Haxy008639.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- -
- Assembly
- None
- Location
- chr1:57631927-57632745[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-07 0.00012 22.2 0.0 5 38 4 37 2 41 0.93 2 2 9.9 3.5e+03 -1.7 0.1 20 26 78 84 77 85 0.88
Sequence Information
- Coding Sequence
- ATGGGGGTCATGCTGGAAGCGGTGTCTGCAGTTGTAAAGGGCAAACAATCAGTTAGGAAAACAGATCTCGATTTCAACATTCCTAGAAAAACCCTTTCGAGATATGTTAACAAATTCATAGAGAACGGTGGCAGTGAAGGCAACGTACCGGAAGAAGAAATTAAAGTTGGATATGCGAAATATTGGCAGGTATTTCCTCGGCAACAAGAAGAGCATTTGGGTAACTACCTGAAGAAAGCAGCAGACATATATTACGGTTTATCACCGAGAGAAGTCAGAAAATTGGCTTTCCAGTACGCAGTTGCTATAATTGCCAAAAAGACACCGGAGGCCACCAGTCAAGCCAGAGCATTCAGTTTCAATCCGACAAACGTCTCAAAATTTTTCGATAATTTGGAAAAAGTATTGGGAAAATACCAGTTTCTCCCGTCTGATATATACAATATGGATGAAACTGGAATAACTACAGTGCAAAAACCCAACAAGGTAATAGCTCGTCGAGGATTTAAACAGATTGGAAGAATTACATCAGCTGAAAGGGGATCTCTGGTGACGATGGCTCTTGCTGTTTCTGCTGCAGGAAACAGCTTTCCTGCTTTGTTTGTCTTTCCGAGGGTCAACTTTCGAGATTTTTTCTACAAAATGCTCCAATAG
- Protein Sequence
- MGVMLEAVSAVVKGKQSVRKTDLDFNIPRKTLSRYVNKFIENGGSEGNVPEEEIKVGYAKYWQVFPRQQEEHLGNYLKKAADIYYGLSPREVRKLAFQYAVAIIAKKTPEATSQARAFSFNPTNVSKFFDNLEKVLGKYQFLPSDIYNMDETGITTVQKPNKVIARRGFKQIGRITSAERGSLVTMALAVSAAGNSFPALFVFPRVNFRDFFYKMLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764646;
- 90% Identity
- iTF_00764646;
- 80% Identity
- -