Basic Information

Insect: Harpagoxenus sublaevis
Gene Symbol: ZNF236
Assembly: GCA_030770355.1
Location: JASTWR010000029.1:804348-807679[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.1 2.1e+02 4.1 1.7 2 23 212 233 211 233 0.87

2 10 1e-05 0.0018 20.0 2.7 1 23 239 261 239 261 0.98

3 10 2.9 5.2e+02 2.8 1.4 2 23 268 289 267 289 0.91

4 10 1.6e-08 3e-06 28.7 1.4 2 23 363 384 362 384 0.98

5 10 4.9e-05 0.009 17.8 5.0 1 23 390 412 390 412 0.99

6 10 0.00017 0.031 16.1 4.0 1 23 418 440 418 440 0.97

7 10 2e-05 0.0035 19.1 2.6 1 23 446 468 446 468 0.98

8 10 7.2e-06 0.0013 20.4 0.7 2 23 711 732 710 732 0.97

9 10 5.6e-06 0.001 20.8 4.1 1 23 738 760 738 760 0.98

10 10 0.00048 0.087 14.7 8.2 1 23 766 789 766 789 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.1	2.1e+02	4.1	1.7	2	23	212	233	211	233	0.87
2	10	1e-05	0.0018	20.0	2.7	1	23	239	261	239	261	0.98
3	10	2.9	5.2e+02	2.8	1.4	2	23	268	289	267	289	0.91
4	10	1.6e-08	3e-06	28.7	1.4	2	23	363	384	362	384	0.98
5	10	4.9e-05	0.009	17.8	5.0	1	23	390	412	390	412	0.99
6	10	0.00017	0.031	16.1	4.0	1	23	418	440	418	440	0.97
7	10	2e-05	0.0035	19.1	2.6	1	23	446	468	446	468	0.98
8	10	7.2e-06	0.0013	20.4	0.7	2	23	711	732	710	732	0.97
9	10	5.6e-06	0.001	20.8	4.1	1	23	738	760	738	760	0.98
10	10	0.00048	0.087	14.7	8.2	1	23	766	789	766	789	0.98

