Haxy004972.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- TFIP11
- Assembly
- None
- Location
- chr5:11031144-11041377[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-92 3.4e-88 296.3 12.2 1 275 393 665 393 665 0.97 2 2 0.13 1.6e+03 -1.1 0.1 243 271 678 706 669 715 0.59
Sequence Information
- Coding Sequence
- ATGGATGACGAAGTTATTCGTTTTGAAATAACAGATCACGATTTGGATAATGAATTCAATACAAGAAGAGGTAAAGCACTAACGAAGGAGCAAAAAATTTACGGCATTTGGGCTGAAGATGAGAGTGATGATGAGAGCCGAAGACCTACTTTCAAAAGCAACAAGGAATCCAAAAATTATTCTGCTCCTATTGATTTTGTGGCTGGAGGAGTTCATCAAGTCGGTAAAAAAAAAGATGTTAAAAAGCAGGAGGATGAAGAAACAAAATTTAATCCTGAAACTCTTAAAACGGAAAAGGATTCAAGTGATTCTGAAGGGGCAGATGACTATACTTTTTCTAGAGCAGGTTTAGGTACATCTACTGAAACTAAGTCTTTTACAACAGAAATTACAGGAGATATAGCAGGTTTGCGAGTTAAAAAGAATCATTCAAATTTGAGCGATAGAGGTGTTGGTAATTGGGAAAAACACACAAAAGGAATAGGAGCAAAGTTACTTCTTCAGATGGGTTTTCAACCTGGCAAAGGATTGGGTAAAGATCTTCAAGGAATATCAACTCCTGTAGAAGCACATTTGAGGAAGGGACGAGGTGCTATTGGTGCCTATGGTCCAGAAAAGCTAGCTAAAGTGGCACAACTTACGGTTACAGACAATAAAAGTATTAAGCGAGAAAATGAGGAGCCAAATGGTGAATCCAAATGGAAAAAAGTTTCAGAGAAGAAGACAAGATACTATTATCGAAGTGTTGATGATGTTATAGAAAAAGGTAAACGTCCTGGAGCTTATAGAAATTCAGGAATCGTAAGTGATCTGTCCAAAGTTAAAGTTATTGACATGACTGGCCCTCAGCAGAGAGTACTTAGTGGATATCATGCTCTAAGTGGTCTCAAAGCCCCACCTGGTGTTGAACACTTTGAAGACGTGATTCATAAAAAATGCTCAAATTTTGCTTTACCTGAATTAACACATAATTTAGGTCTGTTAGTAGATACGACTGAGCAGGAAATCATCAGCGATGATAGAAAAAATAGAATTAATAGAGACAGAATAACAGCCTTGACGCAGGAAGAAGAATCTTTAGTAATGATACGAGAAAAGGAAGAAGCACTTGTGAAGAATTTACACAATGTAATGAGTATGGTTGGAAAATTGGTTGATCCTTCTCAAAGTTTTTCACTGGGACAAGTATCTGAGATGTTCCAGGAGTTGCAGGATGGATTTTTCGAAGAATATTGTAGATACGAATTAGCAGAATTGGCTCCAGGATTAGTTGGTCCACTCCTAACTTCAGCCATGGCTAAATGGTCACCATTGAATACTCCAAGAGAATTCTTTTACGTTTTCAAACAGTGGAAATGTATTCTGGAGAGGCATTTGATGCATCGTGGGAAACTAGAAGGTAATAAAATGGGAATTCAGCCATATGATTGTCTCATTTGGCATACTTGGATGCCTGTGATGAGAACTTGTGTTAGTACATGGAGTCCTAGGGAATGTGACAACTTGATTAATTTATTAGAGCTGTGGAGTCCCATTCTTCCGCAATGGATAGTGGATAATATGTTTGACCAGTCAATAGTGCCCCGATTGAAAGAGGAAGTTGAGTCTTGGGATCCAATGACTGATACTGTTCCTATTCACACATGGATACATCCATGGATACCACTCATTGATACCAGATTGCAGGACACAATTTATCCAATAATTCAAGATAAATTGGGAGCAGCTCTTACGAATTGGCATCCATCAGATCGATCAGCGAAATTTATGTTACAACCCTGGAAGCGTGTCCTACCTGAAGGAGCTTTCATTGCATTCCTGATAAAGCATATTGTACCTAAATTACAAATGTGCATGCAATCACTTGTAATAAGTCCACTTGAACAACATCTAGATAATTGGCATTGGGTTATGGATTGGAACGACATGCTATCTGTTGGTAATATGACTCTGATTTTGGACAAGTTCTTTTTCCCTAGATGGTTGCAAACCTTGGCCTTATGGTTGAATCATGATCCTAACTACACACAGGTCACAGAGTGGTATTCTGGATGGAAAAGAATGCTTTCTGATGAACTTCTATCACAACCAACAATTAAAGAAAACTTTCACAAAGCCTTAGAAATGATGAATAGAGCTGTTAACCTGGACCAGCAACCAGGAGCTAAAGAATCAATTTCATATTTGACAACAATAGAAACCAATGTACCACCACCCCCACCTCCACCAAAAGTAGATAACTTTGCTGATGCCCTCAGGATGACTTCGCAGATACCACAAAATTTCAAAGATCTTGTTGCAAAGAGATGTGAGGAAAATGGCATTCTGTTTGTACCAATAACAAATAAGTATCGGGAAGCAAAACAAGTTTACAGAATGGGCACAAATGGTATCCAGTGTTATATAGACAGAAATGTTGTTTTCTATTCAAACAATAATTCTACTTGGTTACCAGTTTCCTTGAATAGATTATTAGATATGGCATAA
- Protein Sequence
- MDDEVIRFEITDHDLDNEFNTRRGKALTKEQKIYGIWAEDESDDESRRPTFKSNKESKNYSAPIDFVAGGVHQVGKKKDVKKQEDEETKFNPETLKTEKDSSDSEGADDYTFSRAGLGTSTETKSFTTEITGDIAGLRVKKNHSNLSDRGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISTPVEAHLRKGRGAIGAYGPEKLAKVAQLTVTDNKSIKRENEEPNGESKWKKVSEKKTRYYYRSVDDVIEKGKRPGAYRNSGIVSDLSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVIHKKCSNFALPELTHNLGLLVDTTEQEIISDDRKNRINRDRITALTQEEESLVMIREKEEALVKNLHNVMSMVGKLVDPSQSFSLGQVSEMFQELQDGFFEEYCRYELAELAPGLVGPLLTSAMAKWSPLNTPREFFYVFKQWKCILERHLMHRGKLEGNKMGIQPYDCLIWHTWMPVMRTCVSTWSPRECDNLINLLELWSPILPQWIVDNMFDQSIVPRLKEEVESWDPMTDTVPIHTWIHPWIPLIDTRLQDTIYPIIQDKLGAALTNWHPSDRSAKFMLQPWKRVLPEGAFIAFLIKHIVPKLQMCMQSLVISPLEQHLDNWHWVMDWNDMLSVGNMTLILDKFFFPRWLQTLALWLNHDPNYTQVTEWYSGWKRMLSDELLSQPTIKENFHKALEMMNRAVNLDQQPGAKESISYLTTIETNVPPPPPPPKVDNFADALRMTSQIPQNFKDLVAKRCEENGILFVPITNKYREAKQVYRMGTNGIQCYIDRNVVFYSNNNSTWLPVSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023895;
- 90% Identity
- -
- 80% Identity
- -