Basic Information

Insect: Harmonia axyridis
Gene Symbol: RREB1
Assembly: None
Location: chr1:86488982-86521974[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00034 0.03 15.2 1.3 1 23 84 106 84 106 0.98

2 16 0.00033 0.029 15.3 0.4 1 23 119 141 119 141 0.98

3 16 0.00017 0.015 16.2 5.1 1 23 147 169 147 169 0.97

4 16 2.8 2.5e+02 2.9 0.1 1 23 228 252 228 252 0.77

5 16 0.00056 0.05 14.6 0.4 2 23 258 280 258 280 0.91

6 16 0.62 55 5.0 0.7 1 10 326 335 326 342 0.90

7 16 0.071 6.4 8.0 0.1 1 23 470 492 470 492 0.96

8 16 6.5e-06 0.00058 20.7 0.7 1 23 501 523 501 523 0.99

9 16 0.00082 0.073 14.1 3.1 1 23 529 552 529 552 0.97

10 16 0.00049 0.044 14.8 3.0 1 23 949 972 949 972 0.97

11 16 0.00049 0.044 14.8 0.4 2 23 1187 1208 1186 1208 0.97

12 16 0.12 11 7.2 6.3 1 23 1214 1237 1214 1237 0.97

13 16 0.046 4.1 8.6 2.5 1 23 1265 1289 1265 1289 0.95

14 16 0.4 36 5.6 1.4 1 23 1346 1369 1346 1369 0.92

15 16 0.016 1.5 10.0 0.4 3 23 1416 1436 1414 1436 0.93

16 16 0.0099 0.88 10.7 5.8 1 23 1442 1464 1442 1464 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00034	0.03	15.2	1.3	1	23	84	106	84	106	0.98
2	16	0.00033	0.029	15.3	0.4	1	23	119	141	119	141	0.98
3	16	0.00017	0.015	16.2	5.1	1	23	147	169	147	169	0.97
4	16	2.8	2.5e+02	2.9	0.1	1	23	228	252	228	252	0.77
5	16	0.00056	0.05	14.6	0.4	2	23	258	280	258	280	0.91
6	16	0.62	55	5.0	0.7	1	10	326	335	326	342	0.90
7	16	0.071	6.4	8.0	0.1	1	23	470	492	470	492	0.96
8	16	6.5e-06	0.00058	20.7	0.7	1	23	501	523	501	523	0.99
9	16	0.00082	0.073	14.1	3.1	1	23	529	552	529	552	0.97
10	16	0.00049	0.044	14.8	3.0	1	23	949	972	949	972	0.97
11	16	0.00049	0.044	14.8	0.4	2	23	1187	1208	1186	1208	0.97
12	16	0.12	11	7.2	6.3	1	23	1214	1237	1214	1237	0.97
13	16	0.046	4.1	8.6	2.5	1	23	1265	1289	1265	1289	0.95
14	16	0.4	36	5.6	1.4	1	23	1346	1369	1346	1369	0.92
15	16	0.016	1.5	10.0	0.4	3	23	1416	1436	1414	1436	0.93
16	16	0.0099	0.88	10.7	5.8	1	23	1442	1464	1442	1464	0.98