Sequence Information

Coding Sequence: ATGAATCTCGGACTGGGAGCAAACAATCTACCAAGACAGATGGACGAGGCGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCGGTGCTCAATATTATATATGAGCATAACAAGAATCTGGAATCGTCAGGCAATACCATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATAGATATCGGTCTAAATCCGAGCAACTCCACGAGTATGTCCAGTATTTTGCCCAGATCCATGGGAAACAATCAGCAAGAAGAACAACGACCTGTTCCAGTTACAACCGCCAGCAATATAGATGCTTCTCAAATTACGAAAAACACTCATTTGGTGGTAATAAGTCCTAAGGAGAATTGTTCGGAATTGGTGAGACTCTCGCAAGTGTGCCCGTCGAAGTATTCGAAAGTCATCGCGAAGGCGGACACCACAAATGGATCGGAGATACAAGGCACGAGTGAACATGAAAAAACAATGCAGAAAAGCAGTGCTGTGTCGTGCGAGAACGAAAGAAATCCTTTGTTTATGAAGAACTTCCAGAGCACAATACAGTCGGAAACGCTTGTTTCCTCTGGTATGGACAGCTCGGCGGAGTGTAACACTCTGCTGCAGTGCCACATGTGCGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACACCTGAAATCTCATCGCGGTGCCAAAGAGTTTGAGTGTTCGGAATGTTCCCAGCGATTCTGTACAAACGGCGGTCTCAGCAGGCATATGAAGATGCACACGAATAAGCAGCGGTGGAAATGCACGACCTGCCAGAAGATACTGGGCAGCAAACTGCAATTGAAATTTCACAGCAAAATGCATACCGAGGCTTGGAATGTTTCATCCACGGAACCGGACAGCTCTCAGAAGGATATTATTTCCTCGAACTCTGGTCTATCGGGGATAACGACGCTGGATGTCCGAGTAGGTCCGAACCCGTCAGTGTCTGAGAAGGTTTTGATGGACGCAGTCGCCGAGAGAAAAAGCATGGACTGCGCTGATGAGAACATGGAGAAGAAAGAGACGAGGGAGTACACTAATAAGTGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGACCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCATACAAGTGCGAGCACTGTAACAAGAGTTTCGCGGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGCAAGAAGACGTTCTGCTGTCACGTCTGCAGCAGCATGTTCGCTACGAAAGGCAGTTTGAAGGTCCACATGCGGTTGCATACGGGTTCGAAACCATTCAAGTGTCCCGTGTGCGATCTCCGATTCCGCACTTCGGGTCACAAGAAGGTACACATGCTGAAGCACGCGAGGGAACATAAGGGCGGTGCGAAGCGCAAGCCGAAACATTCGAAGATCGCGGCAGTGGCGGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTCTGGACAATGCGTCGACggcgatgacgatgacgacttCTGCCATGATCAACGACGAGACCGCGCCATCGCAGAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGATACTACGGTTCATCTGCCGAATCAAATCGCGTTTAACGacgcgacgacaacgacgattCTCAATAACAATTCTATGTTGTCCGTGAATGAGAACAACGAGCTGGTGGCGAATCTGCAGTTCCTGTTGGCGAACGGCCTCGTCACCATTCAAACGGACGACACCCTGTTGACACAGCCAGCGATAAACGGTTCCGATACCACCGGCGCCGGAGTGCCAACTAACGTGATCGAGTTAGTCAATCCGGACCCTTTTCAAGAAGCTTGTGACCTAGGTAACGCCGATCACATGATGATAACTAGTCAAGTGCCGACGGAGACGACGACCGCGGACACGAGCAACGCAACAATTGTTCAGATGAACAATTGTATGCCCCCTGTGTCCGTACAGATACAGACACAAGACACCGGCGACGAGGTGTCTGAAGTGAAGACGAGCGATCaaacgatgacgacgacgatgccggcaatgacgacggcgacggcgaaaGCTTCGACGCAGCCTTCAAGGAAAGAATGCGACATATGCGGCAAAACGTTCATGAAGCCGTATCAGATGGAACGGCACAAGCGCATTCACACGGGAGAACGACCGTACAAGTGTGAGCAATGTGGCAAGTCGTTCGCGCAGAGGTTTACACTGCAGCTGCACCAGAAGCATCATACCGGTGACCGGCCGTACTCCTGTCCGCACTGTAAGCACTTATTCACGCAAAAGTGCAACCTACAGACGCATCTGAGACGCGTTCACCAGCTAGTCATGCTCGACGTAAAGAAGCTAAAGAGCAACCAGCAGATGCTGGGAGCGCTTCTACAGGACAATCAAGGCAGTGATACCAAGCTACTAAACCTGGACGACATACTGGTGGTAGATTTTCTCAAGTAA
Protein Sequence: MNLGLGANNLPRQMDEANTSSLNNSREQPVLNIIYEHNKNLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTSMSSILPRSMGNNQQEEQRPVPVTTASNIDASQITKNTHLVVISPKENCSELVRLSQVCPSKYSKVIAKADTTNGSEIQGTSEHEKTMQKSSAVSCENERNPLFMKNFQSTIQSETLVSSGMDSSAECNTLLQCHMCGDQGFTTERLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQRWKCTTCQKILGSKLQLKFHSKMHTEAWNVSSTEPDSSQKDIISSNSGLSGITTLDVRVGPNPSVSEKVLMDAVAERKSMDCADENMEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKHSKIAAVAEAAASLEKVGNSSLDNASTAMTMTTSAMINDETAPSQNLDYPALEQTVNLDTTVHLPNQIAFNDATTTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPAINGSDTTGAGVPTNVIELVNPDPFQEACDLGNADHMMITSQVPTETTTADTSNATIVQMNNCMPPVSVQIQTQDTGDEVSEVKTSDQTMTTTMPAMTTATAKASTQPSRKECDICGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQRFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLRRVHQLVMLDVKKLKSNQQMLGALLQDNQGSDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127676;
90% Identity: iTF_00885362;
80% Identity: -