Hhal003114.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Halyomorpha halys
Gene Symbol
-
Assembly
GCA_000696795.2
Location
NW:44569-61390[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00026 0.011 15.7 1.4 2 23 631 654 630 654 0.93
2 16 0.011 0.46 10.6 2.4 2 22 747 767 747 770 0.90
3 16 0.13 5 7.3 2.1 1 23 834 858 834 858 0.97
4 16 0.0069 0.27 11.3 1.0 1 19 914 932 914 934 0.97
5 16 0.036 1.4 9.0 0.3 3 23 976 997 974 997 0.94
6 16 0.00083 0.033 14.1 2.6 1 23 1029 1051 1029 1051 0.98
7 16 0.89 36 4.6 4.3 1 23 1055 1077 1055 1077 0.92
8 16 0.19 7.6 6.7 5.6 3 21 1088 1106 1087 1107 0.95
9 16 3.9e-05 0.0015 18.3 1.3 1 23 1117 1140 1117 1140 0.96
10 16 0.0066 0.26 11.3 0.7 2 20 1204 1222 1203 1226 0.92
11 16 0.0016 0.064 13.2 1.6 2 21 1253 1272 1252 1273 0.94
12 16 0.032 1.3 9.2 1.2 2 21 1400 1419 1399 1420 0.94
13 16 4.8 1.9e+02 2.3 0.0 2 20 1515 1533 1515 1535 0.84
14 16 0.66 26 5.0 0.7 2 12 1548 1558 1547 1563 0.86
15 16 0.002 0.079 13.0 0.4 3 23 1602 1622 1601 1622 0.97
16 16 0.0026 0.1 12.6 3.5 2 23 1698 1719 1697 1719 0.96

Sequence Information

Coding Sequence
ATGGAAGTTCGCAAAAATGTTGATGGAGCTTGTCGTCTCTGCCTTCATGGAGAAGGAAGGATATcagtttttgaagaaaatccAAAATGTTCCATATCACcagaaagtatttataattgtgtTTCTGTAAAGataacCAAAGAAGACAGATTACCTAAAAGCatctgtgaaaactgtatatctAATGTTAAAAGTTGGTGTGTATTCAAAGATACTTGCGACAAAACGCAAGAAACTTTGAATGAATGGCTAAATTGCAATGGACTCAGTGGTGATGTCAAAGAGgTAGAAGACGACAcatcaaagaaattatttaatagtacaaCTGTTAAGtcttatgaaataaatcatGGAAGTGAAAATTCTTCTCTTCCAATCTTGGTATTACCTGAAGTGGTGGAATCAGGTATATGCCTTGATGAAAATAAGAAAGTTGGGAAAACATCATCGGATACACCTAGACATTTTTCGGAGGAAAGAACAGGTGAAATTTCAAGCACCTTATCTACTGACGAAGAGAATAAACAATCTTCAGTTGTCAGTTCAACAAAAGAGATCGCAGATTCTTGCCAAGATAATAATGGAAGCAGTTTAAGTGATAGCatggaaattgaaaatgttgaatCTCATAATATTCCTAAAGGTTTCCTAAAAACAACTGAATCAGTTATGGCATTATGTAATGAATTACAAgaaaattttcagaataaaGAGCTATCTAATTCTATTGAGCCAATGGAAGTAACTTCCAATGAAGTTGACGATGCCTTCCCTAAAATTTCACAACCTACCAGATCCGATAATTTATcttctaatgaaataaatgattgcTTCTCAGCTATAAACAGTTCTGTTGATGCAGTGGAGGCAATCTTAGAAAGTTCTTCTCATGTagagaaagtaaataatatggAATGTGTTGAGTCCAATCCTAATTCAATGGACACAAGGGACTTGAAAAGTTCTCAGAGTGGAGTGgaacttattaatatttcagagGCAAACAAATGTCTAGATGTCAGGTTAAATGAAACTGCTAGCCTCATTGAGGCATCTTCATCTGAAAAAGTCCGATGTGCAACAACAGAATCTCCAGATTCAGCAGCCAACAATGTCAGTGAGGATTCTAGGATAAAAGTATCGGGCAATAAAGTTATTCCTGATACTACAACAGAACCTTTGCCAAAAGAAGATGAAGTACCAAAGAATGATCCTTCTCCTGATTCAGACAAAGAAAATTCTACTCCTAACTCAGCTACTCCAGCCAATGATATTTCCAAAGAAAAGCAGAAAGGCCCAGAATCACTTGAAACATCAATCGAAGGAGAAAACCAATCACTTTCTGGATTGAGAATTGAGTCCATTTCGACTTTGACTTTTGAAAGCTCGGAACTTTTCGATACCCAAGAAGGTAAAACAAGTTCTGAAAGTAATACTACTGCAGAGCCTGTTGAAAAAGTTGCTGAATCTAAAACCAATGAAAGTTCTGACCCCCCTGCTGTGGATGGTTCTAGTTCAGGAAATAGTGATAAAAGTGCACCCGCGATGGGACAAATAGCGGAACCTGAGGTCATTTCTGAACAGTTAAGTAATCCATCCTCTGCACAAGGTACTATCACCGATGAAGATAGGTTGGAAATAAATGTGAATGACCATCTAGAAGTGGAGATGAATAGCAGGGCTGATCCTGACCAGGACATTAATTTTTCGCAAGATAtggtacaaaacattaaacaagAACCAATAGATACTCATGAAACAATGCCTTCTGGCCATACCGATCCGATTTATCCTATAAGGGTAAAATCGGAATTCAGCTCTTACAACTTTGATGATACCAGTGATGATGTTGGATTAAATCATCCCTCTGTCTCTGGGCaagaaatcaataaatgtgatatctgtaatagaaaatattcttcTTTGTCAAATTATCTTAAACATCTGCAAACCAAAGTTCATTTGTACAATGCTTCATTAGAACCTGGAGAAAACTTAGCGCTAGCTAATGAGGGAACGTCATCAGATTATCTTGATTCTAGGATGAATTATTCAGATACCTATTCAGAGGATTCTAGACTTAGTGCATATTCTAATGACTCTCCTATGCTTCGCTCTAGGCTTTCTGAAGATTATATGCAGCCTTCAATAAACAGGTATCAACACTCCCTGGTTCGGCAAGCACAGCCTAGGTTACCTTACCCTTCATCTGTTAGTAAATTACCcagaaataaagagaaatgtaaattatgtaatacaaGATTCACATATATATCTGAGATGCGGAGGCATTTACTTTCCAAAAAACATAGGGATAATGAACGTTTGATGCGAGATAATGATCAAATGATGCGAGAAAATGAGCAATTGATAAGGATAAGTGAGCAAATGTTTAGGGAAAAAGAACGATACAGGAGAGAAAGGGCTTTGATGTATTCTAGAACTAAGAACACAGTTGATGAAACACCACAATTACAGCCTGAACCGACCCTATCTCCATTCATATGTCCTATTGAAAATTGTCATTATTCCTGTCAAAAAGGGGATCGACTGTTGGCTCATATGAGAACACATGGTATCGGACAGCCTGCTGTAGCTCCCTCACCACAAGTTATGAGAGAATCTGATAGTAAGCCGAAATTGAGTCTGAGGCAACAGGAATTACTTAAAAAAGAGTTAGAAAAACGAAAATCTAATGTTTTTGGTGAACAAATTGTTGTTGAACCATTGATTCATGATTACAAATGTGATGGTTGTAGTAAGACATTCCTTCGAGAGAGTGGTCTTAAGAAACACAGCTACTACTGTTCACAAGTTATTGCTAATCAGCAAGAGGATGAAGATGATGAAGAAGaggaagaggaagaagaacCACCAAAATTATCTGATAATATCCCTGATAacttacaaataaagaaaatgcacTGCCCAATATGTAATCTGACATTTGCTGCTAAAAGTGTATTTATCAGCCATGTTCAAATTTATCACAAAGGATCTACATTGGAAAGTGGGCTTTTTAGACCGAAGAAGACTGTTATCAAATCGAATAAATTACGTGTTAAGAGCAGAAAAGGCCATGGTTATGTCTGCAATCATTGTGGTAAAAAGTTCAAcctcttatcctcattgaattTCCATTTAAAGGTTCATACTACCaaacatatttgtaaaatttgtaaGAAAGGGTATGACTCTCGTAGGGCTTTTATGGATCACTGTCGATTGCATTTCTTACCTCCTGGCTCAAAACAGACATTATGTCATAAATGTTTTAGAGTCTTCAAAACAAGAGCAGAGTTTTCTCACCATCGAAAACATGATATGTGCTCTATCAAACTAAAAATCTATACATGTAATATTTGTCAACATTCATTCAAAGATCCTTCAGCTTTAGAAGAGCATAAAATCAGGTTTCATAATGATGTACTTGATGTTTCAGAAGATGAAGAAACTCCATCTATGAATCGTAGGCcaatagtacaaaatttacCCATCAATCGTCAGAATTTCAATACTGTTAATGAAAACCGCCCTGGAACCTCATCCAAATATCACTCTTCTAATATAAATCAGTCTTCTAATTCGGCAAGGACTGATCCAATTTTGCATTGTGATGTTTGCGATAGAGATTATGCCACTTTAGCTTCATTGAAAAAACACATGTGGAAATATCATCAAACAAGACCAGTGTTAAATCGGCCAGTAGAAgttaagaaaaagaatattcttAAACCTAATGTTTCTAAATGTTGGAAATGTAAACACTGTAGAAGGGTGTTTAACAACAGAAGAATGCTTGTTGTCCATTtgaaaaaatgcaaatataatGCTTTCGAATTAGAAGATGGAATGTGTTTGCAATGTGGAAAATGGTGTGAATCGGGAAAATCTAGAATCTGTAGGTTTTGTCTCCCTGACTTAATTAAAGCTCCGAAGGTCAAAAAAAGTTTACCTGAATCAAACTTTTTGGTGACACCAAAGTCAGAATACATAATGAATCCAAAGCAAGAAGTAAATTCAGCTCCAGCCAGAATACTGAATCCCGGTTTCCCAGGTACATTTCCTAAAACCAAAGCAAGTACACCTGCTATAAAGGGGATACGCCTTATGAAGTGCCCTGTTGGTAACAAGTATTTTAGGAGTGAACTGTTGATGATCAAGCACTATTCTCAATGTGATGGTAGCTGCGAGAATCGTTGCAGCCATTGCAGAAAACTCTTCAATTCTCCCAAAGAGTATAGAGTTCACTTATTAAACAGTAAGTGTTATGGGCACAACAGGTCTCAGACCAAAGCCAGTAGTAGCAAGTTACCCTTGAAGAGAGAAGTTCAGGTGAAGAGAGAAGTTCTTCCAGTACCAGACTATTCTCGCGAGAGATATGTTGTCAAAAACAGTCTGGCCGATGGAGAAATATCTGCTGAGGTGAGCATGATGGACAGTAGCATTTCTGAAGACAGTAGTATGATAGAATTGGACTCGTCTATGTTAAATGAGCCTTCCAATAAAATAGCTGAAGAAAAGTCAATAAAAATGGGAAGGGTTTGCACAATTTGTAATAAAGTTATAGCAATGCAAAGAGGTGTCTATCGTCATGTTTacagttgttttaaaattaacatgctTTCTCAAGAGAGTGTATcatgtaaaaaatgtaatagaacGTTCAGTAAACATTTATCTATGAAGGAAAATACTGCTGCGATAAAGCAACATATACTTGACTGTCATTATATTCCCTACTATGAAGGAGAAGGACTTCTAGAAGACGGGAGCCCTTCGGAAGTCCCTCCTCCACTGTTGTGTTATGTTTGTTCTTTTGGCTTCTCTAGTAATGAAAGTCTTAGACGACACATTTTGGAACACAGGAGTAGGAAAGATGAAGTAAACAACATTGTTCTCCTTCTAGAAGCTGAACTCTTTTCGGAAAGGATACTAAATTCTGAAACACTTTGCTATAACATTCAGATACAACCAGAAAGCACTGAAACTTTATCTTCTCTACCAGTAAGAAAGAACAATGTATTACGTTTCAAAGTCCCCGGGATGCACAGTTTGGAACCACGAAAAGTAGTCAGAAAAAAGCTCCTGGAATGTGAGAAGTGCAGCAGGAAGTTTACCAATCGCAATAAATTCTTAAGGCATAAGAAAGTTCATGGGATTGTTACTCAAAGTGTGTTTCATGAGGTTTCTGAAAACTATTTGGATTTCATTGCTGATCATGCACAACCACAACCGCAGCTGCAACCAGAACTAGAACCCGAACTAGAACCAGAGCCAGAACTAGAACCAGAGCCAGAACCAGAACTAGAACCGCAACCAGAACCAGAACCACAACCGCAGCCACTTCCACAATCCACACCTCAACCAGAACCAATGCCACTTCCACCACccgataattaa
