Hrub049577.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- Baz2b
- Assembly
- GCA_963082715.1
- Location
- OY720457.1:49740727-49770946[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-14 9.1e-10 40.3 0.0 4 73 661 731 659 735 0.90
Sequence Information
- Coding Sequence
- ATGGATAAAGAAAATGGAGAATCCAGCGATCCTTCGAAAGCTGGTGGCAGCGAGCTGCTGGACGCCGCTGCAGCTTCGGCAACGGCGAACCTATTCGGGGCGTACTGGCAGCGCGATGCCGGAGTTGGTGGGGGCGGTGCGGCTGGACTGTTTGCGCACCCCATGCCCCATCCCGCGCTGCCCTTCGGCCTGCTACCGCCCTCGGCTGCCGCCGCCGCTGCGTCCAGGTCCTTCCCGCCCGTCACTAATACCTTGTCGGTCGCTGCTAGCCAGGCGGCCAGTCTTGGAATCAACCCTGCAGCAAGTGCGGCATGGTGGTCTATGGCTTCCCAGTTAGCGGCGCAAGACTACTTGGCGAGACTGCAGGCATCCGGCTTGAACTTTCCTCTTAGTAATCCTGGAGACATCCCGTACGCTTCTTTGGGCCTACCACCGCTGTCAGGTCATCACAAGTCATCTTCCAAGAACTCCAAGAGTTCTTCATTGAACAAGAACTCTGGAGGATCCAAGGGTAAGACATCGGCGACTGCATTAAGTATTCAGGCTGGCGCCAAACTGGATGGGAGGTTAGACCCGCTTGGAAGTGTCAACAAAGGTTCTCTCAACGCCGgCAACAACATCCTGTACAACAAATCCTCgaaatcatcatcatcatcacaCAAAAATTCTCTCCCTCTTCAACCAAGTGGCAAACTTCATGTGAAGAAACCCCCATCGTTACCATCCCCAAAACCCCCTTTGGGTGACAAAGTGGACTACAGCAAGCAACCCCTGCCGAAGAGCTCCACGCCTAAGTGTTCCCAAGCCCCTACATCTTCCAGCATCTTCACATCTCCTCTAAGCTTAGTGAACAGCTCGGAGAAGACATCCTCGACGCCTTCAACGTCTTCGGCGTCGTGTTCTGGAGTGAATACCTTCACGACGCAGTCGTTGGTGAATAGCAGTATTAGCAGTGGGATTCCGCCGAATATTCTCAGTGATCCTAGTTCAATTTTGGGCGGAGTGCGCCTCCCTCCCGATACAGAAATCATCAAATACACCTCGTCGATAGTCGGTCCGAAAATTCCCGGAACCACGAACAGAGGCAGGAAGAAAACCATCTCCCTGGACCCTCCTTCCGTCAGTGTGATGCCGACGCATTCCAGCACCGGCATGCTGATCGAACGAGGATCTAAATGGGCCAAACTAAGTGAACCTCATGACTTATCAGCCAGCAATGATAGGGTTGAGGTGATAAAATTACCGGCTACAAATGGTAGCCCGTCAGGAATAAATATTCCTTCATTCAGTGGGAATTCGGAAGGTGCCAATGATGCTCCACTTAATTTATCTCTCAAACCTTCTAGCAGTTCTTCATCTACGAATTGTCAAAGTAATTCGTTGAATTCGCTTAGTACTTTATCCGCAAACATCGGTAGCGACCGAATATCTCGAAGAAAACCCGGTCCAAAACCCCGTCGCGTAATTCAATCCCCCTCGCCATTATCTGCAACTTCTTCTGTGCCGGGCGCTCCAAGTGCTTCTCTAGCTCAATTATTCGCCGCCGCAGACTCGCCACGTCCTCCAAGTCGGAGCGATGATTCTGCTTCCGAAACAAACACAACACCCGCTATGAACCACAAAGACGGTCGACCTAGAAACTTAGGTAGAGGAGTCTCCAAGCCTAAAAAGAACACAGTAGCTTCACTTCTTGCCCAAAGTCGAGCGCTGGGAATCAAACCAGTTCAACTGGACCCAAATGCCCCGATGAACCAACAAATATCTcttttaaaatctaatatgcttgCCGCGCAATATATGGCAGCAGGGGATCCATTAGACGAAAaacaattagaaaaattaaGAGGGACTCTCAGCGATTCGAGTAATATGGAAGTGTCTACTGATTCTGATAATTTGACTGACTCAAACCAGACTGATTCCGAAGCAGAGACTGATGCAAACGGCGTTTCTAATCCAAAGAAAAGGCGACATTTCAACGAGAGAGAATTACGACTGCCGCTTGAACAAGGCTGGAAACGAGAGACAATAATCCGTGGCTTAACAAAGAATGGAGGAATTAAAGGCGATGTGTGTTATACTCCACCGGATACCAACAACAAACTCAAACAAATGTCTGACATCGGACAGTATCTAGAACAAGTTGGGAACATGGAACTAACGAAGGATCACTTTACGTTTAGCTGTAAGATTATCTTGGGCGATTATTTGCAAAAACCGCCTCCTGGAGTTACCGCAGAGGGCGAATATCTGCGTATGAATGAAGAAGACGTTACCAAAAgACTAGATGATCTCCGTGCACTGACCCGCAACAACCTAGCCGTCGAACAGCGCATAGAAATGGCTCGTCGGCAGCAAGCCGCAAGAGCTGCAGCTCGCCAAGACAGAGAACAGGCGAGAATGCAGCGTGATATGGAACGTTCAGAGAAACAAGAAGCTGCTAAACGTGATCGGGAGGCTCGATCACAACAATTGATGGAGGGCCGAAAACGTTTAGCGTTCACCTTAGAGCAGAAAGTACAAATAATATCAGAAATAGAAGGTGGTAAGACAAAATCGGACGTATCTCGAGAACTGGGCCTGGCCAGTTCGACGGTAGCGACTATTTGGAAGAACCGTGACAACATTCTTACCGCGTATGGTACAGACGACTTTACTAAATCAAAAAACGATTCGTCCCTATCCGAAAGTGCCCTGACATGCTCGGCCTCGGACAGCCTGGCAAGACGAAAACGACATGAGGAGTTAGGCCGACAACGATTAGAGGAACAGCAAAGAAAAATTCAGGAGCGGGAAATGAAGAAACAACAAGCTGCTTTACTTAAGGAACAGATGTACATACAGGAGATCAATAAACAACGGGAAATGCTCTACACTGTTGAATTGGAGAGAGAAAGAAGACGTCAACACATGGCATTAGTAAAGGCCTTGGAAGGTAGAAGACGTTTAGAAGAGCGCGAACGAAAAAAACAACAAGCCATTTTAGAAAAACAAGCCAGTAAAGAACGCCGTTTAGAGCAAAGAAGAATAGACATGGAAATCTTAACAGAACTTCGTAAACCATGCGAAGATCTGGAACTACCACACAAATCTCTCCCCGAATATCCGCGAATACCTAATCTTCGATTATCTGGACAAGCATTCGCCGATATTCTAATGGTATTCGAATTTTTGCATAATTTCGGCGAGACTCTTGGTTTTGATATGGAATCTTTGCCGTGTCTTGATTCTTTGCAACAAGCTTTACTCAACGAAAGCATAGAAGCTGAAGAAGAATTGTTGTCAGTGATGACTCATTTATTAGTTTGTGCAATTGAAGATCCCGGTATTCCAAATCCCGCAAGACATACGACTATTCTCGGGCAAAGTTTGCGTCAAGCGGATATAACTCATCAGAATTTATCCGaaatattacgtatttatttatatgcgAATGCTACAGGAGAAGTTAAAGCTTTAACGGGAGTGCATTTCGAAAGAGATCGGGAAAAACGTGTAGCAGATCATTACCAAAGTAATACAGAAATGCAGCAGACGCAAATTGGAAAAAATGCTacttattatgaatatttacaCGAAAATACTACGTGGCAAATGTCTGATAGTTTAAAAGACAAACCATTCTTAGCGTTAAGCCCTACAGACAAAGCAGAAATGCTAGCTTTTATTTGTAAcgaattattacaaaataaagcaGTTATTAGACAAATTGAAGGCTCACTAGAATGTGCAGCACAATTAAGAAAAGAACGATGGCTCTTAGATACTAAAATAAGAAAGTACCGCATGATGACAAATCGTAAATTACGATCAGAAGCAACAGAAAAGATGCAAGCGCATTTAAAAGACGGTCTAGACACTCCAATCGGTGCTGGTGGCGATGCTATGCCCCGCGGAATAGACAGTCCAGCTCCAACACCAACTCATCATAAAGACGATCTCTTAGTCGATGACGAAGAAGATATCAGCGAAAACGAAAGCGAAGGCACACAAcctgaagaagaagaagataagAAATTATCCGGAGAAGAGCTAAACAAAAAATTAGACAAACTCCTCAAAGCTTCAGAAGCCCAGTTAGAATCATTAAACAAATCTTCCCATCAGCTTCGCGCGACTTGTTACGGTCAAGATCGATATTGGCGTCGGTATTGGCTACTCCCAACCGCAGGCGGTATTTTCATCGAAGCCATGGAGTCCGCTCAACCAGAAGTTCTCGCCGAACAAATCTCCGAACAAGATCAAAAGAGAGACATCAACAGCATCGAAGATATCAAGAAAATCATCCCCGATACAGAGAGCCTACAAGATCCCAGTGCCGATAAAGAAGTCAGCCAAATTGTTGGCGGCATTAATAAACTCGAAAACAACGAACACAGAAAAACTCCAAACAGAGTAAAAGACAGCGAGATTCCAGAAgaatctaaaattaaaatggaagTTGATAGCGATCTGACGAACAAAATAAAGACTGATCAAAATGAAATTGATGAACAAAGTAAGCTGGAAAAACTAGatcaaaaaacatttaatttatttgaaaaattaggTGAATGCATGGAGAAAGAACATAAAATAGACCCAATGGAAATCGAAGAAAAAGAAGACAAGAAAGATATCAAACAAGAAATCGAAGCAAAGGCCGAAattaaagaagaagaagaaaagtACTTTCCAGATGTTGAATCAAAATGGTTCAGTATTATCTCCCGAGATCATCACACCTGCGACGGCGTCAACATGACTTCCGGCAACCGTTGGGACACCAACACCATCGGAGCCTGCACGCGAGAGAACTTCGCCACGGAGTTAAAAATCCCTGTATTTCCTCCTCCTAACTGCCAAAACAGTTACCTTTCCTGTACTTCCTGTGACAGTCCTGGTCCTTTACAGATGAGCGCCGAAGAGAGCACCCAGTTAGAGTACATCAAACTCCACGGCCCCCCTCCAAGACTAGAAAGAGTTCCAGTTCCTCAAGAGATGCGCTACGGTTGGTGGCGATCCATGGAGGATGCAACAATGAAAGAAGCGCTAGAAAATATGCATCCCAGAGGTTGTCGTGAACGAGAGTTGAAGAGAACTATGCAAGCTACGATGACGCAGATGTATGAGTGCACAGCGGGGAATGTTCATATTGAAGAAGGGAATAAAACTGCGGCGGAAATGCACGAAGCTCCAGATAGTAAACCAGAAGATGTTGCAGTGGAAGATAAACCGGGATTGTGGAATCCTGCTGTTGCAACGAGGGTCGACTTTTCCGTACTAGAAcaaGTGGAGGCTTTAGAAGATAAAGTGGCGAATGCAAGTATGCAAGTTAAAGGATGGAAAGTACCGAACAGAGATGTTGATGATATGAATCCAGGACAGGCAGTACCAATAGCAAAAGAAAGATTGGCATCACTTGAAGCTGCTATTGAACGAAGATATCTCAAACCACCTCTTGGTATAAGCACCGGCGACGCAAACTTAGCAGCCCTCGCCCAAGAACAACAACAGATGAATTCAAACTCATCTACATCTGGTCAACAACAACGCGAACAACAATCTACACCTTCGACAGTTCTTGAGGAGATTCCAAAGGGCTTAACGACGTGGCGAGATGCAGTGCAGCGGTCAAAGACTTCGGCACAATTGGCCATGTGTCTCTACATGTTGGAGGCATCCATCGCATGGGACAAGAGTATCATGAAAGCTaACTGCCAATTCTGTCACAGCGGTGATAATGAAGATAAACTTCTTCTTTGTGATAGCTGTGATAAAGGATATCACACATATTGCTTCAGACCAAAAATGGAAACTATTCCTGAAGGAAACTGgtattgcCATGAGTGTATAAATAAAGTAACGGGTGAAAGAAATTGTATCGTATGTGGCAAAAAACAGTCTTCAAGTCGATTACTTTTGTGTGATTTGTGTCCTAGAGCTTATCATCAAGATTGCATGACTCCGCCGCTACAAAaaGTACCAAGAGGTAAATGGTACTGCCCTAATTGCCATTCAAAACAACCCAATAAAAAACGAAATTCTCGCCGATCCAATAATAAAGCTACAAGAGATAGTGAAAGCAGTGATCATCCACCTACAAGTCCAGCTCCGTCGCACAGTTCAGTGACCACAAACGAAGAGCTAACTAACCAGTCCACGTCTTCGTTGAGTGCGAAGGACCCGCAGTCCAACTCAACGACGCCGTCGCAAACTGCGTCTCCGTCGACGTCCGCGCAGAGGAAAGAGCGCGTCTCGAAGAAGCTGCAAAAAGAACTGGCGCCCTGTAAGACTTTGTTGGAAGATTTGGAGTGCCATGATGATGCCTGGCCTTTCCTCTTACCTGTAAATACGAAACAGTTCCCCAcgtataagaaaattattactaGTCCCATGGATCTCTCCACCATCAAGAAACGCCTTCACGATTTATATTACAAATCTAGGGAAGAGTTCTGCATGGACGTGCGgcaaatcttcgacaactgcgAAACTTTCAACGAAGACGACAGTCCGGTAGGCAAAGCAGGCCACTGTATGCGACAATTCTTCGAGGCGCGGTGGAATGAACTCTGCCCACCTCACCCCGGAAAGAGTTGA
- Protein Sequence
- MDKENGESSDPSKAGGSELLDAAAASATANLFGAYWQRDAGVGGGGAAGLFAHPMPHPALPFGLLPPSAAAAAASRSFPPVTNTLSVAASQAASLGINPAASAAWWSMASQLAAQDYLARLQASGLNFPLSNPGDIPYASLGLPPLSGHHKSSSKNSKSSSLNKNSGGSKGKTSATALSIQAGAKLDGRLDPLGSVNKGSLNAGNNILYNKSSKSSSSSHKNSLPLQPSGKLHVKKPPSLPSPKPPLGDKVDYSKQPLPKSSTPKCSQAPTSSSIFTSPLSLVNSSEKTSSTPSTSSASCSGVNTFTTQSLVNSSISSGIPPNILSDPSSILGGVRLPPDTEIIKYTSSIVGPKIPGTTNRGRKKTISLDPPSVSVMPTHSSTGMLIERGSKWAKLSEPHDLSASNDRVEVIKLPATNGSPSGINIPSFSGNSEGANDAPLNLSLKPSSSSSSTNCQSNSLNSLSTLSANIGSDRISRRKPGPKPRRVIQSPSPLSATSSVPGAPSASLAQLFAAADSPRPPSRSDDSASETNTTPAMNHKDGRPRNLGRGVSKPKKNTVASLLAQSRALGIKPVQLDPNAPMNQQISLLKSNMLAAQYMAAGDPLDEKQLEKLRGTLSDSSNMEVSTDSDNLTDSNQTDSEAETDANGVSNPKKRRHFNERELRLPLEQGWKRETIIRGLTKNGGIKGDVCYTPPDTNNKLKQMSDIGQYLEQVGNMELTKDHFTFSCKIILGDYLQKPPPGVTAEGEYLRMNEEDVTKRLDDLRALTRNNLAVEQRIEMARRQQAARAAARQDREQARMQRDMERSEKQEAAKRDREARSQQLMEGRKRLAFTLEQKVQIISEIEGGKTKSDVSRELGLASSTVATIWKNRDNILTAYGTDDFTKSKNDSSLSESALTCSASDSLARRKRHEELGRQRLEEQQRKIQEREMKKQQAALLKEQMYIQEINKQREMLYTVELERERRRQHMALVKALEGRRRLEERERKKQQAILEKQASKERRLEQRRIDMEILTELRKPCEDLELPHKSLPEYPRIPNLRLSGQAFADILMVFEFLHNFGETLGFDMESLPCLDSLQQALLNESIEAEEELLSVMTHLLVCAIEDPGIPNPARHTTILGQSLRQADITHQNLSEILRIYLYANATGEVKALTGVHFERDREKRVADHYQSNTEMQQTQIGKNATYYEYLHENTTWQMSDSLKDKPFLALSPTDKAEMLAFICNELLQNKAVIRQIEGSLECAAQLRKERWLLDTKIRKYRMMTNRKLRSEATEKMQAHLKDGLDTPIGAGGDAMPRGIDSPAPTPTHHKDDLLVDDEEDISENESEGTQPEEEEDKKLSGEELNKKLDKLLKASEAQLESLNKSSHQLRATCYGQDRYWRRYWLLPTAGGIFIEAMESAQPEVLAEQISEQDQKRDINSIEDIKKIIPDTESLQDPSADKEVSQIVGGINKLENNEHRKTPNRVKDSEIPEESKIKMEVDSDLTNKIKTDQNEIDEQSKLEKLDQKTFNLFEKLGECMEKEHKIDPMEIEEKEDKKDIKQEIEAKAEIKEEEEKYFPDVESKWFSIISRDHHTCDGVNMTSGNRWDTNTIGACTRENFATELKIPVFPPPNCQNSYLSCTSCDSPGPLQMSAEESTQLEYIKLHGPPPRLERVPVPQEMRYGWWRSMEDATMKEALENMHPRGCRERELKRTMQATMTQMYECTAGNVHIEEGNKTAAEMHEAPDSKPEDVAVEDKPGLWNPAVATRVDFSVLEQVEALEDKVANASMQVKGWKVPNRDVDDMNPGQAVPIAKERLASLEAAIERRYLKPPLGISTGDANLAALAQEQQQMNSNSSTSGQQQREQQSTPSTVLEEIPKGLTTWRDAVQRSKTSAQLAMCLYMLEASIAWDKSIMKANCQFCHSGDNEDKLLLCDSCDKGYHTYCFRPKMETIPEGNWYCHECINKVTGERNCIVCGKKQSSSRLLLCDLCPRAYHQDCMTPPLQKVPRGKWYCPNCHSKQPNKKRNSRRSNNKATRDSESSDHPPTSPAPSHSSVTTNEELTNQSTSSLSAKDPQSNSTTPSQTASPSTSAQRKERVSKKLQKELAPCKTLLEDLECHDDAWPFLLPVNTKQFPTYKKIITSPMDLSTIKKRLHDLYYKSREEFCMDVRQIFDNCETFNEDDSPVGKAGHCMRQFFEARWNELCPPHPGKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768300; iTF_01104378; iTF_01275283; iTF_00028756; iTF_01225686; iTF_00469655;
- 90% Identity
- iTF_00768300; iTF_01104378;
- 80% Identity
- -