Basic Information

Gene Symbol
ZFY
Assembly
None
Location
chr5:39203776-39216809[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 7.9 7e+02 1.5 1.4 1 20 264 283 264 285 0.86
2 19 0.11 9.7 7.4 0.1 6 20 348 362 344 364 0.93
3 19 1.1 97 4.2 0.6 1 23 370 393 370 393 0.93
4 19 0.0018 0.16 13.0 3.0 2 23 461 482 460 482 0.98
5 19 0.0082 0.73 10.9 0.1 1 23 501 522 501 522 0.97
6 19 0.0039 0.35 11.9 0.8 2 23 526 547 525 547 0.97
7 19 0.3 27 6.0 0.8 3 23 575 595 574 595 0.97
8 19 0.13 12 7.1 2.9 1 23 610 633 610 633 0.92
9 19 0.079 7 7.8 0.1 2 23 646 667 646 667 0.96
10 19 8.3e-06 0.00074 20.3 6.1 1 23 700 722 700 722 0.97
11 19 0.0023 0.2 12.7 0.1 1 23 738 761 738 761 0.93
12 19 0.00049 0.044 14.8 0.4 1 23 778 801 778 801 0.95
13 19 0.0002 0.018 16.0 0.4 2 23 814 836 813 836 0.95
14 19 4.8e-05 0.0043 17.9 0.3 1 23 853 875 853 875 0.95
15 19 1.6 1.5e+02 3.7 0.0 1 21 903 923 903 926 0.87
16 19 0.0004 0.036 15.0 0.7 2 23 936 957 936 957 0.97
17 19 0.00091 0.081 13.9 0.2 1 23 970 993 970 993 0.97
18 19 3.5e-06 0.00031 21.5 1.6 1 23 1000 1022 1000 1022 0.99
19 19 0.00044 0.039 14.9 0.8 1 23 1036 1059 1036 1059 0.97

