Basic Information

Insect: Harpalus rufipes
Gene Symbol: SNAPC4
Assembly: GCA_951394225.1
Location: OX596277.1:2652336-2654928[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.3 1.4e+04 -1.8 0.1 32 45 84 97 74 97 0.75

2 7 2.9 9.4e+03 -1.3 0.0 1 16 147 162 147 163 0.78

3 7 0.017 56 5.8 0.1 7 43 221 261 220 264 0.86

4 7 6e-08 0.00019 23.3 0.0 1 43 270 314 270 317 0.93

5 7 0.011 37 6.4 0.1 2 42 324 368 323 371 0.92

6 7 1.4e-05 0.046 15.7 0.0 1 41 378 418 378 422 0.94

7 7 3.2e-07 0.001 21.0 0.3 3 44 429 469 427 471 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.3	1.4e+04	-1.8	0.1	32	45	84	97	74	97	0.75
2	7	2.9	9.4e+03	-1.3	0.0	1	16	147	162	147	163	0.78
3	7	0.017	56	5.8	0.1	7	43	221	261	220	264	0.86
4	7	6e-08	0.00019	23.3	0.0	1	43	270	314	270	317	0.93
5	7	0.011	37	6.4	0.1	2	42	324	368	323	371	0.92
6	7	1.4e-05	0.046	15.7	0.0	1	41	378	418	378	422	0.94
7	7	3.2e-07	0.001	21.0	0.3	3	44	429	469	427	471	0.93

