Basic Information

Gene Symbol
NALCN
Assembly
None
Location
chr5:38487247-38509843[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-23 1.9e-19 69.7 14.2 1 47 828 874 828 874 0.98

Sequence Information

Coding Sequence
ATGAAGTCCCCTCCAGAAAAGTCCAGTGGGATTATATTTGTTATAGTTTATTTGAGTTTTTTCTTGGACAATGTGCTTTTAACTGTTGTCGTGCCTATAATTCCTGATTATTTGTTCTCTAATGAAATAAAAATGAAAGCAAATATTACTACTTATCATAGTGTAACCTCTCTCAGTCCTCTACAAAGAAAATATGAGAGTATTGATAGTGAGAATGGTGTTCTCGGAGCATTGTTGGCATCTAAAGCTTTTGTCCAACTGCTGTTCACTCCTTTTGTTGGATATGCTGTCACAAAAGTTGGATGTTACTTACCTATGCTATTAGGATCATGCAATATTCTTCTAGCTTCTTTACTGTTCGCCAATGGTAAGTCCTATGGTCTGCTTGTTCTTGCCAGAGCTCTGCATGGAAGTTCTTCTGCAGCAGTGTCTGTCAGTGGCATGTCCCTTTTGGCTAAACACGTTCCGGTAGAACTAAGACCAAAGTTGATGCCAGTAGCCTTTGGAGGCATAGCCTTAGGAGTCTTGCTTGGTTACCCATTTGGTGGGGCAGCTTACCAACATCTGGGAAAACAAGCACCCTTCATCCTCATTTCCTTGGTCATAAGTATGAACATAGGTCTTCAGCTGAACCTCATAAACAGATTCAGTTCAGAGGAAGAAGATGACACTGAAGAATCTATCTCTGATGACTTGGAACTTATCGATCTTTTGAAGGATAAGAAGACTATGATAGCTTCAGGTGCTATATGTATCAGCACCACTACTATGGCTGTACTAGAACCTTGCGTACCTTTATGGTTGATGGGTCATTTTCATCCTGCACCACCTAGATGGATACTGGGAGCTGTATTCATACCAGACAGTATAGGATATTTCCTTGGTTCACACTTTGGAGGTTTGCTTCCAATAGAAGGTTGGAGAGTAGGACTAACAGCAATGCTTATTGGTGGTTTGAGCTCTTGTGGTCTTTCTTCAGCTACCACAATTCCTCAACTATTCCTACCACACTTTGGCATAGGTTTGAGCGTTGGTTTAGTAGACGCTATTTTAGTACCATACCTGGCTACCATAATAGATAACAGAGGGAGCTCAAAATATGGCTCTGTGTATACCTTGCAGCAACTTGCTGTGAGTTTGGCATATTCTTTTGGACCTCTATTAGGAGGTGAAGCAGTGAATTTGATTGGATTCTCTTGGTTGATGAAGATAATTGGGTTGCTGAATGTCATGTTCAGTCCTCTTCTGTTGGAATTGGAAAAGAGTTCAAACCAGAAGGAAGGTATGGTTCTTTTGAGGAATGAGAGTGATACAGGCAGTCATACAAAAATCCACATCATCGAGTGGATCTTATGGTTGACCCTAGTCATAAGTGCCATCTACGGGGCTGTCACATTGAGCTCCATCACCCTCACAAGGTACAACAGCAACCCGACAGTCATATCGATGGAAAGAGACAGGTTTGCTTGGAACACTTCTTTCCCAGCAGCTACAATCTGCCCAATGGTCAAATACGATGAAGAAACCCTAGAAAATTATATCGAATCTTCAAACGCACCAAACAAAACTCTGTTCAGAAACTTCGTGGTATCTCTATTGGAAGCAAACTATCAGAATCTCGAAGATGTGGTCGACTACACCAACGGCGTAACACCTGAGGAGTTCTTGGACTTGATCCTGAAGCTTAAAATGAAGTTTTCGCCTTCAGAGATTTCGAACTCGGCTGGTTTTTCCAAAGTGAATTACCTCACTGAGATTGTATCAGAGATAGGGATTTGCTACTGCTTTAATTCTCAGTTGGCGGTGTATAACTCTGCCAGGTACTGGAGTTCAGGACAATGGACGATTTATCCTCTGAATGATACATTGTATGTTAATCCATTGGATGGTGAAGTTTTTGCTAACGTTATGAACATTTCAAGTGGTTTTGATATTTATATCCATGGTCCACAAGAAGTCGCAGATGTAGCTACGAAAAAAACCCATTCTGAAGATGGTTATTTCCTCCAACTCTACCTTAACGGAATGACTTTATTCAGTAGCGATAAAGTGAGAGCATTAAAAGTAAAGCAGAGAAAGTGCAGATTCTACGATGAAAGCGACTTAAGTCACTCTCCTGTTTACTCTTACGTACTTTGCAGAATGGAATGTAGGATAAGACTGAGCAAACAGTTTTGTGGATGTGTTCCACACTTCTACAGAAAACTCGATGGTGAGAAAACTTGCAGCGTGGAGGGACTGCACTGTTTGTCAAAATTCAAAGAGAAATTGATACTTTTGGAGGGTACTTGTTCTTGCCTTCCAAATTGTGATGAAGTTGTGTATTATGTTGATGATTTAGATACAAGAGAATGGTTTCTTGGTACCAATTTGCAGTGGGGATTGAAAGATTATCCGAAAATGAGGTTGAAGAGAGATGTTATATTTGGATTTACCGATTTATTAGATAAAATGTTGTCAGTAGGCCGTTCATCATCAGCAAGAGTACCAAAGTGCGCTAGGTGTCGTAACCATGGAATGATCTCCAAATTAAGAGGACACAAGAAGCACTGCATGTACAAGAACTGTGCCTGTGAAAAATGTGGTTTAATCAAGGAAAGACAGAGAATTATGGCAAAACAGGTAGCCCTCAAACGCCAACAAGCAGCAGAAGACGCCATAGCCCTACACCTAGCCTCAGCCCAATCAGGTACCAAATACGATTACCTCCCACCAGGCAGAATCTACGGTATGCAAGTAACATCTCCGGAACCACAAAGTCCAGACCTTCCAGAAGAAAAGATCCCTGAAGAACCCCCAAAAGAGCCAAGCCAAGAAGACATAGTCGTGTCCTCAGCCTCTTTAGACATGCTGAGCAAACTTTTCCCCCACAAAAAGAGAGCAGTTTTGGAGCTGGTTCTCAAGAGGTGTAACCACGATCTGCTTAGAGCTATTGAGCACTTCAACAACAGCAATACCACGAAGATGCCGGAGTTCAAGGAGGAGTCTAGCTCGGCCTTCAGACCTGTAGGTGGTAAGGGTACTAGGCTGGTTCCTGGTCACCAGAATCTTCCTCTGATACCATCTAATAAGGTGTTTATGCACAGCATCTATCCTCTGTTGCCTTGGTTCAACTCTGCTCAAGTTTTACCAAGTCCTGTTTATGTACCGGGATTCTGTGAATGTGAGCAGTATATTCCAAAGCTGGAGCAAAGCGTGAGCAAGATGATGCTTGGAAGGAAGCAAAGTTTGAAAGGAGATCAAATTCTGGCAGACTATGGACCTGAGGAAGCATTCAATGAAAATGCTGACATCGAATGGGTGAATAAGAGATGGGTTCGGAGAATGATGAGGACCTGTGCTCTCCTCAGCTTGGCATCAGTAAGTTGCAACACTCCAAAAACATTTCAGCTCTTTCCTCAACTGAAGACGATAACCATCTCAGTCGATATTGTCGTAACACTCTTATTCACAGCAGAAATGATAGCCAAAATGCATATGAGAGGGATATTGAAGGGGGAAAAACCATACCTGAAAGATCATTGGTGTAAATTCGATGCCATAATGGTATTCTTCCTTTGGTGTTCAATTATTCTACAGTTCTTAGATTTTTTAGGTCTTGCACCAACATTCAATTCGATCTTCAGAGCTCCTAGACCATTGATTATGATAAGGTTTTTGAGGGTGTTCCTTAAATTCTCCATGCCGAAATCTAGAATAAACCAGATATTCAAGCGATCTAGTCAACAGATTTACAATGTAACCCTCTTCTTCCTATTCTTCATGTCTTTATACGCACTTCTTGGAGTTCAGCTCTTTGGAGAACTCAAAAACCATTGTGTGCAGAAAGATGCAGAATTGAGCCATGTAACCATCAATAGTCTTTCAATTCCTGACACTTACTGCTCTCGAGATCCAACATCAGGTTACCAATGTCCAGAAGGAATGAAATGTATGAAATTCGAAGGCAAGTCTAGATACATCATTGGCTTCAATGGTTTCGATGAATTTGTAACAAGTTTCTTTACCGTATACCAAGCAGCCTCCCAAGAAGGCTGGGTCTTTATAATGTACAGAGCCATAGATTCCTTGCCAGCTTGGAGGGCAGTTTTCTATTTCAGCACAATGATCTTCTTCTTAGCTTGGCTGGTTAAAAACGTGTTCATAGCTGTTATTACGGAAACGTTCAATGAAATTAGAGTTCAGTTTCAGCAGATGTGGGGGCCTAGGGGGCACATACAGAACAGCACAGCATCACAGATATTGACAGGCGATGATAGAGGTTGGAAGTTGGTAACCTTGGACGACAACAAACACACTGGCGTTGCTCCAGAATTATGA
Protein Sequence
MKSPPEKSSGIIFVIVYLSFFLDNVLLTVVVPIIPDYLFSNEIKMKANITTYHSVTSLSPLQRKYESIDSENGVLGALLASKAFVQLLFTPFVGYAVTKVGCYLPMLLGSCNILLASLLFANGKSYGLLVLARALHGSSSAAVSVSGMSLLAKHVPVELRPKLMPVAFGGIALGVLLGYPFGGAAYQHLGKQAPFILISLVISMNIGLQLNLINRFSSEEEDDTEESISDDLELIDLLKDKKTMIASGAICISTTTMAVLEPCVPLWLMGHFHPAPPRWILGAVFIPDSIGYFLGSHFGGLLPIEGWRVGLTAMLIGGLSSCGLSSATTIPQLFLPHFGIGLSVGLVDAILVPYLATIIDNRGSSKYGSVYTLQQLAVSLAYSFGPLLGGEAVNLIGFSWLMKIIGLLNVMFSPLLLELEKSSNQKEGMVLLRNESDTGSHTKIHIIEWILWLTLVISAIYGAVTLSSITLTRYNSNPTVISMERDRFAWNTSFPAATICPMVKYDEETLENYIESSNAPNKTLFRNFVVSLLEANYQNLEDVVDYTNGVTPEEFLDLILKLKMKFSPSEISNSAGFSKVNYLTEIVSEIGICYCFNSQLAVYNSARYWSSGQWTIYPLNDTLYVNPLDGEVFANVMNISSGFDIYIHGPQEVADVATKKTHSEDGYFLQLYLNGMTLFSSDKVRALKVKQRKCRFYDESDLSHSPVYSYVLCRMECRIRLSKQFCGCVPHFYRKLDGEKTCSVEGLHCLSKFKEKLILLEGTCSCLPNCDEVVYYVDDLDTREWFLGTNLQWGLKDYPKMRLKRDVIFGFTDLLDKMLSVGRSSSARVPKCARCRNHGMISKLRGHKKHCMYKNCACEKCGLIKERQRIMAKQVALKRQQAAEDAIALHLASAQSGTKYDYLPPGRIYGMQVTSPEPQSPDLPEEKIPEEPPKEPSQEDIVVSSASLDMLSKLFPHKKRAVLELVLKRCNHDLLRAIEHFNNSNTTKMPEFKEESSSAFRPVGGKGTRLVPGHQNLPLIPSNKVFMHSIYPLLPWFNSAQVLPSPVYVPGFCECEQYIPKLEQSVSKMMLGRKQSLKGDQILADYGPEEAFNENADIEWVNKRWVRRMMRTCALLSLASVSCNTPKTFQLFPQLKTITISVDIVVTLLFTAEMIAKMHMRGILKGEKPYLKDHWCKFDAIMVFFLWCSIILQFLDFLGLAPTFNSIFRAPRPLIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYALLGVQLFGELKNHCVQKDAELSHVTINSLSIPDTYCSRDPTSGYQCPEGMKCMKFEGKSRYIIGFNGFDEFVTSFFTVYQAASQEGWVFIMYRAIDSLPAWRAVFYFSTMIFFLAWLVKNVFIAVITETFNEIRVQFQQMWGPRGHIQNSTASQILTGDDRGWKLVTLDDNKHTGVAPEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-