Sequence Information

Coding Sequence
ATGTCGGACGTTGAAGTGGGCATTCACGCCCGGTGCTGTAGGCTTTGCCTAGTGGAAAATAAGGAGACGATAAAGGACTTGGGTAAAGGCGTAGTGTTAAGAGAACGTATACTCGCCGTATTATCGATTGAGATTAAAGAGGATGATGTTATGTCAAAATATGTCTGTGACAGCTGTTCGCAGAAAGTGGAAACTTGGTGCGAATTCAAAAGGAATTGCCAGAGAAATCAGTCTACTATTTCATCATGGGCAAAAGAAAGCGAAGGAGGAAGAGTAGCTGTCACTGTAAAGGAGGAGGTGATTGACGACACCTCCACTGAAGAGGAGGAAGTAGAAGTAGCCCAGGAATGTCATATCAGCGTAAAATTGGAACCAGTTGATTTTGAAAATCATGACGTGTCGTCATTGACCAATGGCAACCACAATGACACTACCTGTTCTTTATCTCCACCTCGGAATGATGAATCGCAAGGAAGCATAGAAAACAGTGAGTGCGAAATGGAAATTTTAGGAACACAAGACTTGGCAGTAATGAATAGTGCTGGAACATCTTCCGAGCAAAGTCATTCCGAGAAGATAGAATTCGCTGCAGGTTTGAAATTGATCAAAAGTGACTCGACTCCAATTGAGATGGAGAGTTTGTCTCCCCTAGAGAGCAGTTATATTGAAAAATGTAAGGCGATGGTGGATATGTATCGCTCAATGAAGTGCGCATGTCACTCAGCCACTCATCCTAACCTCAAAGGGCTGTTGTCACATCTCCGATCGGTGAAAATATGGTTCCCCGTTTTCACCTGCTACAATTGCATGATAACATTCACAGACAGATCTTCTAGTGGCAAACATATCCACAAATGCCCAAATAGGAATTTGGACACTTTGGTCAAGTTGTCCAACCTCAAGAAGAGAAGCACCCTCAAAACCAGGCTGTACCAAAACTACAGATGTATCAAATGCAGGTTCATATATTCCTTCCACGAGGATTTCTGCAAGCACATCGATGAGGAACATTGCGAAGAGGTGGCACCTTACAGCTGCTCCTGTGGAAAGACCTTCGATTCTTTGGAAGATTACAAGGATCACATCTATGTATCCTGCATGGTGGAGTACTTTTGCGACGCTTGCAACATCGCTGTAAGAACTTTGAAGGAATTTATCAATCATGCTCAACACCAACATGACAATTCGGAAGGGTTTAGCCTGATCCTGGACGACAACTATAAGAAGAGGACTTTCCATAGGGTGGAGCCTAGAGAAAACAAAGAAATCTTGGGAAAGAGGAGGAGTTCCACCTATGGTAGAGCACCAACCGTAGAGATCGAAGATGAGGTGCAACCAAGCCCTCCCAAGATTGCCAAAACCAGCCGGAGCATTCCAACCAAATGTCCACAGTGCGACAAGGTCTATTCCTGCCAGGCAAACATGTTGAGACACTTCCGAACCCATCAAGATGTCGTCAAGAAGGAAGAACCTGAAGTGGAGGCTTCGGATAACTCTTTCTACAGATGCCCCGACTGCCAGATTATGTTTAACGCAGCGGAGTGGGATAGACACAAGGAGACTCACGAACAGACCAAATGCAACGAATGCGACAAGATATTTTTGTTCCAGACGGAGTTGGAACAGCACAGATCGGTCCACTTAAACCTCAAGGTTTACAGAGATGCCAAAACGGATTCGTACAAGAGCACCATGCTGAGTCCTAACGCTGAGATGCCGATATGTAACATTTGTAACATATTGTGCGAGAATTTCGAAGATCTGGAAAGCCACAAGCTGTCCCACGAAGATTTGGAAGATGAAGGTGTACCTCTCGAGCTGTCCAAGTATTCATGCGTGACCTGCAACAAACACTTTGTGTCTTATACGGAGTACAGCGATCACAATATTAAGAACCATACCGATAAGCAGATATCTAATTTGGCATATCCGAGGAAGTGCGATGAATGTGATAAGATAATCACCAGCGGATCAGCCTTCGCGAGTCACAAGGCGATGCATAGGAGACTGAGAGATCAATCTGTTAGACTGTCGAGCCCCGAGTCACCTTTGGAAAGACCAAAGTCCAGAAAGTCCAATCCGGAAGGCGAAGACTACCACACGTGTAAAAAATGCTTTAAGGTGTTTTCGAGCAAGTACAATTTGAAGATGCATATGAAACTACACGGAATAAACATGACCTCAACCAGAACATCGAAGTCCCCAAGAAAGTTCACCTGCGACAGATGTAACGTGAACTTTGGAAATGCCGATGCCTTGAACAACCACATCGATGAAGAACACGACGATATGCCGGATCTAGCCGAGGAATTCGACAGTGGTCCGTATATTTTCACCTGTGACATATGTGTGCAAAATTTCACCACTAAAGCCGCACTTATACAGCACAAGGCGAAACAACACACGCAGGAAGCTGGGCCGTCCAACAGGTACGCTACTTACTGCAAGTACTGCAAGATTGGGTTCGAACGTACTTCGGATCTTGAGGAACACATGATGCAGGAACATTCGGAGATACCGGTCACCAAAACACCCAAGATGGGGCACAATAAGGGTTTCAGTTGCAAGATTTGCAAGAAGAGCTTTTCGTCGCAGCCTGCGATGTATGCTCACATGGGGTGGCATAAACGTACCAACAACGAGGGACCTTTAACCTCTCCAATGAAAAGGACGCAAATGCTGCTACCAAAGCCCAAGAAATCAGACTTCGAGTGTCTAACTTGCGGTCAAGAATTACCGAATGATGTAGCGTTGAAAATCCACAACATCGAAAAGCACGGCAACATGGCTGCTTTGTTAACACCCAGATGCGATTCTTGCGATCAAGAATTCGCAACGAAGACAGAGTACGAGAACCATATGAAGTTACACGAGATAGTGGAAAACCAAAAAACTCAAAAAGTGACATTTTCTTGCCAGTTGTGTGCGGCTTCTTTTAGTAAGAGTGAAACTTTGCAAGCACATGTGAAAATAAGTCATCCGACGTGTCTTCAGGAATATAAGTGTCCACATTGTGCCAGGACTTTTGACAAGCAGGCTTCGCTGACCAATCACATTAAGGTTCACGAAAAACAGAAGGTTGTTGTTGGAAACTCCAAACCGCTCTACTTCTGTTCGATTTGCAATAAGGGTTTCCATTTACCAAAAGAATTAAGAGCTCATACCATAACCGCTCATCCTTTTTGA
Protein Sequence
MSDVEVGIHARCCRLCLVENKETIKDLGKGVVLRERILAVLSIEIKEDDVMSKYVCDSCSQKVETWCEFKRNCQRNQSTISSWAKESEGGRVAVTVKEEVIDDTSTEEEEVEVAQECHISVKLEPVDFENHDVSSLTNGNHNDTTCSLSPPRNDESQGSIENSECEMEILGTQDLAVMNSAGTSSEQSHSEKIEFAAGLKLIKSDSTPIEMESLSPLESSYIEKCKAMVDMYRSMKCACHSATHPNLKGLLSHLRSVKIWFPVFTCYNCMITFTDRSSSGKHIHKCPNRNLDTLVKLSNLKKRSTLKTRLYQNYRCIKCRFIYSFHEDFCKHIDEEHCEEVAPYSCSCGKTFDSLEDYKDHIYVSCMVEYFCDACNIAVRTLKEFINHAQHQHDNSEGFSLILDDNYKKRTFHRVEPRENKEILGKRRSSTYGRAPTVEIEDEVQPSPPKIAKTSRSIPTKCPQCDKVYSCQANMLRHFRTHQDVVKKEEPEVEASDNSFYRCPDCQIMFNAAEWDRHKETHEQTKCNECDKIFLFQTELEQHRSVHLNLKVYRDAKTDSYKSTMLSPNAEMPICNICNILCENFEDLESHKLSHEDLEDEGVPLELSKYSCVTCNKHFVSYTEYSDHNIKNHTDKQISNLAYPRKCDECDKIITSGSAFASHKAMHRRLRDQSVRLSSPESPLERPKSRKSNPEGEDYHTCKKCFKVFSSKYNLKMHMKLHGINMTSTRTSKSPRKFTCDRCNVNFGNADALNNHIDEEHDDMPDLAEEFDSGPYIFTCDICVQNFTTKAALIQHKAKQHTQEAGPSNRYATYCKYCKIGFERTSDLEEHMMQEHSEIPVTKTPKMGHNKGFSCKICKKSFSSQPAMYAHMGWHKRTNNEGPLTSPMKRTQMLLPKPKKSDFECLTCGQELPNDVALKIHNIEKHGNMAALLTPRCDSCDQEFATKTEYENHMKLHEIVENQKTQKVTFSCQLCAASFSKSETLQAHVKISHPTCLQEYKCPHCARTFDKQASLTNHIKVHEKQKVVVGNSKPLYFCSICNKGFHLPKELRAHTITAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00130761;
90% Identity
-
80% Identity
-