Sequence Information

Coding Sequence: ATGTGCGCCTCATACgacgatattttaaaattatccaACGTCTTAAAAGATGACGATGACGACGACAATGCACAAGATGTATCAGATATTTCTTCGGTAGATTCCCAAGATTTAACAACAAACAAACCTAACGATGGTACAACAGATTGTGAAGATCCTTTGGTAAGACAAGCGTTATTATTAAACGCTAGAAAACGTCAAGCCCTAaccgaaataattaaaaaaatagaagacCGTTTGTTGGAAATTAATCACATTAGAAATGAATGTAGAGTGCGGCTTTTTAACCACGGAAAACCTcgaagaagaaaacaaaatagaataaaaaagcGACTTGGCACACCatattttaaagatataaatGCATTTTCCAGCCCTCCAAATTCAGACTGGttagaaatgaaagaaaataaacaactaCAAGAACATCAAATCTTGAGAGTGTATTGGACCCAAGAAGACAAATGCAACCTCATGCGTGGAGTTTTCAATGCTGTTTGCACACAAAAAATAGAAGAACTTAATCGCTTAATCAATTTTTCTGCAAAATCAAAAGTCTGCAAGCAATTTATTGAAGAAATGGACATATTTACTAACAGAGATTTGCTGAAAACATTGATGGAAAAATGGCGGACCTTAAGTTATTTACACTCCTTATCAAGCGAAGAACAATTAATTGTGAACACTATAATAAATTGGGACGAAAAACTAGATTGGTTACAAATTTCTAGCCAGTTCTTCGATGGTAGACACACAGACAGCGAATGCCGAGCAATGTGGAATTGTTACATTAACCCCAAATATTCCAAAGAATACTGGACGGACAAtgaaaataacacattaattacAATAGGCGACAAATACAATTATCAAAATTGGGATGCCATTGCTAAAGACATGCCAACCAGCAGATCAGCTTATCAATGTTGTGTTCactttcatgtcaaattatgcgAGAAATTCAACAGCGATAAATGGACCCCCGACGAAAACAGATACCTGCAGTCCATCATCGAAGACTGCACAACAGGAAGTTACATTTCTTGGAGTAGAGTCGCTTATTATTTCAAACATCGAAACAAAAGACAAATTTCCCGCCATTACAGTTCTTGTGGCGGGAACAATATCAAAAAAGGCAACTTCAGTATCGAAGaagatattttattacttacatTATTAACtctttttaagaaaaattatgcaaaaattaatacatatttcccGGATAGACTAACAGCGCAGCTAAGAAGAAGAGTTAAAACTTTAAGTATGGATGTTGGGCGCCCATGGAGCATACAGGAAGATTCAACCATTATTGCACATGTAGCTAAATACGGCCAGAAACACTGGGGTAAGTTAAAGGAAATAAACAGACCGGAAGATTGCATCCGACATAGGTACAGAACCATACATAGTTTTTTCGAATCGACACCAGGCAGTACAGTATTTCAAATTCCGCGAAGATCTGGTGCTAAATATAGAGGAAACATCCGCCAAAGACTTAGAATTGTTCacaaattagtgaaagaaaTCTTAGAcgaaatgcaaataaatttccGAGAGGAAATGTTAAgcttacaatatataaaaagagCTTTAAAACCGTTTTCCAAAGAGTTGGAAGGTCAAGCtccaaaatctaaaaaaaaaccttttgcTTTTAGTATCAACGAATTACTCGACCAATTCTTCAAAAATTCGTTCAGATGTGTGGTTAGAACACCAGTAAATTATACAGAACAAATGCTGGATGATTCGGCGGACAGAATCGaaagtttgttgaaaatgttggAAGCAAATTTCACATTCCCTAGTTTAGAAATAATCGATTCACATTCTGAATTAGATGAAATTGATAAGCAAATAATCACACGAATAGTTAATAAAAACCAACCAAATGAATCTTTACCTTCGACTAGTTCGCAGAAAAACACAGTTCAATTTGTGAAATGCATTCCGCCGACCATAGAAAATTTAATCGGCTTTCGCGGACTTTTACTAcacatgaaaactttaaaactTCACGCTAGTGGTAAATACGCAGGTTATGCCGTTTATTGCAAAACAGACCCCCACACCAAATTCATACATCATGGATATTTCTACAACAAATCATGCTTGGAGAATTTATTCGCAAAATCCAatgataaaactaaaaaaattgttttgaaaaacGAGCAACTATTCATGAAAAGAGTGATGGTATTATTTCAGTGGGCTTATGTTATAGcagatacaaaaataaaaccgATTAAAGTGGAAAAAATAAAGAGACAGAAACGAGGTCCAAAGCCTAAAGGACAAAAGCTTTATAAAGTTCATTTGATGAATCAAGCGAGGAAGAAAGCGGCGGAAGAGAGGCGACGATTGAAAGCTGCCGGTGATCAAACAGCTGGTACAAGTGTCGAACGGAATGAAGAGGAAATAGTAGAAGAAAGGATGGAGGTGAATCAAAATGCCGCTGAAGAAAGAAAACGGTTGAGAGAAGCTGCTGAAGATGAAGTTCCCGCCAAAAAGATTAACCTAGATTTGCAATCGTAA
Protein Sequence: MCASYDDILKLSNVLKDDDDDDNAQDVSDISSVDSQDLTTNKPNDGTTDCEDPLVRQALLLNARKRQALTEIIKKIEDRLLEINHIRNECRVRLFNHGKPRRRKQNRIKKRLGTPYFKDINAFSSPPNSDWLEMKENKQLQEHQILRVYWTQEDKCNLMRGVFNAVCTQKIEELNRLINFSAKSKVCKQFIEEMDIFTNRDLLKTLMEKWRTLSYLHSLSSEEQLIVNTIINWDEKLDWLQISSQFFDGRHTDSECRAMWNCYINPKYSKEYWTDNENNTLITIGDKYNYQNWDAIAKDMPTSRSAYQCCVHFHVKLCEKFNSDKWTPDENRYLQSIIEDCTTGSYISWSRVAYYFKHRNKRQISRHYSSCGGNNIKKGNFSIEEDILLLTLLTLFKKNYAKINTYFPDRLTAQLRRRVKTLSMDVGRPWSIQEDSTIIAHVAKYGQKHWGKLKEINRPEDCIRHRYRTIHSFFESTPGSTVFQIPRRSGAKYRGNIRQRLRIVHKLVKEILDEMQINFREEMLSLQYIKRALKPFSKELEGQAPKSKKKPFAFSINELLDQFFKNSFRCVVRTPVNYTEQMLDDSADRIESLLKMLEANFTFPSLEIIDSHSELDEIDKQIITRIVNKNQPNESLPSTSSQKNTVQFVKCIPPTIENLIGFRGLLLHMKTLKLHASGKYAGYAVYCKTDPHTKFIHHGYFYNKSCLENLFAKSNDKTKKIVLKNEQLFMKRVMVLFQWAYVIADTKIKPIKVEKIKRQKRGPKPKGQKLYKVHLMNQARKKAAEERRRLKAAGDQTAGTSVERNEEEIVEERMEVNQNAAEERKRLREAAEDEVPAKKINLDLQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00766443;
90% Identity: -
80% Identity: -