Hsub015400.1
Basic Information
- Insect
- Harpagoxenus sublaevis
- Gene Symbol
- ttk
- Assembly
- GCA_030770355.1
- Location
- JASTWR010000112.1:145723-148142[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.5e-06 0.0045 18.1 0.0 8 38 196 226 189 232 0.71 2 5 5e-12 5e-09 37.1 0.0 4 43 242 281 240 283 0.86 3 5 0.82 8.2e+02 1.2 0.0 25 35 314 324 297 329 0.84 4 5 8.3 8.3e+03 -2.0 0.0 32 44 338 351 338 352 0.87 5 5 3.3e-10 3.3e-07 31.3 0.1 4 39 354 389 351 393 0.93
Sequence Information
- Coding Sequence
- ATGACTGACGCTGGCCAGTGTAAAACCAATCAGAATTATCGCTTTAAATGGAACAACCATCAGAATCATCTGTCCGACGTCGTGCGGCAGCTCTTGAAGGAGAACTGCATGGTGGATGTCACCCTGTCCGCAGCTGGTCAACGTATTCACGCGCATCGCATTGTATTATGCGCATGTAGCATTTTGTTTCAGgaAGTGCTCAGTCAAGTGACGGAAGATTGTCCAACGATTATTCTAAGCGATATATCACCCCAggatataaaatcaattatcGAATTCATGTATCACGGTGAAATCCATGTTCCTGTCGAAGATATCCATAGCTTACTTGAGGCTGCACGATCGTTGAGAATAAGCGGTCTTGTTGACATAGATGGAGTTGAAGAGAACGAAATTGTTAAAAGTAAAAAGGATTTGAAGATGGAAGAGACTGTGACAGAGGTAAGGGAAGTTGAAGACAATGCTGGATCCTTGGAGAATGACTCGCATGAACCGAGCACTGCTGAAAATTGTACGctgaataaaaagaagaaacgtcGCCGCGAGACTGTAAAGAAAGATTACAACGACGACATGTTGGCGTCTGCAATTAATGACTTGAAATTAGGACAGACTTTAATAGAGGCTGCTACTAAGCACAATATACCACGCTCAACGTTGTATATGCGGGCGAAAGCATTAGGCATACATTTAAACGCATCAAGAAACGGATATCCCGCAGAGTGCATGAATGCAGCTATAAATGCCGTGATCAATGGCTCGAGCTTGCAGCATGCAGCAGAGATATTTAGAATACCTAAAACAGTGTTATGGAGGCGTATACAAAAGGAGGGCTATCAGACCCTACGTTCTGAAATGAGAAAGACTTATGCTTTAGACACAAGAGAGGCCGCTGTTAAAGCTTTGGAAAGAGGAGAAAATTTGACAAAAGTTTCTCTGGAATTTAAAATACCAAAGACTACATTGTTTAGAGAAAAGGCACGGCTGGTAAATCAAGGTAAATTGCCGTTATCATTTTGGAAGAAACGCAAAAGTGAGAATGAGGAATTAAAAAAGTCGCGATTGGAAGAAGCTGTGGCTGCTTGCAAGGGTGGCAGAATGTCGCAAGCTGCAGCATCCATGACGTATCACATTCCAAAAACTACGATATGGCGAAGGCTTCAACAAGATGGGAAAAAGGTGGAAAAATCGAACGCAAAGAAGAAACAACGATTGACCAATACGCAAGTGCTGCACGACGCTCAGGTGAAGACGCAAGAAACATCCAATTTCAATTATTGTGAGGTTACATCGGAAATACCTATAACTTATATAGATGAGAATAGCATACCTGAGGATTCCGTGATAATCTTGACAACGGAGGATATGGATGAACTGAATCTGGAGGGAGGCAAacaaattattgtaaattcGGAATCTGGACAGGAATATATTCCATATACGATAAGTATCGAAGATAGCTCAAACTATTCGAGGGCTGAGAGTTAG
- Protein Sequence
- MTDAGQCKTNQNYRFKWNNHQNHLSDVVRQLLKENCMVDVTLSAAGQRIHAHRIVLCACSILFQEVLSQVTEDCPTIILSDISPQDIKSIIEFMYHGEIHVPVEDIHSLLEAARSLRISGLVDIDGVEENEIVKSKKDLKMEETVTEVREVEDNAGSLENDSHEPSTAENCTLNKKKKRRRETVKKDYNDDMLASAINDLKLGQTLIEAATKHNIPRSTLYMRAKALGIHLNASRNGYPAECMNAAINAVINGSSLQHAAEIFRIPKTVLWRRIQKEGYQTLRSEMRKTYALDTREAAVKALERGENLTKVSLEFKIPKTTLFREKARLVNQGKLPLSFWKKRKSENEELKKSRLEEAVAACKGGRMSQAAASMTYHIPKTTIWRRLQQDGKKVEKSNAKKKQRLTNTQVLHDAQVKTQETSNFNYCEVTSEIPITYIDENSIPEDSVIILTTEDMDELNLEGGKQIIVNSESGQEYIPYTISIEDSSNYSRAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423555;
- 90% Identity
- iTF_00765777;
- 80% Identity
- iTF_00765777;