Sequence Information

Coding Sequence: ATGCAGGGCATTGTATTTATGCACCAACAAGGTTCACCACCTCCAAATAATACTTCAGACATGGAAGTATCCCCTAGTCCAATGAACTACTCGACCAAAGAAAAAACAGACCAAAGCGGCCACCAAGACTCAGGCGTCTTCTCAGCCACAAACAACTCAATATACGACGTATCTACCAACCGAAGCCACATGACGCAGTCAGAAACCTGTCCATCAGAAGCAGGCAGCGATTGCAGCGCCACCGATCGCTTCTCCTGCCCGATCTGCTCCACTGTTTTAACCTCCCAACACGAATTCACCCTACATATCAAATCTCACAATGTTGACTCTGAAACCGTTCAAGACGATAAAGGTTATACCTGCAGGATATGCTTCAAGGTGCTCAGTTCTAGTTCTAGTCTGGACAGGCATGTCTTGGTGCATAGTGGAGAGAGGCCTTTCCACTGCAAATACTGTGGTGATACCTTCACAACCAATGGTAACATGCACAGACATATGAGAGCCCACAACCTGAAGAACAAGAACTATGAATCGGATGGTAGCACTGATAGCAGCGCCAGCAACACCGAATACAACAATAACAGAGTCAAACCCAAGCAGAACAGAAAGCGTAAGCTGGATATCGACGACGAGGAAATCACTGATACCAAGAAAGTATTCGCTGAAGATGCCAGAAGGATCTACAGGTGTCCAGTCTGTGAAAGAAACGACTTTGACTCGGTATCAGTCTTAGAGAACCACATGGAAGACAACCACCCAGACTACCCAGCCAAATGCCACCAGTGCGGTATAGTCTTCTCCAACCAGAAGCAGGTGGAGGTCCACCGCGCTGCAGTTCATGAAAACGTAAATCCCAAACATTCTGTCGTTGGTTTCAAAGACCTCACCTTCGTGGACTTCTCCAGCCAGAAATTTCCACATATAGCCAGGTACGAGTGCGAGAAGAACCTGCACAAGGGTTCTGGAAGCTTGAAGTTCCAGTGCAACAAATGCAACCGTGCGTTTCCTTGCTCCAACGCCCTGGAGTTCCACGAAAAAGACTGCAGGGAAAGCGGAGCTGGTCTAGACCTCTCTTCGCAAAAACTCACTGAGGTGGAGGTCAGACGTAACGACTTCTTTTCCCGATTAAACCTCCAAGATGTATCACCCGAAAAACATATCAGAGAAACCCCTGGAAAGACTGAGTTCAGACTCCTACCAGACAACAACAAAGACCTGGCGGACATACAGACCATCATTTCCATGACCACCAGTGGTAGCCTACTGCAACAGCTTCAGCATAAGACCAACGAGATGGCTAATAACCTGCAGAAGTCTGAAGTGCAGCAAGAAAGTGGCAAGAATGAAGAGGAAGAGACCCAAGATGCCTTCGCCGTTGAGTTCAGAAAGATGAAGTTGAAAGGAGAGTTTCCTTGTAGATTGTGTACAGCCGTGTTCCCAAATCTCCGAGCGTTGAAAGGCCACAACAGAGCGCATTTAAACGGTAATAACAATGGCTCTTATCGTTGCAACATGTGTCCTCATTCTTCCGTGGATAAAGCTGCTCTTATACGTCATATGCGCACCCACAACGGTGACCGACCTTACGAATGTTCACTTTGTAATTATGCCTTTACCACCAAAGCGAACTGCGAAAGGCATCTTAGAAACCGCCACGCCAAAACCACCAGAGAAGAGGTCAAAAAATCCATAATCTATCATCCTTCCGAAGACCCTACCAATGATGAAATGACCAAGCTGTCCAACAGGGAAGACTCCAGGAAGATGCACAATTCTTCCAGTGAAGTGTTCGATAATTCCCAAGAGAAAATCCACTGCTCTACTCCAAAATTCGAGACTAGACCTCAGCATATACCAACTCCGGAAAGAAACCCTATGCTTTCCAACCTCCAATCGCTGAAAGAAAGCCTCAGTTTGTCCATGGGCAAAGAACCTTTGCAGTTGTTCCCTAACATCAACGATGTCATCCGAAACGAGAACCTGAAGACGTTGAAGGAATACAGAAACGTCCATAACGGTGCTATCCCATACCTGCCACCTTACGGCTTCCAACCTAAAATAAATCCTAATCCAATTCCACCATCCTCTGGTAGTATCCAAGTGAAGGATCTCAGTGCCTTGAAGATGAACCCATACGAAAATTCGGAAGATGAAGAGTATGAAGATGACGAAGAATCAATCGACGTTGTTTTAGATCTGAGCAAGAAAAAGACGCCTGAGGAAGAACCAAAACCTGCTGAAGACGCTCCCCAAGATTTGTCTGTTAAAGCTTCCCCGCCTCTTCCGCAAGTTACTCCACCTGTGGCGGAAATGCTTCAGGCTAACCTCCTGAGGACACCTCCTAAGATCGACCCTACGACCTTATACACTCAATTGGCTCTTATGAGAGGTAGTTTTGGGCTGCCAGGTTGGTCTGGCTTTCCATTCAATCCGCTGTTTTTGCAACAGCTTCAGAACCAAGTACCTTCTGGTGCGGCTTCAGATATGAAGGAGAGGTTGAGGAACCAGCTGTGTGGTGGTACTGTCATTACTGACAATCGTTTGCAAGCGTTGCAGCAGATTAGAAATGCTGGGTTAATGCCAATGGCGATGAATAATTTCGGTGCTGAGGCTAGACAAGAGGTGGACAGCACGTACTGTGCCTCCAAGACAGCGGAAGATATGAGCAGACCGTTGAGTTTGAAAATTGAACAAAATATGAGTGATAATATGTCTAATATGTCCAGTCCATTGCCACCTACCAAAGCAGACATACTACAATCGCCTAACTCGGTGAAGATGGTAATAAAGAACGGTATTTTGATGCCTAAGCAAAAGCAGAGGAGGTATCGCACTGAAAGACCTTTTACTTGCGAACACTGCTCTGCCAGGTTCACCCTACGCTCAAACATGGAGCGTCACATCAAACAGCAACATCCCCAGTTCTGGTCGCAACGACAAAGAGGTAACATCGGCAACCCTGGAAGAAAATCCCAGGTGATGCCTATGAAGCCCGGTTTCTGCGATTTGAGCATACCCAACTACGAGATGCAAAAAAGTCAAGGGTATGACGAGAACAAGGAGATGTTTAACGATCGACTAAAATACGCCATCCTTGCCCAACATCTCAGGGGTGTCAATAGCTACAACCCCAACGCTCTTAAACGTGAAGAAGACGAGGAAGACGCTTTGGTTATTGACGAAAACAGCGAGGAGAAACCGGATGTTGGACAGGAATATTACAAGGAAGAAGAGCAGCAAGAAGAAGAAGAAGAGAAAGAGGAAACTGCCGAAGAGGAAACGAGTTTTGAAACCAAGTCTGGTAAATTGGAAGAGAGTCAAGACTTGGTACCTGTGTCCAGGTTGTTGGATAACGCTTCTCAGCAACAGTTCAACGAGTATTTCAAGAGAGATGTTGAAGAAAATTGTGCAGGGAGTGAAGAAGACGAAGAGGGATTGGTTGCCAGTGGTAGCACCAGCGAGGGAAATATGTCTGGAACTGATGAGAATAAATCCGAATCAGAAAACACCGCACCAGTCAAGAAGAAGTCAGCCTATTCCCTGGCACCAAACAGAGTGAGCTGCCCTTACTGCAGCCGGAAATTCCCTTGGACTTCCTCCCTACGTCGTCATATCCTAACCCACACAGGACAGAAGCCCTTCAAGTGCAGCCATTGTCCTCTGCTCTTCACCACCAAGTCCAACTGCGACAGACACCTGTTGAGGAAACACGGCAACGCTGCCACCACCATCACCAACGACGTGGCCAATAACAACGCCAACTACCTTATGAGAAACGTGCCCGAAAGGCCTTTCAAGTGCTCGAGCTGTCCTAGCAGTACTTTCTCCACGTACACCAACTTGAAAAAACACATCAGCTCTAAACATGCTACAAACGCTCAAGGTGACGACATCAAGGCTCAAGGGTATGAAGCTGGTAGCTCAGAAGACGAGAAGATCATCAGCGTTGCCGATTCTGTCAACGAATGGACCAACCAAAACCTTCAGACTAAGATGCAAGAACCTCTACCAAGTGTGGTGAATGCTGACCAACCTTTCAAGTGCCATCTCTGCGAGTTTTCCTTCGGTGAACGCCAAGAAGCTTTGGACCACATCAAAGACAAGCACGTCAGCGAATACAACACCTTGATGTCCAAGAATGCCTTGGATAACAGTGCTACCACACCTGAAGAGAGTACTCACAACGATGAAGAAGATTCAGAAGTTAGAGGAAAGTTTCCTGATTACTCCAACAGGAAGGTGATATGTGCCTTCTGTATGCGTCGGTTTTGGTCCGCTGAGGACCTGAGGAGACACATGAGGACCCACACAGGTGAGAGGCCCTTTATGTGTGACATCTGTAGGAGAAAGTTTACATTGAAACACAGCATGCTGCGACACAGGAAGAAGCACAACGTTAACTTTGACAACGACGGTGCTGCCAACAGTGACGAAGAAGGAGTGTTGACCAAATACGAAAGCGGCAATAACAATAAAAGAGCCGATGATTCTGATTGTAACGAAGGTGGTGACCTCATCAGCAACTTGCTGGGTATCCGACCATCCTTCATAGAAAAGGTGCTAACAGCTTCCGCAGATGATGCTGCCAAACTGCTGGGAGTTAACAACGGTGCGAAAGAGTAA
Protein Sequence: MQGIVFMHQQGSPPPNNTSDMEVSPSPMNYSTKEKTDQSGHQDSGVFSATNNSIYDVSTNRSHMTQSETCPSEAGSDCSATDRFSCPICSTVLTSQHEFTLHIKSHNVDSETVQDDKGYTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRAHNLKNKNYESDGSTDSSASNTEYNNNRVKPKQNRKRKLDIDDEEITDTKKVFAEDARRIYRCPVCERNDFDSVSVLENHMEDNHPDYPAKCHQCGIVFSNQKQVEVHRAAVHENVNPKHSVVGFKDLTFVDFSSQKFPHIARYECEKNLHKGSGSLKFQCNKCNRAFPCSNALEFHEKDCRESGAGLDLSSQKLTEVEVRRNDFFSRLNLQDVSPEKHIRETPGKTEFRLLPDNNKDLADIQTIISMTTSGSLLQQLQHKTNEMANNLQKSEVQQESGKNEEEETQDAFAVEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGSYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEMTKLSNREDSRKMHNSSSEVFDNSQEKIHCSTPKFETRPQHIPTPERNPMLSNLQSLKESLSLSMGKEPLQLFPNINDVIRNENLKTLKEYRNVHNGAIPYLPPYGFQPKINPNPIPPSSGSIQVKDLSALKMNPYENSEDEEYEDDEESIDVVLDLSKKKTPEEEPKPAEDAPQDLSVKASPPLPQVTPPVAEMLQANLLRTPPKIDPTTLYTQLALMRGSFGLPGWSGFPFNPLFLQQLQNQVPSGAASDMKERLRNQLCGGTVITDNRLQALQQIRNAGLMPMAMNNFGAEARQEVDSTYCASKTAEDMSRPLSLKIEQNMSDNMSNMSSPLPPTKADILQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNIGNPGRKSQVMPMKPGFCDLSIPNYEMQKSQGYDENKEMFNDRLKYAILAQHLRGVNSYNPNALKREEDEEDALVIDENSEEKPDVGQEYYKEEEQQEEEEEKEETAEEETSFETKSGKLEESQDLVPVSRLLDNASQQQFNEYFKRDVEENCAGSEEDEEGLVASGSTSEGNMSGTDENKSESENTAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTITNDVANNNANYLMRNVPERPFKCSSCPSSTFSTYTNLKKHISSKHATNAQGDDIKAQGYEAGSSEDEKIISVADSVNEWTNQNLQTKMQEPLPSVVNADQPFKCHLCEFSFGERQEALDHIKDKHVSEYNTLMSKNALDNSATTPEESTHNDEEDSEVRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFMCDICRRKFTLKHSMLRHRKKHNVNFDNDGAANSDEEGVLTKYESGNNNKRADDSDCNEGGDLISNLLGIRPSFIEKVLTASADDAAKLLGVNNGAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130772;
90% Identity: -
80% Identity: -