Basic Information

Insect: Harpalus rubripes
Gene Symbol: SNAPC4
Assembly: GCA_963082715.1
Location: OY720452.1:73626309-73628963[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.3 2.2e+04 -2.1 0.1 32 45 77 90 68 90 0.78

2 7 3.7 1.9e+04 -1.9 0.0 1 15 140 154 140 156 0.75

3 7 0.0012 6.3 9.3 0.1 7 43 214 254 213 257 0.88

4 7 5.2e-08 0.00027 23.3 0.2 1 43 263 307 263 310 0.93

5 7 0.07 3.6e+02 3.7 0.0 3 42 318 361 316 362 0.82

6 7 3.6e-07 0.0018 20.6 0.0 1 41 371 411 371 415 0.95

7 7 1.1e-07 0.00056 22.2 0.1 3 44 422 462 420 464 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.3	2.2e+04	-2.1	0.1	32	45	77	90	68	90	0.78
2	7	3.7	1.9e+04	-1.9	0.0	1	15	140	154	140	156	0.75
3	7	0.0012	6.3	9.3	0.1	7	43	214	254	213	257	0.88
4	7	5.2e-08	0.00027	23.3	0.2	1	43	263	307	263	310	0.93
5	7	0.07	3.6e+02	3.7	0.0	3	42	318	361	316	362	0.82
6	7	3.6e-07	0.0018	20.6	0.0	1	41	371	411	371	415	0.95
7	7	1.1e-07	0.00056	22.2	0.1	3	44	422	462	420	464	0.92

