Haxy010979.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- bab1
- Assembly
- None
- Location
- chr2:510672-556731[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-11 1.5e-08 34.7 0.0 1 39 370 409 370 413 0.90 2 4 8e-12 2.8e-09 37.0 0.0 1 39 424 462 424 465 0.95 3 4 1.9e-18 6.6e-16 58.2 0.0 1 45 479 524 479 524 0.98 4 4 4.9e-16 1.7e-13 50.5 0.0 1 40 531 571 531 575 0.93
Sequence Information
- Coding Sequence
- ATGACGAGCCAGCACTATTGCCTGAGATGGAATAATTACCAGAGTAATATGACCTCAGTCTTTCACCAGCTGTTACGGAACGAAGACTTCGTCGATGTAACTTTAGCATGCGATGATCTTTCGCTCAAAGCGCACAAAGTTGTCTTGTCTGCTTGCTCCTCCTACTTTCAAAAGTTGCTGTTGGAGAATCCCTGCAAACACCCGACGATCATAATGCCTCATGACGTCAGTTTTTCCGATCTGAAATTCATCATAGACTTCGTCTACAAAGGAGAGATAGACGTGTCTCAGACTGAGTTACAGTCTCTACTGAAGACAGCCGACCAGCTACGCATCAAGGGTCTCTGCGAGTCAAGCAACAAAGAGGACAACCCCGAGTTCGAGCATTTTCATTCGTCCAACGTGACAAGGATCAGGAAGTCCACGCATCTGAGACACCAAGACAGCGTTCCGGATGACGGCAGACCGGAGAAAGTGAGAAAGTTGGCCACGCCCAAATTGGAAGAGTTTGAGGTCGGGGAACGAGCTACCGACGAGGCCGGAAACGATGAGATGCCGGTGAACTCAGATGCTGCGACACACTATAGGGTCGATCCTGAGAGAAGAACGCCGTTGAACATGAGTAGCCAGGGGCTGCTCGCTGGCCAAACGCTTTTCTCCCACTTCGGGGTGGACACAGATGACTTCCCTCCGGAACCGCCGGCGCCTTCGGCGATACCGGTTGGTCACGTGGACATGGACCACTCCCCCACCAGGACCTTGCTCAACAGCGGTTCCATCCATAGAACGGATATCTCCGACTCGAAGTACGAGATCAAGAAGGAGGCCATAGACATAAAATTCGAGACGTTGCGATCGTACGATCAGGACTCTCTGCTTGAGATGGACTCCCACAATTCCAGGATGTCGGGCGCTGACCTCTCCAGGGACAGTCACGATGACCAGGACCAGTCTATGCACTCGATGTTGGTAACTCCGGAGCTTATGGGCATGGTGCCTGGGGTGTCCAGTCGATCTGAAGACACAATGAACGGTAGCGGTGACATGCTGATGGGAAAAAGTTCATCAGACACGTCGAGAAACCACACAGGGGGGCCTAAAACTTGGACACAAGAAGACATGGACATGGCTTTAGACGCTCTAAGAAACCATAATATGAGTCTGACAAAGGCCTCTGCAACCTACGGCATTCCCTCCACTACGTTATGGCAGAGAGCGCATAGATTAGGAATAGACACACCGAAGAAAGAAGGTCCCACGAAATCGTGGACAGAAGAGAACTTGAATAACGCCTTAGACGCCCTGAGAACAGGAACAATATCGGCCAATAAAGCTAGCAAAGCGTTTGGCATACCCAGCAGCACGTTGTACAAAATAGCCAGGAGGGAGGGGATAAGATTGGCTGCTCCTTTCAATGCAGCTCCAACCACCTGGACGCCGGAAGACCTTGAAAAAGCCTTAGAGTCCATCAGGTCCGGTCAGACGTCGGTGCAGAAAGCGTCGACCGAATTTGGAATTCCCACTGGGACTCTTTATGGAAGGTGCAAAAGGGAAGGCATTGAGCTGTCGAGGTCCAATCCAACGCCTTGGTCTGAAGATGCCATGGGAGAGGCCTTGGAGGCGGTTAGACTTGGCCACATGTCGATCAACCAAGCAGCCATCCATTACAACCTGCCATACTCCTCCCTCTATGGCAGGTTTAAAAGGGGTATAAAGTACGAATCAGAAAACCTGGAAGGAAATACAGACAGCAATTCACATCTAGAAGTCGCTTTTGGCATGGACTATGCCAATCCTCACACACATCAACAGATCCAATATCAGAACCAAACCAGCTGA
- Protein Sequence
- MTSQHYCLRWNNYQSNMTSVFHQLLRNEDFVDVTLACDDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPHDVSFSDLKFIIDFVYKGEIDVSQTELQSLLKTADQLRIKGLCESSNKEDNPEFEHFHSSNVTRIRKSTHLRHQDSVPDDGRPEKVRKLATPKLEEFEVGERATDEAGNDEMPVNSDAATHYRVDPERRTPLNMSSQGLLAGQTLFSHFGVDTDDFPPEPPAPSAIPVGHVDMDHSPTRTLLNSGSIHRTDISDSKYEIKKEAIDIKFETLRSYDQDSLLEMDSHNSRMSGADLSRDSHDDQDQSMHSMLVTPELMGMVPGVSSRSEDTMNGSGDMLMGKSSSDTSRNHTGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESENLEGNTDSNSHLEVAFGMDYANPHTHQQIQYQNQTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415795;
- 90% Identity
- iTF_00349400;
- 80% Identity
- iTF_00764871;