Basic Information

Insect: Harpagoxenus sublaevis
Gene Symbol: -
Assembly: GCA_030770355.1
Location: JASTWR010000011.1:74224-78214[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.2 36 6.5 4.5 1 23 416 438 416 438 0.98

2 10 0.73 1.3e+02 4.7 3.6 1 21 444 464 444 467 0.96

3 10 0.00027 0.049 15.5 0.6 2 19 474 491 473 495 0.90

4 10 0.00015 0.028 16.2 2.1 3 23 503 523 501 523 0.97

5 10 0.0014 0.26 13.2 0.1 3 23 531 552 529 552 0.93

6 10 0.19 35 6.5 1.8 1 23 559 582 559 582 0.98

7 10 8e-06 0.0014 20.3 0.8 1 23 586 608 586 608 0.97

8 10 0.0011 0.2 13.6 0.5 1 23 614 636 614 636 0.98

9 10 2.9e-05 0.0052 18.5 1.6 1 23 642 664 642 664 0.97

10 10 1.2e-06 0.00023 22.8 2.8 1 23 669 691 669 691 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.2	36	6.5	4.5	1	23	416	438	416	438	0.98
2	10	0.73	1.3e+02	4.7	3.6	1	21	444	464	444	467	0.96
3	10	0.00027	0.049	15.5	0.6	2	19	474	491	473	495	0.90
4	10	0.00015	0.028	16.2	2.1	3	23	503	523	501	523	0.97
5	10	0.0014	0.26	13.2	0.1	3	23	531	552	529	552	0.93
6	10	0.19	35	6.5	1.8	1	23	559	582	559	582	0.98
7	10	8e-06	0.0014	20.3	0.8	1	23	586	608	586	608	0.97
8	10	0.0011	0.2	13.6	0.5	1	23	614	636	614	636	0.98
9	10	2.9e-05	0.0052	18.5	1.6	1	23	642	664	642	664	0.97
10	10	1.2e-06	0.00023	22.8	2.8	1	23	669	691	669	691	0.96