Sequence Information

Coding Sequence: ATGCGCAATAATTTATTAGTAGTGCTAAAGATTTCGCTGAACGAAGACGACGACATCGACGATGCATCAGACATTTCTTCAGAAGATTCTCAAGATTTAACAACAAACAAATCTAGCGAAATAGATTGTGATGATCCTGTGATAAGACATGCGTTATTATTGAATTCTAGAAAACGTCAAGCCCTGACTGAAATAATCAGAAAAATAGAAGACCGATTGTTAGAAATTAATCACATTCGAAATGAATGCAGAGTTCGGCTTTTCAACCACGGAAAAACACGtagaagaaaacaaaataaaataaaaaagcgaCTTGGAACACCATACTTTAAAGATATAAATGCTTTTCCCAGTCCTCCAAACTCAGATTGGTtagaaattaaagaaaataaacagcTACAAGAAAACCAAATCTTGAGAGTATATTGGACTCAAGAAGACAGATGTAATCTAATGCGAGGAGTTTTCAATGCTATTTGCACACAAAAAATAGCACAACTTAATcagttaattaaattttcagaaCAATCAAAAGTCTCCAAGCAGTTTGTTGAAGAATTGGATATATTTACTAATAGCGACTTGCTAAAAACATTAATGGAAAAATGGCGGACATTGAGTTACTTACATTCATTATCAAGCGAAGAACAATTGATTGTAAACACAGTGATAAACTGGGACGAAAAACTAGACTGGTTCCATATTTCCAGTCAACTCTTCGATGGAAGACACACAGACAGTGAATGCCGAGCAATGTGGAACTGTTACGTTAACCCCAAATACTCCAAAGAACACTGGACactaaatgaaaataatacgttaATTACAATAGGCGAAAAATACAAGTATCAAAATTGGGAAGCCATCGCTAAAGACATGCCAACTAGAAGATCAGCTTACCAATGTTGTGTGCACTTCCATGTCAAGTTATGCGAGAAATTCAACTGCGATAAATGGACCCCTGACGAAAGTAGATATCTGGAGTCCATCATCGAAGACTGCACAACAGGAGGTTACATTTCTTGGGGCAGAGTCgcttattatttcaaatatcgGAATAAAAGACAAATTTGCCGCCATTACAGTGCTTGTGGCGGGAAAAATATCAAGAAAGGTGCGTTCAGCAtcgaagaagatattttattacttaCATTAGTAACTCTTTTCAAGAAGAATTTTGCTAGAATTAATACTTATTTCCCGAATCGATTAAGATCGCAACTTAGACGAAGGGTTAAAACTTTAAGCATGGATGTTGGGCGACCTTGGAGCATACAAGAAGATTCTGCTATTATTGCCCATGTATCTAAATATGGTCAGAAAAAGTGGGGTTTGATAAAGGAAGTAAATAGACCCGAAGATTGTATCCGACATAGGTACAAAACTATAAATAGTTTTTTACAAACGAGACCAGACAGTACAGTATTTGAAATTCCGCGAAGATGTGGTACTAGATACAGGGGAAATATTCGTCAAAGAGTTAAAATTGTTAACAAATTAGTGAAACAAATCTTAAACGCAATGCAAATAAATTTTCGAGAAGAAATGTTAAgcttacaatatataaaaaaagctTTAAAACCGTTTACCAAAGATTTGGACGATCAAGCTCCAAAGCCTAAAAAGAAATCTGCTTGTAGTATCAACGAATTACTTGAAGAATTCTTCAAAAATTCGTACAGATGTGTGGTTAGAACACCAGTAAATTATACAGAACAAATGTTGGACGATTCCGCGGACAGAATcgaaagtttattaaaaatgttggaAGCAAATATCACATTccctagtttagaaataatcgATTCCCATCCAGACTTAGATGAAATTGACAAACAAATAATTCAACGAATAGttaataaaaatcaacaaaatgAATCTTTACCATCAACTAGTTCGCAGAAAAATGTAGTTTCTTTTGTAAAATGCATTCCGCCGtccatagaaaatttaatgGGCTTTCGCGGGCTTTTGCTACACATGAAAACTTTAAAACTCCACGCTGGTGGTAAATACGCAGGTTATGCCGCTTATTGCAAAACACACCCATATACTCAATTCATACATCACGGATTTTTCTTCCACAAATCAATCTTGGACAATTTATTCTCAACATCCAGTGAAAAAACTAAAAGAATTGTTTTGAGAAACGAACAGTTATTCATGAAAAGATTGATGATATTATTCCAGTGGGCTTATGTTATAGCAGATACAAAAATCAGTCCGgttaaaatagaaaaagtaaaaggAAAGAAGCCAGGTCCAAAACCGAAAGGACAAAAgctttataaaattcatttgatGAATCAAGCGAGGAAGAAAGCCGCTGAGGAGAGACGACGATTGAAGGAAGCTACCGGTGATGAAATCACAACAGATACAAGAGTCGAACCGAATGATTTGATGAATCAGGCGACGGAAAAAGCTGCTGAGAAAGAAAGAAAACGAATGAGGGAAGATGCCGATGATGAAGTTCCCgccaaaaaaattaatctaGATTTACAATCGTAa
Protein Sequence: MRNNLLVVLKISLNEDDDIDDASDISSEDSQDLTTNKSSEIDCDDPVIRHALLLNSRKRQALTEIIRKIEDRLLEINHIRNECRVRLFNHGKTRRRKQNKIKKRLGTPYFKDINAFPSPPNSDWLEIKENKQLQENQILRVYWTQEDRCNLMRGVFNAICTQKIAQLNQLIKFSEQSKVSKQFVEELDIFTNSDLLKTLMEKWRTLSYLHSLSSEEQLIVNTVINWDEKLDWFHISSQLFDGRHTDSECRAMWNCYVNPKYSKEHWTLNENNTLITIGEKYKYQNWEAIAKDMPTRRSAYQCCVHFHVKLCEKFNCDKWTPDESRYLESIIEDCTTGGYISWGRVAYYFKYRNKRQICRHYSACGGKNIKKGAFSIEEDILLLTLVTLFKKNFARINTYFPNRLRSQLRRRVKTLSMDVGRPWSIQEDSAIIAHVSKYGQKKWGLIKEVNRPEDCIRHRYKTINSFLQTRPDSTVFEIPRRCGTRYRGNIRQRVKIVNKLVKQILNAMQINFREEMLSLQYIKKALKPFTKDLDDQAPKPKKKSACSINELLEEFFKNSYRCVVRTPVNYTEQMLDDSADRIESLLKMLEANITFPSLEIIDSHPDLDEIDKQIIQRIVNKNQQNESLPSTSSQKNVVSFVKCIPPSIENLMGFRGLLLHMKTLKLHAGGKYAGYAAYCKTHPYTQFIHHGFFFHKSILDNLFSTSSEKTKRIVLRNEQLFMKRLMILFQWAYVIADTKISPVKIEKVKGKKPGPKPKGQKLYKIHLMNQARKKAAEERRRLKEATGDEITTDTRVEPNDLMNQATEKAAEKERKRMREDADDEVPAKKINLDLQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00768176;
90% Identity: -
80% Identity: -