGGAGCCTAATCACGAGAAGAAATCTGCTTTTCACGAATTTTTGGATAAAGATGATTGCCAAATTGTTAATGTTACGAAGATTCCGCATATCCATAGGGCCGTAAGAATTGAGTGTGACTATAAAGGAAGAAATTTTGCCGTGATACAAaatGCTCCACAAGTCTACACAATTGACGGCGAAAAATGGTCTAGAAGTACAATAgaacaagatatgttaaatgtattaaataatgCAGACATAACCGACAATATTCACGACGGTATTTTTAAAGTTTCGGGGCAACTATTTCctgttcataaatatttcatcggTTTACACAGCCAGCCACTTCATTCTTTACTTGAAGCCAGTAATGCTGATGAGCCAGTTGAAATTCCTAATATTGATCCGTttgttttcaaagaaatattaattttcatttatacagATACTTGCAATTTTATAAAACCTGGTAAATTGACTACTGAAGTTTATCGTTTTTGTACGAAAAATAAACAagacaataatgaaaatttagaaaacgtaGAACTAGATGAAAATACATCAGCAtacgaatattataataaaaagcaGAAAAAGAATGTGAAgaataatacaattgaaaagtTACTTAATCCACTTGTAATTATTCAGCAAGCAGCTAAAAGATTCGGAATAAAAtcacttattaaaaaaataaatgaactgaATTACAATAATGGATCGCTACGCCCAAAACATCATGATTATTATTTCACTTGCAATCATTTGGAATTTTATCGTTACAAATTTCCAAATCTTTACGACGTTGTACTGAAATCCGAAAATGGCGAAATTCACGCACACAAATGCATTTTATCTAGATTGGAATATTTTAGCAATTTATTTGCTGTGAGATGGAACGAAACTTCTGCTAAAATTGTTGTAACTATACCAACTTCGTTTAAAGTTTTAGAAACAGTTGTGGAATTTCTATATAACGATAATATGATACGACATACCAACGATTTTGATTTTCTCTGTAAACTTATAGTTATTTGTGatcaattatttattgaattgttgAAAGAATATAGTGAAAAAAATTTAAGTACAATGATTACTTTGAGAAATGTTGCTCAGTTACTACAATTCGCGCGCACTTACAATTCATATGACTTAAAATATAATTGCGAacgttttattgaaaaaaatttagCTGCTATTTTGGAATCCAGGAGCTTAGAAATATTAGATGATGCAGCGCTGGATGATTTAACTAAACTTATAAGTTACAAAGAATATTTATCTAAAAGAGTTATTACTCCATTTTCTGATGCTCCTTCCGATGAAGAAGTAAAAAGTATTTACGAATCATACCCTGTTAACATTGAAGACTCTGATCAAGAGAGTTTCGAAAAGAAAACACCTAAACTTAACGCAAGAAAAAAAGTAAGAACTCGACGATCAAGCGAAAATAATCGTAGTAAAACATTCAGCGAGTCAAATTTGGAcaattcatttgaaaataattgcAGCTCCAGTGAAGTATTTGAAGATGAAATTGAaactaaagataaaattgaacCTAAATATGAAATCAAACCAGATGAAAAATggacaaaaatattaacagaAAAGGAAAAACATCAAAAAATTGTTCAAAGCCGATTAAAAGCTATTTCTTTAGCAAAAGAGGAAATTGAATCAGAAACAGTAAATCATGACGATACTTTCACTAAACTGGTATCTCAACCAAAGATCATACCTAAAAATGAATCTCAAAACTTTACAAAATCTCCATTTACAAGTCCAATTCTCATGGGAACTCCTCCACAAAGCCCTAACAACTCATTTTCGTGCGATATAATCAAATCTCCAACAATGAGTGATGTTCCAATCCAAAAAGCTCAAAAACTATCACAAAAACAACGCAAAAAACTAGCAACGGAATTGTCAGTATCTTCCATGGCACAAGATTTGGAAAAGATCAACAAAAAACCGTCTTGGAACACACTAGTCTGGTCGAAAGACAATAACTCTTTTTCAGATATTTTAAACAACGAGAAAAAAGAAATTCCCGATTTAAATGGGAGTCCAAGTCCCAGAAATCCGTGGCAAAAAACTGAGGTGTCCTCCCCCGTTGCAAGTCCAGATACAAAtcagaattttaaagatattgttGCTGATGAAAAGAAGTTGAAAGAAAACTGGAATAAAATGAGGGATCGGCCTTTAATTTGTATTCAGATGGAAGATAAAGCTATAAATGATTTAGAacgtttttataatattgacCAAGTTACTGATGAGTATATAACAATTCACAAAGTAGAAAAAGGTGCTTTTGCTGTTCCGATGTGGGTTCAATCTAATTCAAAACATTAA
- Protein Sequence
- MSKLQLERECTEKCKSAQHGNLIASVLTKRGVSDEELCAYIRWLCCTSGHICDSLGRTALHIAASCGRTKLVRWLIRNRGALINAKDLESGYTALHRSIFYGKINVAVTLIQLGANINLTDHNDLTPLEHAMKDRMSEKYSAYELKYNNQVYVWGTNTNYTLGTGSQHSRQLPELNDAFLKKFSDLSVRQICLDKFHCVILAEVECLTSVYSCGHGQGGRLGLNTEKTVLVPQEINMPRVKGDCPFISQISTARDHTLFLYNSGVVMTCGLNTHHVLGIKPPPKQLLVPTQVPMRNNVKGICAGRFHSVAWSPNFVCTWGLHAGQLGHLQCNNTTVVSPKQVAHFTSQDTIVAVAASDGATVVATKKGDVFALHEYQCRKIASRQLIIEKIVVVGGHLNPKVSSAILTEKGGNELKVLVLLKTGNLLLWQESFPQLSRCIYNLNRPLIAVDAVLSPTEVLFVTNDGEAFKGDFRTRKKKLLEPNHEKKSAFHEFLDKDDCQIVNVTKIPHIHRAVRIECDYKGRNFAVIQNAPQVYTIDGEKWSRSTIEQDMLNVLNNADITDNIHDGIFKVSGQLFPVHKYFIGLHSQPLHSLLEASNADEPVEIPNIDPFVFKEILIFIYTDTCNFIKPGKLTTEVYRFCTKNKQDNNENLENVELDENTSAYEYYNKKQKKNVKNNTIEKLLNPLVIIQQAAKRFGIKSLIKKINELNYNNGSLRPKHHDYYFTCNHLEFYRYKFPNLYDVVLKSENGEIHAHKCILSRLEYFSNLFAVRWNETSAKIVVTIPTSFKVLETVVEFLYNDNMIRHTNDFDFLCKLIVICDQLFIELLKEYSEKNLSTMITLRNVAQLLQFARTYNSYDLKYNCERFIEKNLAAILESRSLEILDDAALDDLTKLISYKEYLSKRVITPFSDAPSDEEVKSIYESYPVNIEDSDQESFEKKTPKLNARKKVRTRRSSENNRSKTFSESNLDNSFENNCSSSEVFEDEIETKDKIEPKYEIKPDEKWTKILTEKEKHQKIVQSRLKAISLAKEEIESETVNHDDTFTKLVSQPKIIPKNESQNFTKSPFTSPILMGTPPQSPNNSFSCDIIKSPTMSDVPIQKAQKLSQKQRKKLATELSVSSMAQDLEKINKKPSWNTLVWSKDNNSFSDILNNEKKEIPDLNGSPSPRNPWQKTEVSSPVASPDTNQNFKDIVADEKKLKENWNKMRDRPLICIQMEDKAINDLERFYNIDQVTDEYITIHKVEKGAFAVPMWVQSNSKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104881;
- 90% Identity
- -
- 80% Identity
- -