Sequence Information

Coding Sequence: ATGGACGCGGAAGAGGGGGAGGCGAAAATGTGCAGGCTATGCGGCCAGAACGAGAAGATCTACATCGACGTGTTCGGTGAGGAAGGTATCAGACGCTACCTCGGCAGCAAGATTCACAAGAAGATCGACATCCTGATAGATGAGAAGGATCCTCTGCCCAAGGCGATCTGTATTAATTGTGTGGGCAAGCTCGAATTCGTTTGCGACTTTCAAGAGGAGTGTCGGCGCACCCAACAGGTGTTACGCGATCAGTACAATCTACCACCGTTAACAGAGTCTACAGAGGTAAAGAATGAAGAAGCACCATCGCTGGTGGGCACGTCGTCGTCGGATAATAACAACAGTATTGAAAAGAATCTTAATTCCACTAGAAGCAGTCAGGCTGAAGAGAACCAGGTTGACGTAGTCAAGGATTCGGAACAGCCGAAAAAGAGGAAAACAATTCCGAAGATTTTGAGAAGCCTTCGCAgtcagcaacagcagcaacaagtTTCCAAGTGCAACGATAAAACCGCCGAAAAAAATGCACAGACTCAAAGTACAGCCGAGAAAAATGCACAGACAGAAAAAAGTACAGAAACATCGCTGACTCGTTGGCTTAGAAGCAGGCAAAACGCAGATTCGTCTGCGGTGGACAACGAGGAGATTCCGATCGCAAGTAGATTAAGGAGTCATAACATCGAAAATAACATCGGTACTCGTTctgtgaataataataataataataatagcaacAACGAGAGTGCAGACAAACAAAGCAGTCTGAAGCAGCCACAGCAGCAGGCTTCATCAGCGACGATTCGGTTACCGACCTCAGCCTTGAGTAAATTATTGATGATCATTTCTAGCTCTCCCGATATCGAGATCTCCGTAAAGGAGACGAGAAATCGGAGTAACGACGCCGAGGATATTAGCTTTACCGTGGAGCTGTGCAAGAAACAGAACGACGAGGTGTCGTCGGCGCGAGCGCGGGTCATTCCCGATCAGGACTATTGTCTAGTCGACACAGCGATCGTAGAGCTGCTGCAGAACGAGAACAGCCCGGAGGTGAACGGCATTGTCAACAGCATCCTTAACAGCGCGTCGACGAAGAACAGCAGTGCGGCGGCAAAGTTGAAAAATTTAGCGGAGTTGGAGCAACGGCTGGAAGCCACGCAGAATCCAGAGGATCTCTTTAAGATCGACGGCGAGGAGATTAAGGTAGATGATAACGTGGAGCACGTCGTAAATGAAACGCAAAACGGTTACGCGTGCAAGCTGTGCCGTAAGTTCTACGAGCGCCGAGACAAGTGTACGGTTCACGTGAAGACGCATCTCGGTATCAAGCAGTACACGTGCGTCGTCTGCAACGCCAAGTTTGTTTGCAAATCTGACGTGATGAAGCACATCCGATGCTCGCACACCAATCCTAGGCCCGTACAATGTCCCAAATGTCCCAAGCGATTTAAATCCAAATTTTACCTGGCCGAACACGACAACGTTCACAAGGGTGTGCGACCGTACGGTTGTGCGGACTGCGGACAGAGTTATCACCACAAGGTTTCGTTGCAAATCCATATGAAGTCGCATCTGCCGCCGCAAAATCTGGCCTGCGAATATTGCGGTAAAGTCTTCCCATTTCGCACGAGATTGCTCGGCCATATCGCGAGTGTTCATATGAAAAAACGGCGTAACTTTCGTTGTCGCTTCTGTTACAATCTTTACTCGAGTCTGTCGGTGCTGAACGAGCACATCAAAACCCGCCACGCGACCACGTACACGTGCGACACATGTGGCAAGACCTTCAAGGTCGCTTCCAAGTACAAGGCGCACGTGCTGCAGCACTCCAATCCCAAGCCGTTTGTGTGCAACGTTTGCAACAACCGTTATGCGTCTAAAGCGTTTCTCAACGAGCACCTGTTGAAGCACGAGGGTTTGCGCAAACACGTATGCCAGGAGTGCGGCGCGAAATTCGCACAGGCGAGTCATTTGGCCGCTCATCGTCATGTACACGGGGAAAAGACGCACGCGTGCCCGGAATGCGGTAAAAAGTTCAATCGTCGCGATAACATGAAGGTGCATCGGAAACGGCATTTCGACGGGAAAAAGCCTAGCGCGACTGGCAAACAGAAGGTTCCATCCAACAATAACAACCTGACTGCTTTTACCGCGTCCGTTAACGAGAAATAA
Protein Sequence: MDAEEGEAKMCRLCGQNEKIYIDVFGEEGIRRYLGSKIHKKIDILIDEKDPLPKAICINCVGKLEFVCDFQEECRRTQQVLRDQYNLPPLTESTEVKNEEAPSLVGTSSSDNNNSIEKNLNSTRSSQAEENQVDVVKDSEQPKKRKTIPKILRSLRSQQQQQQVSKCNDKTAEKNAQTQSTAEKNAQTEKSTETSLTRWLRSRQNADSSAVDNEEIPIASRLRSHNIENNIGTRSVNNNNNNNSNNESADKQSSLKQPQQQASSATIRLPTSALSKLLMIISSSPDIEISVKETRNRSNDAEDISFTVELCKKQNDEVSSARARVIPDQDYCLVDTAIVELLQNENSPEVNGIVNSILNSASTKNSSAAAKLKNLAELEQRLEATQNPEDLFKIDGEEIKVDDNVEHVVNETQNGYACKLCRKFYERRDKCTVHVKTHLGIKQYTCVVCNAKFVCKSDVMKHIRCSHTNPRPVQCPKCPKRFKSKFYLAEHDNVHKGVRPYGCADCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPFRTRLLGHIASVHMKKRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCDTCGKTFKVASKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHVCQECGAKFAQASHLAAHRHVHGEKTHACPECGKKFNRRDNMKVHRKRHFDGKKPSATGKQKVPSNNNNLTAFTASVNEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523594;
90% Identity: iTF_01409443; iTF_01405996; iTF_01408525; iTF_01407631; iTF_01406769; iTF_00885396;
80% Identity: -