Protein Sequence
MEVRKNVDGACRLCLHGEGRISVFEENPKCSISPESIYNCVSVKITKEDRLPKSICENCISNVKSWCVFKDTCDKTQETLNEWLNCNGLSGDVKEVEDDTSKKLFNSTTVKSYEINHGSENSSLPILVLPEVVESGICLDENKKVGKTSSDTPRHFSEERTGEISSTLSTDEENKQSSVVSSTKEIADSCQDNNGSSLSDSMEIENVESHNIPKGFLKTTESVMALCNELQENFQNKELSNSIEPMEVTSNEVDDAFPKISQPTRSDNLSSNEINDCFSAINSSVDAVEAILESSSHVEKVNNMECVESNPNSMDTRDLKSSQSGVELINISEANKCLDVRLNETASLIEASSSEKVRCATTESPDSAANNVSEDSRIKVSGNKVIPDTTTEPLPKEDEVPKNDPSPDSDKENSTPNSATPANDISKEKQKGPESLETSIEGENQSLSGLRIESISTLTFESSELFDTQEGKTSSESNTTAEPVEKVAESKTNESSDPPAVDGSSSGNSDKSAPAMGQIAEPEVISEQLSNPSSAQGTITDEDRLEINVNDHLEVEMNSRADPDQDINFSQDMVQNIKQEPIDTHETMPSGHTDPIYPIRVKSEFSSYNFDDTSDDVGLNHPSVSGQEINKCDICNRKYSSLSNYLKHLQTKVHLYNASLEPGENLALANEGTSSDYLDSRMNYSDTYSEDSRLSAYSNDSPMLRSRLSEDYMQPSINRYQHSLVRQAQPRLPYPSSVSKLPRNKEKCKLCNTRFTYISEMRRHLLSKKHRDNERLMRDNDQMMRENEQLIRISEQMFREKERYRRERALMYSRTKNTVDETPQLQPEPTLSPFICPIENCHYSCQKGDRLLAHMRTHGIGQPAVAPSPQVMRESDSKPKLSLRQQELLKKELEKRKSNVFGEQIVVEPLIHDYKCDGCSKTFLRESGLKKHSYYCSQVIANQQEDEDDEEEEEEEEPPKLSDNIPDNLQIKKMHCPICNLTFAAKSVFISHVQIYHKGSTLESGLFRPKKTVIKSNKLRVKSRKGHGYVCNHCGKKFNLLSSLNFHLKVHTTKHICKICKKGYDSRRAFMDHCRLHFLPPGSKQTLCHKCFRVFKTRAEFSHHRKHDMCSIKLKIYTCNICQHSFKDPSALEEHKIRFHNDVLDVSEDEETPSMNRRPIVQNLPINRQNFNTVNENRPGTSSKYHSSNINQSSNSARTDPILHCDVCDRDYATLASLKKHMWKYHQTRPVLNRPVEVKKKNILKPNVSKCWKCKHCRRVFNNRRMLVVHLKKCKYNAFELEDGMCLQCGKWCESGKSRICRFCLPDLIKAPKVKKSLPESNFLVTPKSEYIMNPKQEVNSAPARILNPGFPGTFPKTKASTPAIKGIRLMKCPVGNKYFRSELLMIKHYSQCDGSCENRCSHCRKLFNSPKEYRVHLLNSKCYGHNRSQTKASSSKLPLKREVQVKREVLPVPDYSRERYVVKNSLADGEISAEVSMMDSSISEDSSMIELDSSMLNEPSNKIAEEKSIKMGRVCTICNKVIAMQRGVYRHVYSCFKINMLSQESVSCKKCNRTFSKHLSMKENTAAIKQHILDCHYIPYYEGEGLLEDGSPSEVPPPLLCYVCSFGFSSNESLRRHILEHRSRKDEVNNIVLLLEAELFSERILNSETLCYNIQIQPESTETLSSLPVRKNNVLRFKVPGMHSLEPRKVVRKKLLECEKCSRKFTNRNKFLRHKKVHGIVTQSVFHEVSENYLDFIADHAQPQPQLQPELEPELEPEPELEPEPEPELEPQPEPEPQPQPLPQSTPQPEPMPLPPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01298656;
90% Identity
-
80% Identity
-