Hrub020184.5
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- Abtb2
- Assembly
- GCA_963082715.1
- Location
- OY720450.1:77815030-77831009[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.3 1.2e+04 -1.2 0.1 46 84 90 127 56 130 0.66 2 3 1.6e-21 2.1e-18 68.8 0.0 6 104 1183 1282 1180 1288 0.92 3 3 2.3 2.9e+03 0.7 0.1 78 109 1288 1319 1283 1320 0.88
Sequence Information
- Coding Sequence
- ATGATTTGTGTAGAAAATTGCAACTGTATCCTCTGTCGGGAACTTCCAGGATGTGATAGTAATTTTGGTGGTGACAAGTTTGTGaatgataattttatattgGCAGTCCCTAATCAGAAATATTTCGGGGATACTCTCAATGCTGACTATAACAATAATAAGAAAAGTTCTTGTGTGGAAAAGTGTGAAAATTTGGAAAGTGTACATAAATCTGTAATATACATCTCTGGgacttttaataataatagcaaatcAGTTGCAAATAACATAGAAACTATTGATGATTCAACTACTTTAACATcttttgaagctaaagatgaacAGAAtgttataaatgttatttttaaaaatagttttaacagTGCACAACAAATTATTAACGATGTTAGTTGTGAAAATGTTTGTTGTGAATTTGACGGTATTGAAGATGATTTTCCATTGGGTATGGAAGCAGATTTGCTCAATAGACTTCAGCTTAAATTTGCCCGAAAAAAATTGTCAAGTAATTCTCGCTCAGAACATTCTCCTCCAGACAACAGAGATACAAATAAAGCATCTTCGCCTCGTGTTAACACCCCAGCAAATCTCAACCAAACTAAACCAGTATTATACTCTCCGACAGTTCAAGAATTGTCCCAATCTAACGAACGAATGGTGTCTCCCAAACGAAAAAACGAATACTTCCCTCATTTATACAACGTAGCGAATAACGTTAAGACATCTTCTTTCAATGACCATAACAACCAGAATCTGAAGAACAATGAGTTTTCGGGAAGGTTTGCTGGGCAAAATATGGTCCCTGAACGGGATACGGGTCCGAATAATTTGAATTCTGGGTCTGTGAATGCTGTAGGAAGTTTGCGATTGCCGCAAAATCATAAGAACGAGGATAAGGGAGATGAGAATAGAATGACAACGTCGAGACCGCATCATCATGTCAGCGTACATGAATTGAGAATGCAACGGGGCCAACAGTGTAATAGTTCTTCCGACGATAACCGCTCCTCTGGGCATGCGAGTATGTCAGACACCGGAAACAGCTCCCCCCGGGACGTCACCGACGGCGGAAACGATCGCTTGACTTCCGACGTCAAGTCCATCCGGAATAGAATACCTTCTCAGCATGCAAAGTTTCGCCATAGAGCAACTCCCGCAAAACTGCAGGTACCTTGGACGGGCGGGGGAGGGTTAGAGGATATTAAAATGGCGATACAACAATTAACGATGCGGTCGCATACGAGTACGAGTACTTATTCGAGTGTGAGCGCGGGAAGTGAAAGTTCTGAGCCTACGGTAAGGCGATTGATGAGGCATTCATCTCTGGAAACGATAAATACTAATGTTACAAGTGCTGATGAATTCGTTTGGGTCGATTCGCATAACAGATTGGTAGAACTACAGCACCTACCATGGACACACCACTGCATCCTCCGCGTTTTACAAACGGGCCGATGTCGCGAACATATGTCCCGAGTAAGCGTCGAGACAATCCCTCGTTTGTCTTATCTTCTTCAGCGAGCCCTCGTGCGATTGGGGCGCGAAGCCCAACGTTTGTCTTCTACTCTAGGCCTGTGTTCTAAGCATGAAGTTACAGTGTCCTTTAGGATAGTGTTGTGTCCTCCGCTAGCTGATTCTTGTATCAAGGCGTGTTTGAGAGCAGCAGCAATGTTTGCAGTTTCTGGGGATTGTACGTTAAGGCAGAGTAAGTCTTCGAGGGCAGGGTTGCAGCTTCATGTGGGGAGGTTTCATCGGTGGATGACGGATGTCAAACTCGGGAAGTTAATACACGAgtATGCGGCTGTATATTTGTGCGCTGGCCTGGAAAATTTGTTAGaagaaattttattacaatgttTACCCAGTGATTCAGACGTTACTTTAACTGCAACATTATTGGAACATGCTATTGCTAATAATGGGGACCTGTGGGGTTTGTTACAACCCTATGCGCACTTAAACGCCGGCAGAATTGCTTCAGGGGCTCTAGCTCTTCCAAGATGGGCGTCAGTGTCTTCTCTTGCCTCCCGCGACTCCGGCCGTGGTTCAGGGCCCCCAGAACCATCTCTGTTAACCACTTGCGTTGGTAGTCTAACCGAACTTCAAGAATTAGTAACACGGATGCAAGCAAGAACACCTTTATGTGCTCGGGCTATTCGCACTCTGTTTTACTTTATGCGGTGCTCGCAGTTGGAACACGGTGATTCAGCGGGTGGTGCCGTTCAGGAACTTTGCTACGAGAGGGCCTATGTGGTGCTGCCACCACTTGTGGAGTGGTTGAGAGTCGCCGTGGCCCATGGGGAACATAGACACGCGGCAGTTTTGGACAGGGATGATATTATGCAGGCTGCCAGACTTCTATTACCAGGCGTGGATTGCCCGGTGCGAGGGTTAGGCGAAGAAGCCGTCCGAGTTCGCAAATCAACCGGCAGCGAAGAAGACAGCTTGGAAGCAACACGTCAGATACAAATGGAACTCGCATTTCGCCTTTTAGCTTCCGGTCGCGCCGAACTCATTCAACAAGCTCTCGCATTATTACCTCCAAATACTCGATTAGATACTATGAACCACCAAGGACACACGGCATTAATGCTAGCAACAATACACAACGACGAATTAACCGTCATGGCTCTTTTAGACTCTGGGGCATCTGTAGATATTGAAACTCCTAGTAGTTCGAGTGCTGCTCATCCCGCAGTTAATGTAGAGTGTCAACATTGGACAGCCCTTACATACGCTGCAAGTTTAGGGAATACAGTTTGCGGGAGGTTGCTTTTAGAGCGCGGGGCAAATGTTGAAGGCGGGGCTGCTTTAAGCGAAGATAAATGCACTTTAACTCCTCTTCAAGTTGCAAGCGGGAACGGAAATTTAGACATGGTAGCTCTTTTATTAGCTCATGGGGCCCACCCGTTTATCAGCACGCAAATGAAAGATACTTTGTGTTATTCCGGGGCTGCGCAAAGAGGATGTTACAGTCCGATATCTGTCGCGGCTGCTCATGGACAGCgaatcattttacaaaaattgttatcaCAACCGATGACACCAGTCAGTAAAGAGGTATTGAGTTTGGAGGAAATGTTAGCTGAAGGAGCTGGAACAACAGTCAAAAACGAACATAATAATACACAAACTAACACAGCTCCGCAGTTCAGCAAAGCGCAAGTTAAAGCGCTTCAAGAAGCGATGTATCATAGCGCCGAAAACAACCATTTAGaaataacTGTTGAAATTCGATCAATGGGAGTTCCTTGGACATTGCATTGTTGGATGCATACTTTAAGCGCTGCACACGAAGCCCGATTAGATTGTGTAATTGATCAAttgttacaagactttttacaAGTTTGTCCAGATGATTATAGCTCTCAATTCGTGCAAGAATGCCTGCCGTTATTATTCAACATTTTCAGATACAGTAAAAAGGAAGGCACTTCATTATTACTTGCCGATATATTTTCAACTTGTTTCGGCTGGGAAGCAATAAAACCAATTCGAGATTGCGTTTTAACGGGCATGACAGCCTCTAGAATCGATCCCAAATACGTAAACAACCCCGAACTAAGCGACGTAACTTTCAAAGTCGAAGGCCGCTTATTCTACGGCCACAAAATCGTTCTTGTAACAGCTTCGCCTCGTCTTCGAGCAATGCTAAGCTCAAAATTATGCGAAGGAGGCTTACCTACTGTTCAAATAAACGATATCCGGTACCACATATTTCAAATAGTGATGCAGTTTTTGTATCAAGGTGGTTGTCAAACTTTGGAATCGAGCAATGAGGATATTTTGGAATTAATGGCAGCGGCGAATTTCTTCCAGTTGGATGGTTTATTGAGATATTGCGAGGGGAGATGTGCTGCGATGCTTACATTAGATAAtgttgtttctatgtacatccATGCAAAGGTGTATAACGCCCAACAATTACTGGAATATTGTCAGGGATTTTTGCTTCAAAATATGGTGGCACTTTTGACGTACGATGATTCGGTTAAAAGACTTTTATTCGCGAAAAAACTTCCCAATCACGATGTTTTGGCCGGTTTGTTATTAACTTTACAGAATAGAATAAAAGAACGACGAAGTAATCAGGCAAGTAATAaaatgaatcaaaataaaattaaataa
- Protein Sequence
- MICVENCNCILCRELPGCDSNFGGDKFVNDNFILAVPNQKYFGDTLNADYNNNKKSSCVEKCENLESVHKSVIYISGTFNNNSKSVANNIETIDDSTTLTSFEAKDEQNVINVIFKNSFNSAQQIINDVSCENVCCEFDGIEDDFPLGMEADLLNRLQLKFARKKLSSNSRSEHSPPDNRDTNKASSPRVNTPANLNQTKPVLYSPTVQELSQSNERMVSPKRKNEYFPHLYNVANNVKTSSFNDHNNQNLKNNEFSGRFAGQNMVPERDTGPNNLNSGSVNAVGSLRLPQNHKNEDKGDENRMTTSRPHHHVSVHELRMQRGQQCNSSSDDNRSSGHASMSDTGNSSPRDVTDGGNDRLTSDVKSIRNRIPSQHAKFRHRATPAKLQVPWTGGGGLEDIKMAIQQLTMRSHTSTSTYSSVSAGSESSEPTVRRLMRHSSLETINTNVTSADEFVWVDSHNRLVELQHLPWTHHCILRVLQTGRCREHMSRVSVETIPRLSYLLQRALVRLGREAQRLSSTLGLCSKHEVTVSFRIVLCPPLADSCIKACLRAAAMFAVSGDCTLRQSKSSRAGLQLHVGRFHRWMTDVKLGKLIHEYAAVYLCAGLENLLEEILLQCLPSDSDVTLTATLLEHAIANNGDLWGLLQPYAHLNAGRIASGALALPRWASVSSLASRDSGRGSGPPEPSLLTTCVGSLTELQELVTRMQARTPLCARAIRTLFYFMRCSQLEHGDSAGGAVQELCYERAYVVLPPLVEWLRVAVAHGEHRHAAVLDRDDIMQAARLLLPGVDCPVRGLGEEAVRVRKSTGSEEDSLEATRQIQMELAFRLLASGRAELIQQALALLPPNTRLDTMNHQGHTALMLATIHNDELTVMALLDSGASVDIETPSSSSAAHPAVNVECQHWTALTYAASLGNTVCGRLLLERGANVEGGAALSEDKCTLTPLQVASGNGNLDMVALLLAHGAHPFISTQMKDTLCYSGAAQRGCYSPISVAAAHGQRIILQKLLSQPMTPVSKEVLSLEEMLAEGAGTTVKNEHNNTQTNTAPQFSKAQVKALQEAMYHSAENNHLEITVEIRSMGVPWTLHCWMHTLSAAHEARLDCVIDQLLQDFLQVCPDDYSSQFVQECLPLLFNIFRYSKKEGTSLLLADIFSTCFGWEAIKPIRDCVLTGMTASRIDPKYVNNPELSDVTFKVEGRLFYGHKIVLVTASPRLRAMLSSKLCEGGLPTVQINDIRYHIFQIVMQFLYQGGCQTLESSNEDILELMAAANFFQLDGLLRYCEGRCAAMLTLDNVVSMYIHAKVYNAQQLLEYCQGFLLQNMVALLTYDDSVKRLLFAKKLPNHDVLAGLLLTLQNRIKERRSNQASNKMNQNKIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768934; iTF_01275531; iTF_01225975; iTF_00873196; iTF_01039412; iTF_01041045; iTF_01040264; iTF_01229868; iTF_00029464; iTF_00470097;
- 90% Identity
- iTF_00768934;
- 80% Identity
- -