Basic Information

Insect: Aphidecta obliterata
Gene Symbol: -
Assembly: GCA_963966015.1
Location: OZ014433.1:26268231-26282458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 6.7 7.1e+02 1.5 1.4 1 20 265 284 265 286 0.86

2 19 2.7 2.8e+02 2.8 0.1 6 20 349 363 346 365 0.93

3 19 0.02 2.1 9.5 0.6 1 23 371 394 371 394 0.94

4 19 0.0033 0.35 11.9 2.9 2 23 463 484 462 484 0.98

5 19 0.6 63 4.8 0.1 1 23 503 524 503 524 0.86

6 19 0.033 3.5 8.8 0.3 2 23 528 549 527 549 0.95

7 19 0.33 35 5.6 0.6 3 23 577 597 576 597 0.96

8 19 0.57 60 4.9 2.0 1 23 612 635 612 635 0.89

9 19 0.067 7.1 7.8 0.1 2 23 648 669 648 669 0.96

10 19 2.1e-05 0.0022 18.8 6.0 1 23 701 723 701 723 0.97

11 19 0.028 2.9 9.0 0.0 2 23 740 762 739 762 0.91

12 19 0.0011 0.11 13.5 0.2 1 23 779 802 779 802 0.95

13 19 0.021 2.2 9.4 0.1 2 23 815 837 814 837 0.92

14 19 2.5e-05 0.0026 18.6 0.3 1 23 855 877 855 877 0.95

15 19 1.2 1.3e+02 3.8 0.0 1 22 904 925 904 927 0.88

16 19 0.00055 0.058 14.4 0.7 2 23 937 958 937 958 0.97

17 19 0.00078 0.082 13.9 0.2 1 23 971 994 971 994 0.97

18 19 1.7e-06 0.00017 22.3 2.5 1 23 1001 1023 1001 1023 0.99

19 19 0.00012 0.012 16.5 0.5 1 23 1037 1060 1037 1060 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	6.7	7.1e+02	1.5	1.4	1	20	265	284	265	286	0.86
2	19	2.7	2.8e+02	2.8	0.1	6	20	349	363	346	365	0.93
3	19	0.02	2.1	9.5	0.6	1	23	371	394	371	394	0.94
4	19	0.0033	0.35	11.9	2.9	2	23	463	484	462	484	0.98
5	19	0.6	63	4.8	0.1	1	23	503	524	503	524	0.86
6	19	0.033	3.5	8.8	0.3	2	23	528	549	527	549	0.95
7	19	0.33	35	5.6	0.6	3	23	577	597	576	597	0.96
8	19	0.57	60	4.9	2.0	1	23	612	635	612	635	0.89
9	19	0.067	7.1	7.8	0.1	2	23	648	669	648	669	0.96
10	19	2.1e-05	0.0022	18.8	6.0	1	23	701	723	701	723	0.97
11	19	0.028	2.9	9.0	0.0	2	23	740	762	739	762	0.91
12	19	0.0011	0.11	13.5	0.2	1	23	779	802	779	802	0.95
13	19	0.021	2.2	9.4	0.1	2	23	815	837	814	837	0.92
14	19	2.5e-05	0.0026	18.6	0.3	1	23	855	877	855	877	0.95
15	19	1.2	1.3e+02	3.8	0.0	1	22	904	925	904	927	0.88
16	19	0.00055	0.058	14.4	0.7	2	23	937	958	937	958	0.97
17	19	0.00078	0.082	13.9	0.2	1	23	971	994	971	994	0.97
18	19	1.7e-06	0.00017	22.3	2.5	1	23	1001	1023	1001	1023	0.99
19	19	0.00012	0.012	16.5	0.5	1	23	1037	1060	1037	1060	0.96

