Haxy006881.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- -
- Assembly
- None
- Location
- chr1:65105997-65106812[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-08 5.4e-06 26.5 0.0 5 38 1 34 1 38 0.94 2 2 9.9 3.5e+03 -1.7 0.1 20 26 75 81 74 82 0.88
Sequence Information
- Coding Sequence
- ATGCTGGAAGCGGCGTCTGCAGTTGTAAAGGGAAAACAATCAGTTAGGAAAACAGCTCTCGATTTCAACATTCCTAGAAAAACCCTTTCGAGATATGTTAACAAATTCATAGAGAACGGTGGCAGTGAAGGCAACGTACCGGAAGAAGAAATTGAAGTTGGATATGCGAAATATTGGCAGGTATTTCCTCGGCAACAAGAAGAGCATTTGGGTAACTACCTGAAGAAAGCAGCAGACATATATTACGGTTTATCACCGAGAGAAGTCAGAAAATTGGCTTTCCAGTACGCAGTTGCTATAAATGCCAAAAAGACACCGGAGGCCACCAGTCAAGCCAGAGCATCCAGTTTCAATCCGACAAACGTCTCCAAATTTTTCGATAATTTGGTAAAAGTATTGAGAAAATACCAGTTTCTCCCATCTGATATATACAATATGGATGAAACTGGAATAACTACAGTGCAAAAACCCAACAAGGTAATAGCTCGTCGAGGATTTAAACAGATTGGAAGAATTACATCAGCGGAAAGGGGATCTCTGGTGACGATGGCTCTTGCTGTTTCTGCTGCAGGAAACAGCATTCCTCCTTTTTTTTGTCTTTCCGCTGGTCAACTTTCCTTATTATTTTCTACAAAATGCTCCAATAGGTAG
- Protein Sequence
- MLEAASAVVKGKQSVRKTALDFNIPRKTLSRYVNKFIENGGSEGNVPEEEIEVGYAKYWQVFPRQQEEHLGNYLKKAADIYYGLSPREVRKLAFQYAVAINAKKTPEATSQARASSFNPTNVSKFFDNLVKVLRKYQFLPSDIYNMDETGITTVQKPNKVIARRGFKQIGRITSAERGSLVTMALAVSAAGNSIPPFFCLSAGQLSLLFSTKCSNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764661;
- 90% Identity
- iTF_00764661;
- 80% Identity
- -