Sequence Information

Coding Sequence: ATGTCGGAGGCTGAATTGGGCATTTACGCCCGCTGTTGCAGGCTTTGCCTGTCTGAAAATAAAGAGACACTGAAGTGCGAGGACTCGGACAGAGGCGTTGTGTTGAGAGAGCGTATTCTGGCTTTCCTATCGATTGATataaaacACGATGATGTTATATCCAAACTTGTTTGTGAAGACTGTTCAGAGAAAGTCCACAGTTGGTGCGAATTTAAGAAAAGTTGCCAGAGAAACCAGTCAACTATTCAATCATGGGCGAACCAGAGCGACGACACAGAAGCTACCTGCCAAGTGAAGGAAGAAGTGATCGATGACACATCTTCCACTGAAGAAGATGACATTGAAGTGGTTCACGAAAATAATATAACTGTTAAATTGGAACCTGTGGATGTCGAGCACCACGAAGTATCATTGACTAATGGCAATTCTGAACATGCCCCATCTGAATCTTCGGCCCGCGAAGATGATTTTCCGGAAAGCATGGAGAACAGTGAACGCGAGGATGaaattcaaggaacaaaagATGTGTCAATACCGAATACTACAGGAAGATACTCGGAACAACGTCATTCAGAGAAAATCGAATTTGCTGCAGGATTAAGACTGATAAAGAGCGATGCAACTCCCATCGAAATGGAAAATTTGTCCGCCCTGGAAAATAGTTATATAGAGAAATGCAAGGCAATGGTAGACATGTATCGTTCCCTGACCTGCGCGTGCCATTCAGCCACCCACCCCAACCTGAAAGGACTGTTGTCGCATCTTCGATCAGTCAAAATATGGTTCCCCGTCTTCACCTGTTACAATTGCATGATCACCTTCACCGATAGATCCTCCAGCGGTAAACACATTCATAAGTGCCCGAACAAGAATCTCGACACTCTGGTTAAAGTGTCTAACTTGAAGAAAAGGAGCACACTCAAGACTAGGATCTACCAAAATTACAGGTGCATCAAATGCAGGTTCATTTACACGTTCCACGAGGATTTCTGTAAGCATATCGATGAGGAACATTGCTATGAAGTTGCTCCGTATAGTTGTTCATGCCAACAAACGTTCGATTCTCTGGAAGATTACAAAGATCATATTTACGTTTCATGCATGGTGGAATATTACTGcgatatttgtaatattgcggTGAGAACCTTGAAGGAATTTATAAATCACGCACAACATCAGCATGATAACTCTGAAGGGTTTGTTCTTCTCCAGGAAGACAACTATAAGAAAAGAACGTTTCATAAGGTGGAGCCtagagaaaacaaagaaattctGGGGAAAAGGAGGAGTTCTACATACGGGAGGGCAGCAACTGCGGATCAGATCGAAGACGAGGTCCAAGCCAGTCCTCCTAAGAATTCCAGACTCAGTCGAAGTATCCCGACGAAATGTCCACAGTGCGATAGAGTTTACTCTTGCCAAGCCAATATGTTAAGACATTTCCGTACCCATCAAGATGGGGTCAAAAAGGAAGAACCTGAAGCGGAAACTTCTGATAATTCCTTCTATAGATGTCCCGATTGTCAAATCATGCTGAACGCAGCTGACTGGGAAACGCATAAAGGATCGCACGAACAGTTGAAATGTTTGGAGTGCGAGAAAGTATTTTTGTTCCAGACGGAGCTGGAGCAACATCGTGTCGTTCACTTGAATCTCAAAGTTTACAGAGACGCGAAAACAGATTCGTACAAGAGCACCATGCTGAGTCCAAATCCTGAAATGCCCATCTGCGATATCTGTAATATACTCTGCGAGAACTTTGAGGATTTGGAAAGTCATAAATTGTCGCATGAGGATTTGGAAGACGAAGGGGTGCCTTTGGAGATGTCCAAATATTCATGCGTAACTTGTAACAAGCATTTTGCGTTGTATGCGGAATATAGTGATCATAACATAAAGTTCCACGCTGATAAACAAACCACCAGTCTTGCTTATCCGAGAAAGTGCGATGAATGTGATAAAATCATCACGAGTGGCTCGGCCTTCGCTAGCCATAAAGCTATGCATAGACGACTTAGACATCAATCTGCTAGAATGTCTCCGGGATCCCCGACAGACCGACCGAAATCGAGGAAATCGAACGAAGGGGATGAAGATTACCACACATGTAAGAGATGTTTCAAAGTCTTCTCCAGCAAGTACAACCTAAAAATGCACATGAAATTACACGGGATAAACATGATGACGGGCAGAACCTCGAAGTCGCCTAAGAAATTATACTGCGACAGATGTGATTTGACCTTCGCGAATGGGGAAGCCCTCAACTATCACATAGATGAGGAACACGACGATATGCCCGATTTAGCGGAGGAGTTCAACGCCGGACCGTACATTTTCACGTGCGATatttgcgtgcaaaatttcgcgaCCAAAGCCGCTCTCATACAGCACAAAGCAAAACAACACACCCAAGAAGCTGGTCCGTCCAACACAATCGTTACATACTGCAAGTATTGTAAGATTGGATTCGAACGGATGGGGGATTTGGATGAACACATGGTTCAAGAACATTCTGAAATACCGATCTCAAACAAAACTCCTAAGATGACGCAACACAAGGGATTCTCCTGTAAAATATGCAACAAAAGTTTCTCCTCCCAACCAGCCATGTATGCGCATATGGGGTGGCATAAAAGAACCAACAACGAAGGCCCCTTAACACCTCCGGTAAAAAAACCGACACCGCAGACCAAACCGAGAAAGTCAGAGTTCGAATGCCTTACCTGCGGTCAAGAACTACCCAACGATGTAGCCCTCAAGATACATTCTATCGAAAAACACGGTAACATGGCGGCTCTGCTGACGCCAAGATGCGAATCGTGCAACCAAGAGTTCGCCACCCAGACCGAGTACGAGAACCACATGAAGTTGCACGAAATCGTGGAGAACCAGAAGAAGCAGAAAGTGACGTTTTCGTGTCAATTGTGTGCGGCGTCGTTCAGTAAGAGCGAAACTCTGCAGGCCCATGTGAAAATTAGCCACCCCACGTATCCTCAGGAGTACAAGTGCCAACATTGCGGAAGGACTTTCGACAAGCAGGCTTCGCTCACCAACCACGTTAAAGTGCATGAGAAGCAGAAAGTGGTCGTTGGCAACGCGAAACCGCTGTTTTTCTGTTCCATTTGCAATAAGGGTTTCAATTTACCGAAAGATTTGAGGACGCATACCATAACTGCTCATCCTTTCTGA
Protein Sequence: MSEAELGIYARCCRLCLSENKETLKCEDSDRGVVLRERILAFLSIDIKHDDVISKLVCEDCSEKVHSWCEFKKSCQRNQSTIQSWANQSDDTEATCQVKEEVIDDTSSTEEDDIEVVHENNITVKLEPVDVEHHEVSLTNGNSEHAPSESSAREDDFPESMENSEREDEIQGTKDVSIPNTTGRYSEQRHSEKIEFAAGLRLIKSDATPIEMENLSALENSYIEKCKAMVDMYRSLTCACHSATHPNLKGLLSHLRSVKIWFPVFTCYNCMITFTDRSSSGKHIHKCPNKNLDTLVKVSNLKKRSTLKTRIYQNYRCIKCRFIYTFHEDFCKHIDEEHCYEVAPYSCSCQQTFDSLEDYKDHIYVSCMVEYYCDICNIAVRTLKEFINHAQHQHDNSEGFVLLQEDNYKKRTFHKVEPRENKEILGKRRSSTYGRAATADQIEDEVQASPPKNSRLSRSIPTKCPQCDRVYSCQANMLRHFRTHQDGVKKEEPEAETSDNSFYRCPDCQIMLNAADWETHKGSHEQLKCLECEKVFLFQTELEQHRVVHLNLKVYRDAKTDSYKSTMLSPNPEMPICDICNILCENFEDLESHKLSHEDLEDEGVPLEMSKYSCVTCNKHFALYAEYSDHNIKFHADKQTTSLAYPRKCDECDKIITSGSAFASHKAMHRRLRHQSARMSPGSPTDRPKSRKSNEGDEDYHTCKRCFKVFSSKYNLKMHMKLHGINMMTGRTSKSPKKLYCDRCDLTFANGEALNYHIDEEHDDMPDLAEEFNAGPYIFTCDICVQNFATKAALIQHKAKQHTQEAGPSNTIVTYCKYCKIGFERMGDLDEHMVQEHSEIPISNKTPKMTQHKGFSCKICNKSFSSQPAMYAHMGWHKRTNNEGPLTPPVKKPTPQTKPRKSEFECLTCGQELPNDVALKIHSIEKHGNMAALLTPRCESCNQEFATQTEYENHMKLHEIVENQKKQKVTFSCQLCAASFSKSETLQAHVKISHPTYPQEYKCQHCGRTFDKQASLTNHVKVHEKQKVVVGNAKPLFFCSICNKGFNLPKDLRTHTITAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00764937; iTF_00130775;
90% Identity: iTF_00130775;
80% Identity: -